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2 changes: 1 addition & 1 deletion index.md
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Expand Up @@ -4,7 +4,7 @@ toc: false
# Special sidebar rules for news on the index page are included in layouts/default.html, as in https://github.com/workflowhub-eu/about/blob/596b18d7ab1055ee1e53bc98a3bd120a06518e06/_layouts/default.html
#hide_sidebar: true
#sidebar: true

redirect_from: /website/
tiles:
- title: "Join the conversation"
url: /join_conversation
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1 change: 1 addition & 0 deletions pages/activities.md
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Expand Up @@ -3,6 +3,7 @@ title: Community activities
page_id: activities
#type: resources
toc: false
redirect_from: /website/activities/
---

<div class="legend-item legend-item-1">
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1 change: 1 addition & 0 deletions pages/activities/batch_structure_prediction.md
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Expand Up @@ -6,6 +6,7 @@ roadmap: A shared platform, or platforms (Roadmap D3A)
roadmap_category: D3
contributors: [Ziad Al-Bkhetan, Mitchell O'Brien, Joshua Storm Caley, Keiran Rowell, Cameron Hyde, Thomas Litfin]
toc: false
redirect_from: /website/batch_structure_prediction
---

## Details
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1 change: 1 addition & 0 deletions pages/activities/bindcraft_access.md
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Expand Up @@ -6,6 +6,7 @@ roadmap: A shared platform, or platforms (Roadmap D3Ac)
roadmap_category: D3
contributors: [Ziad Al-Bkhetan, Thomas Litfin]
toc: false
redirect_from: /website/bindcraft_access
---


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1 change: 1 addition & 0 deletions pages/activities/infrastructure_roadmap.md
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Expand Up @@ -6,6 +6,7 @@ contributors: [Kate Michie, Thomas Litfin, Sarah Beecroft, Brett Collins, Matthe
roadmap: Community co-authored document
roadmap_category: none
toc: false
redirect_from: /website/infrastructure_roadmap
---

## Citation
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1 change: 1 addition & 0 deletions pages/activities/nci_data_collections.md
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Expand Up @@ -6,6 +6,7 @@ roadmap: A shared platform, or platforms (Roadmap D3F)
roadmap_category: D3
contributors: [Matthew Downton, Kisaru Liyanage, Wenjing Xue, Joshua Storm Caley, Thomas Litfin]
toc: false
redirect_from: /website/nci_data_collections
---

## Details
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1 change: 1 addition & 0 deletions pages/activities/nci_ood_proteinfold.md
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Expand Up @@ -6,6 +6,7 @@ roadmap: A shared platform, or platforms (Roadmap D3Ac)
roadmap_category: D3
contributors: [Matthew Downton, Kisaru Liyanage, Wenjing Xue, Joshua Storm Caley, Keiran Rowell, Thomas Litfin]
toc: false
redirect_from: /website/nci_ood_proteinfold
---

## Details
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1 change: 1 addition & 0 deletions pages/activities/nfcore_proteinfold.md
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Expand Up @@ -6,6 +6,7 @@ roadmap: A shared platform, or platforms (Roadmap D3A)
roadmap_category: D3
contributors: [Ziad Al-Bkhetan, Mitchell O'Brien, Joshua Storm Caley, Keiran Rowell, Thomas Litfin]
toc: false
redirect_from: /website/nfcore_proteinfold
---

## Details
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1 change: 1 addition & 0 deletions pages/activities/nfcore_proteinfold_pawsey.md
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Expand Up @@ -6,6 +6,7 @@ roadmap: A shared platform, or platforms (Roadmap D3Ab)
roadmap_category: D3
contributors: [Sarah Beecroft, Joshua Storm Caley]
toc: false
redirect_from: /website/nfcore_proteinfold_pawsey
---

## Details
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3 changes: 2 additions & 1 deletion pages/activities/protein_design_seminars.md
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Expand Up @@ -4,8 +4,9 @@ description: Community members will host a monthly seminar series to share knowl
type: activity_in_progress
roadmap: A computational structural biology training program (Roadmap D2)
roadmap_category: D2
contributors: [Rhys Grinter, Gavin Knott, Cyntia Taveneau, Josh Hardy, Kate Michie, Johan Gustafsson, Melissa Burke]
contributors: [Rhys Grinter, Gavin Knott, Cyntia Taveneau, Josh Hardy, Joel Mackay, Kate Michie, Johan Gustafsson, Melissa Burke]
toc: false
redirect_from: /website/proteinfold_design_desminars
---
<!-- TODO: Add Richard Birkinshaw and Joel Mackay-->

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1 change: 1 addition & 0 deletions pages/contributing/contributing.md
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toc: false
#type: resources
toc: false
redirect_from: /website/contributing
---

{% include callout.html type="important" content="Contributing guidelines will be available soon." %}
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1 change: 1 addition & 0 deletions pages/contributing/guide_template.md
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Expand Up @@ -3,6 +3,7 @@ title: [How-to-Guide template]
contributors: [Johan Gustafsson]
description: Add a plain text description here.
affiliations: [Australian BioCommons]
redirect_from: /website/guide_template
---


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1 change: 1 addition & 0 deletions pages/contributing/provide_documentation.md
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Expand Up @@ -3,6 +3,7 @@ title: [Provide us your document]
contributors: [Keiran Rowell]
description: Advice on how we can convert your document to a guide on the website
affiliations: [Australian BioCommons, Structural Biology Facility UNSW]
redirect_from: /website/provide_documentation
---

## Bring your own
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1 change: 1 addition & 0 deletions pages/contributors.md
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toc: false
#type: resources
toc: false
redirect_from: /website/contributors/
---

The projects included here represent a joint effort by the following people at multiple Australian institutions:
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1 change: 1 addition & 0 deletions pages/events.md
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Expand Up @@ -3,6 +3,7 @@ title: Events
description: Announcements for relevant courses, meetings, and information about structural biology.
page_id: events
toc: false
redirect_from: /website/events
---


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1 change: 1 addition & 0 deletions pages/external_resources.md
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#datatable: true
#type: resources
toc: false
redirect_from: /website/external_resources
---

<!-- {% include resource-table-all.html %} -->
1 change: 1 addition & 0 deletions pages/guides.md
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#type: resources
datatable: true
toc: false
redirect_from: /website/guides
---

{% include section-navigation-tiles.html type="guide"%}
1 change: 1 addition & 0 deletions pages/guides/cli_instruct/basics.md
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Expand Up @@ -4,6 +4,7 @@ type: cli-guide
contributors: [Keiran Rowell, James Lingford]
description: An example command line guide
affiliations: [Structural Biology Facility UNSW, Monash University]
redirect_from: /website/basics
---

Learning the command line is useful if you want to do things at scale or use anything outside of pre-built tools
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Expand Up @@ -6,6 +6,7 @@ description: Practical guide for working with real AlphaFold data
affiliations: [University of Queensland]
sidebar: false
toc: true
redirect_from: /website/AlphaFold2_how_to_guide
---


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Expand Up @@ -6,6 +6,7 @@ contributors: [James Lingford]
affiliations: [Monash University]
toc: true
sidebar: false
redirect_from: /website/best-practices-alphafold
---

AlphaFold structural models are appearing in papers more frequently. As such, it’s important that the scientific community agree on:
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Expand Up @@ -4,6 +4,7 @@ type: prot-guide
contributors: [Keiran Rowell]
description: How-to Guide for picking the appropriate protein structure prediction program
affiliations: [Structural Biology Facility UNSW, Galaxy Australia, Australian BioCommons]
redirect_from: /website/protein_struct_inference
---

## Australian AlphaFold2 service
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1 change: 1 addition & 0 deletions pages/guides/visualisation/pymol.md
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contributors: [Keiran Rowell]
description: A blank pymol guide
affiliations: [Structural Biology Facility UNSW]
redirect_from: /website/pymol
---

A tutorial on Pymol
1 change: 1 addition & 0 deletions pages/join_conversation.md
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Expand Up @@ -3,6 +3,7 @@ title: Join the conversation
description:
page_id: join
toc: false
redirect_from: /website/join_conversation

tiles:
- title: "Quarterly community meetings"
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1 change: 1 addition & 0 deletions pages/news.md
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title: News
page_id: news
toc: false
redirect_from: /website/news
---

{% include news.html truncate=true %}
1 change: 1 addition & 0 deletions pages/resources/external_communities.md
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Expand Up @@ -3,6 +3,7 @@ title: External Communities
page_id: external_resources_communities
datatable: true
toc: false
redirect_from: /website/external_communities
#type: resources
---

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1 change: 1 addition & 0 deletions pages/resources/external_databases.md
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Expand Up @@ -3,6 +3,7 @@ title: External Databases
page_id: external_resources_dbs
datatable: true
toc: false
redirect_from: /website/external_databases
#type: resources
---

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1 change: 1 addition & 0 deletions pages/resources/external_guides.md
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Expand Up @@ -3,6 +3,7 @@ title: External Guides
page_id: external_resources_guides
datatable: true
toc: false
redirect_from: /website/external_guides
#type: resources
---

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1 change: 1 addition & 0 deletions pages/resources/external_servers.md
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Expand Up @@ -3,6 +3,7 @@ title: External Resources & Servers
page_id: external_resources_servers
datatable: true
toc: false
redirect_from: /website/external_servers
#type: resources
---

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1 change: 1 addition & 0 deletions pages/resources/external_videos.md
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Expand Up @@ -3,6 +3,7 @@ title: External Videos
page_id: external_resources_videos
datatable: true
toc: false
redirect_from: /website/external_videos
#type: resources
---

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1 change: 1 addition & 0 deletions pages/resources/external_viz.md
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Expand Up @@ -3,6 +3,7 @@ title: External Visualization
page_id: external_resources_viz
datatable: true
toc: false
redirect_from: /website/external_viz
#type: resources
---

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1 change: 1 addition & 0 deletions pages/workgroup_template_directory/workgroup_index.md
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@@ -1,6 +1,7 @@
---
title: Title
toc: false
redirect_from: /website/workgroup_index
---


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