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Merge pull request #63 from tlitfin/oct-update
October update
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_data/events.yml

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- name: Protein design seminar series
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startDate: 2025-11-11
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endDate: 2025-11-11
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description: "**Topic:** TBD"
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description: "**Topic:** Baby steps in the AI-guided design of proteins to module gene transcription"
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url: https://www.eventbrite.com.au/e/webinar-leveraging-deep-learning-to-design-custom-protein-binding-proteins-tickets-1414347163439?aff=oddtdtcreator
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location: Online
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- name: Australian Structural Biology Computing community meeting
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startDate: 2025-11-12
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endDate: 2025-11-12
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description: "Click to visit the rolling agenda and see details on how to join the next meeting."
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url: https://docs.google.com/document/d/1miRyOOOW7HeDsCvzJwVEOhaAzPBve8od9WUvsAsFfcw/edit#heading=h.owmugrvs22hi
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location: Online
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- name: Protein design seminar series
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startDate: 2025-12-03
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endDate: 2025-12-03
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description: "**Topic:** Baby steps in the AI-guided design of proteins to module gene transcription"
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url: https://www.eventbrite.com.au/e/webinar-leveraging-deep-learning-to-design-custom-protein-binding-proteins-tickets-1414347163439?aff=oddtdtcreator
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location: Online

index.md

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## Protein design seminar series
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{% include video-list-columns.html
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video_id="9-3sHy1ybpE"
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list="The protein design seminar series includes <b>6 presentations</b> from Australian structural biologists utilising the latest developments in <i>de novo</i> protein design to develop protein binders to various therapeutic targets.|Watch <b>Dr Richard Birkinshaw</b> share a recent project using <i>in silico</i> design methods to create <i>de novo</i> proteins that selectively modulate apoptosis.|The full series schedule, seminar registration link and recordings of completed seminars are available <b><a href=\"/protein_design_seminars\">here</a></b>.|The next event in the series will be on <b>October 7th</b> and will describe ProteinDJ: A modular and open-source framework for protein design workflows" %}
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video_id="xwvF62HxaF0"
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list="The protein design seminar series includes <b>5 presentations</b> from Australian structural biologists utilising the latest developments in <i>de novo</i> protein design to develop protein binders to various therapeutic targets.|Watch <b>Dr Josh Hardy</b> share a recent project describing the development of ProteinDJ: A modular and open-source framework for protein design workflows.|The full series schedule, seminar registration link and recordings of completed seminars are available <b><a href=\"/protein_design_seminars\">here</a></b>.|The final event in the series will be on <b>November 11th</b> and will describe baby steps in the AI-guided design of proteins to modulate gene transcription." %}
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## Upcoming Events
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pages/activities/protein_design_seminars.md

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| 15 July | 12pm AEST | Rhys Grinter | Using AI protein design to design binding proteins to challenging bacterial transporters | [YouTube](https://youtu.be/3Ad2gUjeSL8) | [Zenodo](https://doi.org/10.5281/zenodo.16511653) |
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| 12 August | 12pm AEST | Cyntia Taveneau | AIcrs: AI-Designed Anti-CRISPRs as Programmable CRISPR Inhibitors | [YouTube](https://www.youtube.com/watch?v=GSoOfyJUYSA) | [Zenodo](https://doi.org/10.5281/zenodo.17033916) |
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| 16 September | 12pm AEST | Richard Birkinshaw | Using in silico design methods to create de novo proteins that selectively modulate apoptosis | [YouTube](https://youtu.be/9-3sHy1ybpE) | [Zenodo](https://doi.org/10.5281/zenodo.17148914) |
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| 7 October | 12pm AEDT* | Josh Hardy | Introducing ProteinDJ: A modular and open-source framework for protein design workflows | | |
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| 11 November | 12pm AEDT* | TBC | TBC | | |
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| 3 December | 1pm AEDT* | Joel Mackay | Baby steps in the AI-guided design of proteins to module gene transcription | | |
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| 7 October | 12pm AEDT* | Josh Hardy | Introducing ProteinDJ: A modular and open-source framework for protein design workflows | [YouTube](https://www.youtube.com/watch?v=xwvF62HxaF0) | [Zenodo](https://zenodo.org/records/17337232) |
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| 11 November | 12pm AEDT* | Joel Mackay | Baby steps in the AI-guided design of proteins to module gene transcription | | |
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| *Affected by daylight savings |

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