Description of a non-surgical procedure performed on a subject
| Field | Type | Title (Description) |
|---|---|---|
start_date |
datetime.date |
Start date |
experimenters |
Optional[List[str]] |
experimenter(s) |
ethics_review_id |
str |
Ethics review ID |
description |
str |
Description |
notes |
Optional[str] |
Notes |
protocol_id |
Optional[str] |
Protocol ID (DOI for protocols.io) |
Injection procedure performed outside of surgery, which may include one or more injections at different locations/depths
| Field | Type | Title (Description) |
|---|---|---|
start_date |
datetime.date |
Start date |
ethics_review_id |
str |
Ethics review ID |
protocol_id |
Optional[str] |
Protocol ID (DOI for protocols.io) |
injections |
List[Injection] | Injections |
notes |
Optional[str] |
Notes |
Description of subject procedures performed at one time
| Field | Type | Title (Description) |
|---|---|---|
start_date |
datetime.date |
Start date |
experimenters |
Optional[List[str]] |
experimenter(s) |
ethics_review_id |
Optional[str] |
Ethics review ID |
animal_weight_prior |
Optional[float] |
Animal weight (g) (Animal weight before procedure) |
animal_weight_post |
Optional[float] |
Animal weight (g) (Animal weight after procedure) |
weight_unit |
MassUnit | Weight unit |
anaesthesia |
Optional[Anaesthetic] | Anaesthesia |
workstation_id |
Optional[str] |
Workstation ID |
coordinate_system |
Optional[CoordinateSystem] | Surgery coordinate system (Only required when the Surgery.coordinate_system is different from the Procedures.coordinate_system) |
measured_coordinates |
Optional[Dict[Origin, Translation]] | Measured coordinates (Coordinates measured during the procedure, for example Bregma and Lambda) |
procedures |
List[CatheterImplant or Craniotomy or ProbeImplant or Headframe or BrainInjection or Injection or MyomatrixInsertion or GenericSurgeryProcedure or Perfusion or SampleCollection] | Procedures |
notes |
Optional[str] |
Notes |
protocol_id |
Optional[str] |
Protocol ID (DOI for protocols.io) |
Description of an animal training protocol
| Field | Type | Title (Description) |
|---|---|---|
training_name |
str |
Training protocol name |
protocol_id |
Optional[str] |
Training protocol ID |
start_date |
datetime.date |
Training protocol start date |
end_date |
Optional[datetime.date] |
Training protocol end date |
curriculum_code |
Optional[Code] | Curriculum code (Code describing the directed graph used for the training curriculum) |
notes |
Optional[str] |
Notes |
Description of a water restriction procedure
| Field | Type | Title (Description) |
|---|---|---|
ethics_review_id |
str |
Ethics review ID |
target_fraction_weight |
int |
Target fraction weight (%) |
target_fraction_weight_unit |
UnitlessUnit | Target fraction weight unit |
minimum_water_per_day |
float |
Minimum water per day (mL) |
minimum_water_per_day_unit |
VolumeUnit | Minimum water per day unit |
baseline_weight |
float |
Baseline weight (g) (Weight at start of water restriction) |
weight_unit |
MassUnit | Weight unit |
start_date |
datetime.date |
Water restriction start date |
end_date |
Optional[datetime.date] |
Water restriction end date |