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1010params {
1111
12+ // Dated prefixes, can be modified for alternate versions
13+ alphafold2_params_prefix = "alphafold_params_2022-12-06"
14+ uniref30_prefix = "UniRef30_2023_02"
15+
1216 // AlphaFold2 links
1317 bfd_link = 'https://storage.googleapis.com/alphafold-databases/casp14_versions/bfd_metaclust_clu_complete_id30_c90_final_seq.sorted_opt.tar.gz'
1418 alphafold2_small_bfd_link = 'https://storage.googleapis.com/alphafold-databases/reduced_dbs/bfd-first_non_consensus_sequences.fasta.gz'
@@ -26,7 +30,7 @@ params {
2630 // Alphafold2 paths
2731 bfd_path = "${params.alphafold2_db}/bfd/*"
2832 alphafold2_small_bfd_path = "${params.alphafold2_db}/small_bfd/*"
29- alphafold2_params_path = "${params.alphafold2_db}/params/alphafold_params_* /*"
33+ alphafold2_params_path = "${params.alphafold2_db}/params/${params.alphafold2_params_prefix} /*"
3034 alphafold2_mgnify_path = "${params.alphafold2_db}/mgnify/*"
3135 pdb70_path = "${params.alphafold2_db}/pdb70/*"
3236 alphafold2_pdb_mmcif_path = "${params.alphafold2_db}/pdb_mmcif/mmcif_files"
@@ -53,9 +57,6 @@ params {
5357 alphafold3_pdb_seqres_path = "${params.alphafold3_db}/pdb_seqres/*"
5458 alphafold3_uniprot_path = "${params.alphafold3_db}/uniprot/*"
5559
56- // Dated prefix for UniRef30 (e.g. UniRef30_2023_02)
57- uniref30_prefix = "UniRef30_2023_02"
58-
5960 // Boltz links
6061 boltz_ccd_link = 'https://huggingface.co/boltz-community/boltz-1/resolve/main/ccd.pkl'
6162 boltz_model_link = 'https://huggingface.co/boltz-community/boltz-1/resolve/main/boltz1_conf.ckpt'
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