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Merge pull request #48 from Australian-Structural-Biology-Computing/update-event
Update protein design seminar event
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‎_data/events.yml‎

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startDate: 2025-07-15
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endDate: 2025-07-15
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description: "**Topic:** Using AI protein design to design binding proteins to challenging bacterial transporters."
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url: https://www.eventbrite.com.au/e/webinar-leveraging-deep-learning-to-design-custom-protein-binding-proteins-tickets-1414347163439?aff=oddtdtcreator
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url: https://www.youtube.com/watch?v=3Ad2gUjeSL8
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location: Online
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- name: Protein design seminar series
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startDate: 2025-08-12
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endDate: 2025-11-11
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description: "**Topic:** TBD"
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url: https://www.eventbrite.com.au/e/webinar-leveraging-deep-learning-to-design-custom-protein-binding-proteins-tickets-1414347163439?aff=oddtdtcreator
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location: Online
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- name: Protein design seminar series
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startDate: 2025-12-03
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endDate: 2025-12-03
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description: "**Topic:** Baby steps in the AI-guided design of proteins to module gene transcription"
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url: https://www.eventbrite.com.au/e/webinar-leveraging-deep-learning-to-design-custom-protein-binding-proteins-tickets-1414347163439?aff=oddtdtcreator
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location: Online

‎_includes/tiles-simple.html‎

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border-radius: 12px;
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padding: 25px;
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transition: all 0.3s ease;
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background: #1c4587ff;
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background: #012152;;
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width: 100%;
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display: flex;
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flex-direction: column;

‎_includes/video-list-columns.html‎

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<div style="display: flex; gap: 20px; align-items: center;">
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<div style="flex: 1;">
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<iframe style="width: 100%; aspect-ratio: 560 / 315;" src="https://www.youtube.com/embed/{{ include.video_id }}"
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frameborder="0" allowfullscreen></iframe>
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</div>
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<div style="flex: 1;">
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<ul>
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{% assign items = include.list | split: "|" %}
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{% for item in items %}
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<li>{{ item }}</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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‎index.md‎

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{% include tiles-simple.html target = "tiles" col = "2" %}
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## Protein design seminar series
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{% include video-list-columns.html
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video_id="3Ad2gUjeSL8?si=T2Md7RwXn7YWl1S7"
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list="The protein design seminar series includes <b>6 presentations</b> from Australian structural biologists utilizing the latest developments in <i>de novo</i> protein design to develop protein binders to various therapeutic targets.|Watch <b>Dr Rhys Grinter</b> share a recent project involving the development of protein binders to a protein target involved in heme piracy.|The full series schedule, seminar registration link and recordings of completed seminars are available <b><a href=\"/protein_design_seminars\">here</a></b>.|The next event in the series will be on <b>August 12th</b> and will describe AI-Designed Anti-CRISPRs as Programmable CRISPR Inhibitors." %}
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## Upcoming Events
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‎pages/activities/protein_design_seminars.md‎

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contributors: [Rhys Grinter, Gavin Knott, Cyntia Taveneau, Josh Hardy, Kate Michie, Johan Gustafsson, Melissa Burke]
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toc: false
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---
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<!-- TODO: Add Richard Birkinshaw -->
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<!-- TODO: Add Richard Birkinshaw and Joel Mackay-->
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## Details
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Registration is **[available here](https://www.eventbrite.com.au/e/webinar-leveraging-deep-learning-to-design-custom-protein-binding-proteins-tickets-1414347163439?aff=oddtdtcreator)**.
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| Date | Time | Speaker(s) | Topic |
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|---------------|------------|--------------------|-------|
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| 15 July | 12pm AEST | Rhys Grinter | Using AI protein design to design binding proteins to challenging bacterial transporters |
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| 12 August | 12pm AEST | Cyntia Taveneau | Icrs: AI-Designed Anti-CRISPRs as Programmable CRISPR Inhibitors |
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| 16 September | 12pm AEST | Richard Birkinshaw | Using in silico design methods to create de novo proteins that selectively modulate apoptosis |
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| 7 October | 12pm AEST* | Josh Hardy | Introducing ProteinDJ: A modular and open-source framework for protein design workflows |
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| 11 November | 12pm AEST* | TBC | TBC |
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| Date | Time | Speaker(s) | Topic | Recording | Presentation |
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|---------------|------------|--------------------|-------|-----------|----------|
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| 15 July | 12pm AEST | Rhys Grinter | Using AI protein design to design binding proteins to challenging bacterial transporters | [YouTube](https://youtu.be/3Ad2gUjeSL8) | [Zenodo](https://doi.org/10.5281/zenodo.16511653)|
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| 12 August | 12pm AEST | Cyntia Taveneau | Icrs: AI-Designed Anti-CRISPRs as Programmable CRISPR Inhibitors | | |
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| 16 September | 12pm AEST | Richard Birkinshaw | Using in silico design methods to create de novo proteins that selectively modulate apoptosis | | |
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| 7 October | 12pm AEDT* | Josh Hardy | Introducing ProteinDJ: A modular and open-source framework for protein design workflows | | |
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| 11 November | 12pm AEDT* | TBC | TBC | | |
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| 3 December | 1pm AEDT* | Joel Mackay | Baby steps in the AI-guided design of proteins to module gene transcription | | |
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| *Affected by daylight savings |

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