lint

Author: joshua-benchling

src/allotropy/allotrope/schema_mappers/adm/plate_reader/rec/_2025/_03/plate_reader.py

@@ -17,14 +17,14 @@
     MeasurementAggregateDocument,
     MeasurementDocument,
     Model,
+    PeakItem,
+    PeakList,
     PlateReaderAggregateDocument,
     PlateReaderDocumentItem,
     ProcessedDataAggregateDocument,
     ProcessedDataDocumentItem,
     SampleDocument,
     TQuantityValueModel,
-    PeakItem,
-    PeakList,
 )
 from allotropy.allotrope.models.shared.components.plate_reader import SampleRoleType
 from allotropy.allotrope.models.shared.definitions.custom import (
@@ -196,6 +196,7 @@ class Measurement:
 
     calc_docs_custom_info: dict[str, Any] | None = None
 
+
 @dataclass(frozen=True)
 class MeasurementGroup:
     measurements: list[Measurement]
@@ -393,18 +394,22 @@ def _get_ultraviolet_absorbance_measurement_document(
                 processed_data_document=[
                     ProcessedDataDocumentItem(
                         processed_data_identifier=measurement.processed_data_document.identifier,
-                        **({
-                            "data_processing_document": {
+                        data_processing_document=(
+                            {
                                 "concentration factor": quantity_or_none(
                                     TQuantityValueNanogramPerMicroliter,
                                     measurement.processed_data_document.concentration_factor,
                                 )
                             }
-                        } if measurement.processed_data_document.concentration_factor is not None else {}),
+                            if measurement.processed_data_document.concentration_factor
+                            is not None
+                            else None
+                        ),
                         peak_list=PeakList(
                             peak=[
                                 add_custom_information_document(
-                                    PeakItem(), self._process_peak_custom_info(peak_custom_info)
+                                    PeakItem(),
+                                    self._process_peak_custom_info(peak_custom_info),
                                 )
                                 for peak_custom_info in (
                                     measurement.processed_data_document.peak_list_custom_info
@@ -856,9 +861,11 @@ def _get_error_aggregate_document(
             else None
         )
 
-    def _process_peak_custom_info(self, peak_custom_info: dict[str, Any]) -> dict[str, Any]:
+    def _process_peak_custom_info(
+        self, peak_custom_info: dict[str, Any]
+    ) -> dict[str, Any]:
         """Process peak custom info by applying proper units to measured values."""
-        processed_info = {}
+        processed_info: dict[str, Any] = {}
 
         for key, value in peak_custom_info.items():
             if key == "peak mean diameter":

src/allotropy/parsers/unchained_labs_lunatic/unchained_labs_lunatic_calcdocs.py

@@ -1,5 +1,5 @@
 from allotropy.allotrope.models.shared.definitions.units import UNITLESS
-from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2024._06.plate_reader import (
+from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2025._03.plate_reader import (
     MeasurementGroup,
 )
 from allotropy.calcdocs.config import (

src/allotropy/parsers/unchained_labs_lunatic/unchained_labs_lunatic_structure.py

@@ -60,7 +60,7 @@ def _extract_peak_data(well_plate_data: SeriesData) -> list[dict[str, Any]]:
             peak_numbers.add(int(match.group(1)))
 
     for peak_num in sorted(peak_numbers):
-        peak_info = {}
+        peak_info: dict[str, Any] = {}
 
         mean_dia = well_plate_data.get(float, f"peak {peak_num} mean dia (nm)")
         if mean_dia is not None:

tests/parsers/unchained_labs_lunatic/unchained_labs_lunatic_structure_test.py

@@ -4,7 +4,7 @@
 import pandas as pd
 import pytest
 
-from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2024._06.plate_reader import (
+from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2025._03.plate_reader import (
     MeasurementGroup,
 )
 from allotropy.exceptions import AllotropeConversionError