Name clash

[gavryushkina]

In the main beast2 package there is also test.beast.evolution.likelihood.TreeLikelihoodTest class.

[tgvaughan]

Yikes, 4 years later and this is still an issue. It doesn't cause huge problems in practice because the package JARs that are distributed don't usually include the test classes, but it could cause headaches in other cases.

Would it be possible to rename the BEASTLabs class likelihood test class?

[kche309]

I've also had this issue come up when building beast2/BEASTLabs.
Perhaps we can rename the BEASTLabs class to TreeLikelihoodBeastLabsTest?

[walterxie]

you should use your own namespace for developing your models, for example, do not use beast.evolution.errormodel, instead you could use phylonco.evolution.errormodel. Then you do not have to worry your classes names will be conflict with other packages.

[kche309]

Thanks Walter. This is a BEASTLabs name clash with beast2, so we would have to either use a different namespace test.beastlabs.evolution.likelihood or rename the BEASTLabs TreeLikelihoodTest class.