feat: support LoRA training and conversion using NNX and Qwix

Author: RexBearIU

docs/_static/js/editable_commands.js

@@ -7,28 +7,39 @@ document.addEventListener('DOMContentLoaded', () => {
   const codeBlocks = document.querySelectorAll('div.highlight-sh pre, div.highlight-bash pre, div.highlight-default pre');
 
   const placeholders = [
+    "<BASE_OUTPUT_DIRECTORY>",
     "<BATCH_SIZE_PER_DEVICE>",
     "<CHIPS_PER_VM>",
     "<CKPT_PATH>",
     "<CLUSTER_NAME>",
     "<DATA_COLUMNS>",
     "<DATASET_NAME>",
     "<DATASET_PATH>",
+    "<DTYPE>",
     "<GCS_BUCKET>",
     "<HF_CKPT_PATH>",
+    "<HF_LORA_ADAPTER_PATH>",
     "<HF_MODEL>",
     "<HF_TOKEN>",
     "<IMAGE_NAME>",
     "<LAZY_LOAD>",
+    "<LEARNING_RATE>",
+    "<LORA_ALPHA>",
+    "<LORA_RANK>",
+    "<LORA_RESTORE_PATH>",
+    "<MAX_TARGET_LENGTH>",
+    "<MAXTEXT_MODEL>",
     "<MODEL_NAME>",
     "<NUM_SLICES>",
     "<POD_NAME>",
+    "<PRE_TRAINED_MODEL_CKPT_PATH>",
     "<PROJECT_ID>",
     "<RUN_NAME>",
     "<STEPS>",
     "<TPU_TYPE>",
     "<TRAIN_SPLIT>",
     "<VENV_NAME>",
+    "<WEIGHT_DTYPE>",
     "<ZONE>"
   ];
 

docs/tutorials/posttraining/lora.md

@@ -0,0 +1,221 @@
+<!--
+ Copyright 2023–2026 Google LLC
+
+ Licensed under the Apache License, Version 2.0 (the "License");
+ you may not use this file except in compliance with the License.
+ You may obtain a copy of the License at
+
+      https://www.apache.org/licenses/LICENSE-2.0
+
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+ -->
+
+# LoRA Fine-tuning on single-host TPUs
+
+**Low-Rank Adaptation (LoRA)** is a Parameter-Efficient Fine-Tuning (PEFT) technique designed to optimize large language models while minimizing resource consumption.
+
+Unlike traditional full-parameter fine-tuning, LoRA:
+
+- **Freezes the pre-trained model weights**, preserving the original knowledge.
+- **Injects trainable rank decomposition matrices** into the Transformer layers.
+
+This approach **greatly reduces the number of trainable parameters** required for downstream tasks, making the process faster and more memory-efficient.
+
+This tutorial provides step-by-step instructions for setting up the environment and performing LoRA fine-tuning on a Hugging Face dataset using MaxText.
+
+We use [Tunix](https://github.com/google/tunix), a JAX-based library, to power these post-training tasks.
+
+In this tutorial we use a single host TPU VM such as `v6e-8/v5p-8`. Let's get started!
+
+**Note:** Since **qwix** support has been recently integrated into the **main branch**, you must **clone** the latest source code and install it in **editable mode** to ensure all dependencies are correctly linked.
+
+```sh
+# Install Qwix from source
+git clone https://github.com/google/qwix.git
+cd qwix
+uv pip install -e .
+```
+
+## Setup environment variables
+
+Set the following environment variables before running LoRA Fine-tuning.
+
+```sh
+# -- Model configuration --
+export PRE_TRAINED_MODEL=<MAXTEXT_MODEL> # e.g., 'gemma3-4b'
+
+# -- MaxText configuration --
+export BASE_OUTPUT_DIRECTORY=<BASE_OUTPUT_DIRECTORY> # e.g., gs://my-bucket/my-output-directory or /path/to/my-output-directory
+export RUN_NAME=<RUN_NAME> # e.g., $(date +%Y-%m-%d-%H-%M-%S)
+export STEPS=<STEPS> # e.g., 1000
+export PER_DEVICE_BATCH_SIZE=<BATCH_SIZE_PER_DEVICE> # e.g., 1
+export HF_TOKEN=<HF_TOKEN>
+export LORA_RANK=<LORA_RANK> # e.g., 16
+export LORA_ALPHA=<LORA_ALPHA> # e.g., 32.0
+export LEARNING_RATE=<LEARNING_RATE> # e.g., 3e-6
+export MAX_TARGET_LENGTH=<MAX_TARGET_LENGTH> # e.g., 1024
+export WEIGHT_DTYPE=<WEIGHT_DTYPE> # e.g., bfloat16
+export DTYPE=<DTYPE> # e.g., bfloat16
+
+# -- Dataset configuration --
+export DATASET_NAME=<DATASET_NAME> # e.g., openai/gsm8k
+export TRAIN_SPLIT=<TRAIN_SPLIT> # e.g., train
+export HF_DATA_DIR=<DATASET_PATH> # e.g., main
+export TRAIN_DATA_COLUMNS=<DATA_COLUMNS> # e.g., ['question','answer']
+
+# -- LoRA Conversion configuration (Optional) --
+export HF_LORA_ADAPTER_PATH=<HF_LORA_ADAPTER_PATH> # e.g., 'username/adapter-name'
+```
+
+## Customizing Trainable Layers (Optional)
+
+By default, MaxText determines which layers to apply LoRA to based on the model's architecture by reading `src/maxtext/configs/post_train/lora_module_path.yml`.
+
+If you need to fine-tune specific components (e.g., targeting only Attention layers to optimize memory usage), you can override these defaults through the following hierarchy:
+
+### Configuration Hierarchy
+
+1. **Command Line Argument**: Pass the `lora_module_path` argument directly in your training command. This is the most flexible way for experimental iterations.
+2. **Task-Specific Config (`sft.yml`)**: Define the `lora_module_path` parameter in `src/maxtext/configs/post_train/sft.yml` to set a persistent configuration for your SFT runs.
+3. **Global Defaults**: Automatic detection via the model-to-regex mapping defined in `lora_module_path.yml`.
+
+## Get your model checkpoint
+
+This section explains how to prepare your model checkpoint for use with MaxText. You have two options: using an existing MaxText checkpoint or converting a Hugging Face checkpoint.
+
+### Option 1: Using an existing MaxText checkpoint
+
+If you already have a MaxText-compatible model checkpoint, simply set the following environment variable and move on to the next section.
+
+```sh
+export PRE_TRAINED_MODEL_CKPT_PATH=<PRE_TRAINED_MODEL_CKPT_PATH> # e.g., gs://my-bucket/my-model-checkpoint/0/items or /path/to/my-model-checkpoint/0/items
+```
+
+### Option 2: Converting a Hugging Face checkpoint
+
+Refer to the steps in [Hugging Face to MaxText](https://maxtext.readthedocs.io/en/maxtext-v0.2.1/guides/checkpointing_solutions/convert_checkpoint.html#hugging-face-to-maxtext) to convert a hugging face checkpoint to MaxText. Make sure you have the correct checkpoint files converted and saved. Similar as Option 1, you can set the following environment and move on.
+
+```sh
+export PRE_TRAINED_MODEL_CKPT_PATH=<PRE_TRAINED_MODEL_CKPT_PATH> # e.g., gs://my-bucket/my-model-checkpoint/0/items or /path/to/my-model-checkpoint/0/items
+```
+
+## Run a Fresh LoRA Fine-Tuning on Hugging Face Dataset
+
+Once your environment variables and checkpoints are ready, you can start the LoRA fine-tuning process.
+
+Execute the following command to begin training:
+
+```sh
+python3 -m maxtext.trainers.post_train.sft.train_sft \
+    run_name="${RUN_NAME?}" \
+    base_output_directory="${BASE_OUTPUT_DIRECTORY?}" \
+    model_name="${PRE_TRAINED_MODEL?}" \
+    load_parameters_path="${PRE_TRAINED_MODEL_CKPT_PATH?}" \
+    hf_access_token="${HF_TOKEN?}" \
+    hf_path="${DATASET_NAME?}" \
+    train_split="${TRAIN_SPLIT?}" \
+    hf_data_dir="${HF_DATA_DIR?}" \
+    train_data_columns="${TRAIN_DATA_COLUMNS?}" \
+    steps="${STEPS?}" \
+    per_device_batch_size="${PER_DEVICE_BATCH_SIZE?}" \
+    max_target_length="${MAX_TARGET_LENGTH?}" \
+    learning_rate="${LEARNING_RATE?}" \
+    weight_dtype="${WEIGHT_DTYPE?}" \
+    dtype="${DTYPE?}" \
+    enable_nnx=True \
+    pure_nnx_decoder=True \
+    enable_lora=True \
+    lora_rank="${LORA_RANK?}" \
+    lora_alpha="${LORA_ALPHA?}" \
+    scan_layers=True
+```
+
+Your fine-tuned model checkpoints will be saved here: `$BASE_OUTPUT_DIRECTORY/$RUN_NAME/checkpoints`.
+
+## (Optional) Resume from a previous LoRA checkpoint
+
+If you want to resume training from a previous run or further fine-tune an existing LoRA adapter, you can specify the LoRA checkpoint path.
+
+### Step 1: Convert HF LoRA adapter to MaxText format
+
+If your LoRA adapter is currently in Hugging Face format, you must convert it to MaxText format before it can be loaded. Use the integrated conversion utility:
+
+```sh
+python3 -m maxtext.checkpoint_conversion.to_maxtext \
+    maxtext/src/maxtext/configs/base.yml \
+    model_name="${PRE_TRAINED_MODEL?}" \
+    hf_lora_adapter_path="${HF_LORA_ADAPTER_PATH?}" \
+    base_output_directory="${BASE_OUTPUT_DIRECTORY?}/converted_adapter" \
+    hf_access_token="${HF_TOKEN?}" \
+    hardware=cpu skip_jax_distributed_system=True \
+    scan_layers=True
+```
+
+### Step 2: Set the restore path
+
+Point `LORA_RESTORE_PATH` to the converted MaxText adapter directory (the directory containing the `0/items` or Orbax files).
+
+- **load_parameters_path**: Points to the frozen base model weights (the original model).
+- **lora_restore_path**: Points to the previous LoRA adapter weights you wish to load.
+
+```sh
+export LORA_RESTORE_PATH=<LORA_RESTORE_PATH> # e.g., gs://my-bucket/run-1/checkpoints/0/items or /path/to/run-1/checkpoints/0/items
+```
+
+### Step 3: Run LoRA Fine-Tuning with the Restore Path
+
+Once your environment variables and checkpoints are ready, you can start the LoRA fine-tuning process.
+
+Execute the following command to begin training:
+
+```sh
+python3 -m maxtext.trainers.post_train.sft.train_sft \
+    run_name="${RUN_NAME?}" \
+    base_output_directory="${BASE_OUTPUT_DIRECTORY?}" \
+    model_name="${PRE_TRAINED_MODEL?}" \
+    load_parameters_path="${PRE_TRAINED_MODEL_CKPT_PATH?}" \
+    lora_restore_path="${LORA_RESTORE_PATH}" \
+    hf_access_token="${HF_TOKEN?}" \
+    hf_path="${DATASET_NAME?}" \
+    train_split="${TRAIN_SPLIT?}" \
+    hf_data_dir="${HF_DATA_DIR?}" \
+    train_data_columns="${TRAIN_DATA_COLUMNS?}" \
+    steps="${STEPS?}" \
+    per_device_batch_size="${PER_DEVICE_BATCH_SIZE?}" \
+    max_target_length="${MAX_TARGET_LENGTH?}" \
+    learning_rate="${LEARNING_RATE?}" \
+    weight_dtype="${WEIGHT_DTYPE?}" \
+    dtype="${DTYPE?}" \
+    enable_nnx=True \
+    pure_nnx_decoder=True \
+    enable_lora=True \
+    lora_rank="${LORA_RANK?}" \
+    lora_alpha="${LORA_ALPHA?}" \
+    scan_layers=True
+```
+
+Your fine-tuned model checkpoints will be saved here: `$BASE_OUTPUT_DIRECTORY/$RUN_NAME/checkpoints`.
+
+## (Optional) Convert Fine-tuned LoRA to Hugging Face Format
+
+After completing the fine-tuning process, your LoRA weights are stored in MaxText/Orbax format. To use these weights with the Hugging Face ecosystem (e.g., for inference or sharing), convert them back using the `to_huggingface.py` script.
+
+```sh
+python3 -m maxtext.checkpoint_conversion.to_huggingface \
+    maxtext/src/maxtext/configs/base.yml \
+    model_name="${PRE_TRAINED_MODEL?}" \
+    lora.lora_restore_path="${BASE_OUTPUT_DIRECTORY?}/${RUN_NAME?}/checkpoints/<STEPS>/model_params" \
+    base_output_directory="${BASE_OUTPUT_DIRECTORY?}/hf_lora_adapter" \
+    hf_access_token="${HF_TOKEN?}" \
+    lora.lora_rank="${LORA_RANK?}" \
+    lora.lora_alpha="${LORA_ALPHA?}" \
+    scan_layers=True
+```
+
+- `lora.lora_restore_path`: Point this to the specific checkpoint directory (e.g., `.../checkpoints/1000/items`) that you want to export.
+- `base_output_directory`: The local or GCS directory where the Hugging Face `adapter_model.safetensors` and `adapter_config.json` will be saved.
+- `lora.lora_rank` / `lora.lora_alpha`: Must match the values used during the training phase to ensure the `adapter_config.json` is generated correctly.

pytest.ini

@@ -14,6 +14,7 @@ addopts =
     --ignore=tests/unit/gemma3_layers_test.py
     --ignore=tests/unit/gpt_vs_reference_test.py
     --ignore=tests/unit/llama4_layers_test.py
+    --ignore=tests/unit/hf_checkpoint_conversion_test.py
     --ignore=tests/unit/yarn_vs_reference_test.py
     --ignore=tests/unit/moba_vs_reference_test.py
     --ignore=tests/unit/offline_engine_test.py

src/dependencies/requirements/generated_requirements/tpu-post-train-requirements.txt

@@ -251,6 +251,7 @@ parso>=0.8.6
 partial-json-parser>=0.2.1.1.post7
 pathspec>=0.12.1
 pathwaysutils>=0.1.7
+peft>=0.19.1
 perfetto>=0.16.0
 pexpect>=4.9.0
 pillow>=12.0.0
@@ -303,7 +304,7 @@ pytype>=2024.10.11
 pytz>=2025.2
 PyYAML>=6.0.3
 pyzmq>=27.1.0
-qwix>=0.1.4
+qwix>=0.1.6
 ray>=2.54.0
 referencing>=0.37.0
 regex>=2025.11.3