Regenerate test models

dweindl · dweindl · commit 1fcaa3ad262e · 2026-02-26T11:13:53.000+01:00
diff --git a/models/model_calvetti_py/CMakeLists.txt b/models/model_calvetti_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_calvetti_py/model_calvetti_py.h b/models/model_calvetti_py/model_calvetti_py.h
@@ -533,15 +533,15 @@ class Model_model_calvetti_py : public amici::Model_DAE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_calvetti_py/setup.py b/models/model_calvetti_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_dirac_py/CMakeLists.txt b/models/model_dirac_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_dirac_py/model_dirac_py.h b/models/model_dirac_py/model_dirac_py.h
@@ -520,15 +520,15 @@ class Model_model_dirac_py : public amici::Model_ODE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_dirac_py/model_dirac_py/model_dirac_py.py b/models/model_dirac_py/model_dirac_py/model_dirac_py.py
@@ -1,5 +1,5 @@
 # This file was automatically generated by SWIG (https://www.swig.org).
-# Version 4.4.0
+# Version 4.4.1
 #
 # Do not make changes to this file unless you know what you are doing - modify
 # the SWIG interface file instead.
diff --git a/models/model_dirac_py/setup.py b/models/model_dirac_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_events_py/CMakeLists.txt b/models/model_events_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_events_py/model_events_py.h b/models/model_events_py/model_events_py.h
@@ -555,15 +555,15 @@ class Model_model_events_py : public amici::Model_ODE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_events_py/setup.py b/models/model_events_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_jakstat_adjoint_py/CMakeLists.txt b/models/model_jakstat_adjoint_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_jakstat_adjoint_py/model_jakstat_adjoint_py.h b/models/model_jakstat_adjoint_py/model_jakstat_adjoint_py.h
@@ -528,15 +528,15 @@ class Model_model_jakstat_adjoint_py : public amici::Model_ODE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_jakstat_adjoint_py/setup.py b/models/model_jakstat_adjoint_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_nested_events_py/CMakeLists.txt b/models/model_nested_events_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_nested_events_py/model_nested_events_py.h b/models/model_nested_events_py/model_nested_events_py.h
@@ -528,15 +528,15 @@ class Model_model_nested_events_py : public amici::Model_ODE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_nested_events_py/setup.py b/models/model_nested_events_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_neuron_py/CMakeLists.txt b/models/model_neuron_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_neuron_py/model_neuron_py.h b/models/model_neuron_py/model_neuron_py.h
@@ -550,15 +550,15 @@ class Model_model_neuron_py : public amici::Model_ODE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_neuron_py/setup.py b/models/model_neuron_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_robertson_py/CMakeLists.txt b/models/model_robertson_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_robertson_py/model_robertson_py.h b/models/model_robertson_py/model_robertson_py.h
@@ -512,15 +512,15 @@ class Model_model_robertson_py : public amici::Model_DAE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_robertson_py/setup.py b/models/model_robertson_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,
diff --git a/models/model_steadystate_py/CMakeLists.txt b/models/model_steadystate_py/CMakeLists.txt
@@ -41,7 +41,7 @@ if(DEFINED ENV{AMICI_LDFLAGS})
   link_libraries("$ENV{AMICI_LDFLAGS}")
 endif()
 
-find_package(Amici 1.0.0 REQUIRED HINTS
+find_package(Amici 1.0.1 REQUIRED HINTS
              ${CMAKE_CURRENT_LIST_DIR}/../../build)
 message(STATUS "Found AMICI ${Amici_DIR}")
 set_target_properties(Upstream::amici PROPERTIES
diff --git a/models/model_steadystate_py/model_steadystate_py.h b/models/model_steadystate_py/model_steadystate_py.h
@@ -512,15 +512,15 @@ class Model_model_steadystate_py : public amici::Model_ODE {
      * @return AMICI version string
      */
     std::string get_amici_version() const override {
-        return "1.0.0.dev";
+        return "1.0.1.dev";
     }
 
     /**
      * @brief returns the amici version that was used to generate the model
      * @return AMICI git commit hash
      */
     std::string get_amici_commit() const override {
-        return "2b036e909775bc4645c617839fb23d3ed5f07421";
+        return "39afcefa103c861d4efecc0d15196bab302eba69";
     }
 
     bool has_quadratic_llh() const override {
diff --git a/models/model_steadystate_py/model_steadystate_py/__init__.py b/models/model_steadystate_py/model_steadystate_py/__init__.py
@@ -7,13 +7,13 @@
 import amici
 
 # Ensure we are binary-compatible, see #556
-if "1.0.0.dev" != amici.__version__:
+if "1.0.1.dev" != amici.__version__:
     raise amici.AmiciVersionError(
         f"Cannot use model `model_steadystate_py` in {Path(__file__).parent}, "
-        "generated with amici==1.0.0.dev, "
+        "generated with amici==1.0.1.dev, "
         f"together with amici=={amici.__version__} "
         "which is currently installed. To use this model, install "
-        "amici==1.0.0.dev or re-import the model with the amici "
+        "amici==1.0.1.dev or re-import the model with the amici "
         "version currently installed."
     )
 
diff --git a/models/model_steadystate_py/setup.py b/models/model_steadystate_py/setup.py
@@ -89,7 +89,7 @@ def get_extension() -> CMakeExtension:
     author_email="model-author-todo",
     ext_modules=[MODEL_EXT],
     packages=find_namespace_packages(),
-    install_requires=["amici==1.0.0.dev"],
+    install_requires=["amici==1.0.1.dev"],
     python_requires=">=3.11",
     package_data={},
     zip_safe=False,

Original file line number	Diff line number	Diff line change
`@@ -1,5 +1,5 @@`
`1`	`1`	`# This file was automatically generated by SWIG (https://www.swig.org).`
`2`		`-# Version 4.4.0`
	`2`	`+# Version 4.4.1`
`3`	`3`	`#`
`4`	`4`	`# Do not make changes to this file unless you know what you are doing - modify`
`5`	`5`	`# the SWIG interface file instead.`