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[Testing Arch] Set up ecephys spikesorting pipeline in dev Code Ocean environment #82

@helen-m-lin

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@helen-m-lin

The existing dev spikesorting pipeline does not work/ is out of date. We need to create the pipeline in the test environment and update the ecephys job type in dev.

Prod code ocean link: https://codeocean.allenneuraldynamics.org/capsule/9352933/tree
Prod code ocean released version: https://codeocean.allenneuraldynamics.org/capsule/4364160/tree/v5

  • Clone/re-create production pipeline to dev CO environment. This also involves cloning all downstream capsules to dev environment.
  • Update ecephys dev job type to point to the new pipeline
  • Ensure that output is as expected. We can run a test dataset through this pipeline to check.

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