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update page structure for batch_structure_prediction.md
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pages/activities/batch_structure_prediction.md

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@@ -17,16 +17,20 @@ This activity involves developing optimized batch workflows for structure predic
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### Completed:
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- [x] Add support for re-using MSAs to Galaxy Australia AlphaFold2 service.
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[x] Add support for re-using MSAs to Galaxy Australia AlphaFold2 service.
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### In Progress:
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- [ ] Add local implementation of batch colabfoldsearch to the nfcore [proteinfold](https://nf-co.re/proteinfold/1.1.1) pipeline.
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- [ ] Add mmseqs-GPU support to the nfcore [proteinfold](https://nf-co.re/proteinfold/1.1.1) pipeline.
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- [ ] Add boltz interaction screening workflow to screen multiple potential partners against a protein (re-using MSA for anchor protein).
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- [ ] Add option for extreme replicate sampling for AlphaFold2.
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[ ] Add local implementation of batch colabfoldsearch to the nfcore [proteinfold](https://nf-co.re/proteinfold/1.1.1) pipeline.
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[ ] Add mmseqs-GPU support to the nfcore [proteinfold](https://nf-co.re/proteinfold/1.1.1) pipeline.
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[ ] Add boltz interaction screening workflow to screen multiple potential partners against a protein (re-using MSA for anchor protein).
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[ ] Add option for extreme replicate sampling for AlphaFold2.
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### Future:
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- [ ] Develop Galaxy workflow to take advantage of re-using MSAs.
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- [ ] Add stoichiometry screening workflow to the nfcore [proteinfold](https://nf-co.re/proteinfold/1.1.1) pipeline.
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[ ] Develop Galaxy workflow to take advantage of re-using MSAs.
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[ ] Add stoichiometry screening workflow to the nfcore [proteinfold](https://nf-co.re/proteinfold/1.1.1) pipeline.

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