Dear experts,
I have single shell dti data B0, B1000, 20 directions with four B0 on mouse data. I ran preprocessing in mrtrix and was following the instructions here for 3 tissue estimation https://3tissue.github.io/doc/ss3t-csd.html . I also averaged the response functions for each tissue across all subjects using response mean. After running SS3T-CSD method I received the following error and no fods were created "ERROR] Signal decay metric (SDM) ordering should be: SDM(SF WM) < SDM(GM) < SDM(CSF)." A screenshot of the output is below. Any help would be appreciated!
-Anna
#!/bin/bash
Dear experts,
I have single shell dti data B0, B1000, 20 directions with four B0 on mouse data. I ran preprocessing in mrtrix and was following the instructions here for 3 tissue estimation https://3tissue.github.io/doc/ss3t-csd.html . I also averaged the response functions for each tissue across all subjects using response mean. After running SS3T-CSD method I received the following error and no fods were created "ERROR] Signal decay metric (SDM) ordering should be: SDM(SF WM) < SDM(GM) < SDM(CSF)." A screenshot of the output is below. Any help would be appreciated!
-Anna
#!/bin/bash