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found and fixed bug for now
1 parent 0353df6 commit a4d618f

1 file changed

Lines changed: 3 additions & 4 deletions

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src/aind_dynamic_foraging_basic_analysis/metrics/trial_metrics.py

Lines changed: 3 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -244,7 +244,6 @@ def get_average_signal_window(
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channel,
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data_col='data_z',
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output_col=None,
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censor=True
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):
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"""
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Returns a Series with the mean signal in a window around an alignment event,
@@ -293,11 +292,11 @@ def get_average_signal_window(
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)
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df_trials = nwb.df_trials.copy()
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# get event triggered response
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# get event triggered response. Censor set to FALSE because event_times should match trial #
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etr = pf.fip_psth_inner_compute(nwb, nwb.df_trials[alignment_event].values,
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channel=channel, average=False, tw=offsets,
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censor=censor, data_column=data_col)
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censor=False, data_column=data_col)
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avg_activity = etr.groupby("event_number").mean()
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avg_activity['trial'] = df_trials.trial.values

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