ACCESS-MOPPy/.github/workflows/ci.yml at main · ACCESS-NRI/ACCESS-MOPPy · GitHub

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name: CI

on:
  pull_request:
    branches: [main]
  push:
    branches: [main]
  workflow_dispatch:
    inputs:
      test_suite:
        description: 'Which test suite to run'
        required: true
        default: 'unit'
        type: choice
        options:
        - unit
        - integration
        - all

jobs:
  pre-commit:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v7.0.0
        with:
          submodules: recursive
      - uses: prefix-dev/setup-pixi@v0.10.0
        with:
          pixi-version: latest
      - name: Run pre-commit
        run: pixi run -e dev pre-commit run --all-files

  test:
    name: Test
    runs-on: ubuntu-latest

    steps:
      - name: Checkout source
        uses: actions/checkout@v7.0.0
        with:
          submodules: recursive

      - name: Setup pixi
        uses: prefix-dev/setup-pixi@v0.10.0
        with:
          pixi-version: latest
          environments: test

      - name: Refresh CMIP7 vocabularies to latest upstream
        run: |
          git -C src/access_moppy/vocabularies/cmip7-cmor-tables fetch origin main
          git -C src/access_moppy/vocabularies/cmip7-cmor-tables checkout --detach FETCH_HEAD

      - name: Create default config file
        run: |
          mkdir -p ~/.moppy
          cat <<EOF > ~/.moppy/user.yml
          creator_name: "CI Bot"
          organisation: "ACCESS-NRI"
          creator_email: "ci@example.com"
          creator_url: "https://example.com"
          EOF

      - name: List installed packages
        run: pixi list -e test

      - name: Run smoke and unit tests (automatic)
        if: github.event_name != 'workflow_dispatch'
        run: pixi run -e test pytest tests/test_smoke.py tests/unit --cov=access_moppy --cov-config=.coveragerc --cov-report=xml

      - name: Run unit tests only (manual)
        if: github.event_name == 'workflow_dispatch' && github.event.inputs.test_suite == 'unit'
        run: pixi run -e test pytest tests/test_smoke.py tests/unit --cov=access_moppy --cov-config=.coveragerc --cov-report=xml

      - name: Run integration tests only (manual)
        if: github.event_name == 'workflow_dispatch' && github.event.inputs.test_suite == 'integration'
        run: pixi run -e test pytest tests/integration --cov=access_moppy --cov-config=.coveragerc --cov-report=xml

      - name: Run all tests (manual)
        if: github.event_name == 'workflow_dispatch' && github.event.inputs.test_suite == 'all'
        run: pixi run -e test pytest tests --cov=access_moppy --cov-config=.coveragerc --cov-report=xml

      - name: Upload code coverage
        uses: codecov/codecov-action@v7
        with:
          token: ${{ secrets.codecov_token }}
          files: ./coverage.xml
          flags: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.test_suite || 'unit' }}