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feat: Beckman Vi-Cell Blu - add get_unread data to parser#1023

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nathan-stender merged 6 commits into
Benchling-Open-Source:mainfrom
felipenarv:felipenarv/add_get_unread_to_beckman_vi_cell_blu
Jul 7, 2025
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feat: Beckman Vi-Cell Blu - add get_unread data to parser#1023
nathan-stender merged 6 commits into
Benchling-Open-Source:mainfrom
felipenarv:felipenarv/add_get_unread_to_beckman_vi_cell_blu

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@felipenarv
felipenarv requested review from a team and slopez-b as code owners June 24, 2025 21:51
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felipenarv force-pushed the felipenarv/add_get_unread_to_beckman_vi_cell_blu branch from 9eebab1 to c8ac328 Compare June 24, 2025 22:25
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@james-leinas to review unread data for ASM placement

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@felipenarv

Beckman Vi-Cell Blu Unread Data

Add Custom Information Document fields to:

Device Control Document

  • Wash
  • Mixing cycles
  • Aspiration cycles

Data Processing Document

  • Decluster degree
  • Minimum circularity
  • Viable spot area
  • Viable spot brightness (%)
  • Cell sharpness
  • Average background intensity
  • Bubble count
  • Cluster count

Image Document -- Note that this will need to be added to the adapter (available in the schema/schema mapper)

  • Images for analysis
  • Images

Processed Data Document

  • Average cells per image

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felipenarv requested a review from james-leinas June 27, 2025 15:02
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felipenarv requested a review from james-leinas July 1, 2025 14:48

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@felipenarv great work! ASM LGTM! 🎉

@nathan-stender
nathan-stender merged commit 1b64a09 into Benchling-Open-Source:main Jul 7, 2025
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@nathan-stender nathan-stender changed the title feat: Beckman Vi-Cell Blu - Added get_unread data to parser feat: Beckman Vi-Cell Blu - add get_unread data to parser Jul 7, 2025
nathan-stender added a commit that referenced this pull request Jul 9, 2025
### Added

- Bio-Rad Bio-Plex Manager - Add support for statistics dimensions
(#1029)
- Agilent Gen5 - Add Conc/Dil to Sample document custom fields (#1030)
- Roche Cedex BioHT - Added support for mg/L (#1028)
- Thermo Fisher Scientific SkanIt - Support multiplates (#1025)
- Beckman Vi-Cell Blu - Added get_unread data to parser (#1023)
- Molecular Devices SoftMax Pro - Enable Reduced-only file parsing
(#1016)
joshua-benchling pushed a commit that referenced this pull request Sep 15, 2025
Co-authored-by: Nathan Stender <nathan.stender@benchling.com>
joshua-benchling pushed a commit that referenced this pull request Sep 15, 2025
### Added

- Bio-Rad Bio-Plex Manager - Add support for statistics dimensions
(#1029)
- Agilent Gen5 - Add Conc/Dil to Sample document custom fields (#1030)
- Roche Cedex BioHT - Added support for mg/L (#1028)
- Thermo Fisher Scientific SkanIt - Support multiplates (#1025)
- Beckman Vi-Cell Blu - Added get_unread data to parser (#1023)
- Molecular Devices SoftMax Pro - Enable Reduced-only file parsing
(#1016)
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3 participants