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feat: Migrate beckman_pharmspec to use SeriesData.get_unread - #1081

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oscar-castro-bl merged 4 commits into
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beckman_pharmaspec_get_unread
Sep 25, 2025
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feat: Migrate beckman_pharmspec to use SeriesData.get_unread#1081
oscar-castro-bl merged 4 commits into
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beckman_pharmaspec_get_unread

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@oscar-castro-bl
oscar-castro-bl requested review from a team and slopez-b as code owners September 19, 2025 21:17
@oscar-castro-bl oscar-castro-bl changed the title Migrate beckman_pharmspec to use SeriesData.get_unread feat: Migrate beckman_pharmspec to use SeriesData.get_unread Sep 22, 2025

@james-leinas james-leinas left a comment

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Beckman PharmSpec UnRead Data

Skip

  • "Nan"
  • Run No. -- already mapped to measurement identifier

Device Control Document

  • Sensor Model -- rename as model number in custom information

Sample Document

  • Batch-Nr -- rename as batch identifier in custom information, if value is "-" we should ignore from adding to ASM, None value

Measurement Document

  • Ro-Nr -- if value is "-" we should ignore from adding to ASM, None value
  • Bemerkungen 1 -- rename to observation 1, if value is "-" we should ignore from adding to ASM, None value
  • Bemerkungen 2 -- rename to observation 2, if value is "-" we should ignore from adding to ASM, None value

ajcariaga16
ajcariaga16 previously approved these changes Sep 24, 2025
james-leinas
james-leinas previously approved these changes Sep 24, 2025

@nathan-stender nathan-stender left a comment

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Mostly LGTM - one change

Comment thread src/allotropy/parsers/utils/pandas.py Outdated
@oscar-castro-bl
oscar-castro-bl merged commit ddbfa62 into main Sep 25, 2025
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@oscar-castro-bl
oscar-castro-bl deleted the beckman_pharmaspec_get_unread branch September 25, 2025 16:20
nathan-stender added a commit that referenced this pull request Sep 30, 2025
### Added

- AppBio QuantStudio Design & Analysis - remove duplicates and hardcoded
values from measurement custom info doc (#1088)
- Tecan Magellan - remove unread keys warning (#1086)
- Beckman Coulter Biomek - Add handle for unified transfer and pipetting
samples (#1085)
- Agilent OpenLab CDS - add peak area percentage and peak height (#1083)
- Roche Cedex Bioht - use get_unread (#1084)
- Chemometec NC View - Migrated to use get unread (#1082)
- Migrate beckman_pharmspec to use SeriesData.get_unread (#1081)
- Beckman Coulter Biomek Liquid Handler - add support for log headerless
files (#1078)
- Migrate ctl_immunospot to use SeriesData.get_unread (#1076)
- Cytiva Biacore Insight/Cytiva Biacore T200 Control - Update Slope
calculated data's reported units to RU/s (#1077)
- Molecular Devices SoftMax Pro - Add unread data (#1071)
- Perkin elmer envision get unread (#1073)
- BMG mars - Migrate to use get_unread info (#1074)
- Unchained Labs Lunnatic & Stunner - refactor measurements to use data
cubes for wavelength spectrums (#1062)
- Cytiva Biacore Insight - initial implementation (#1066)
- NovaBio Flex2 - use SeriesData.get_unread (#1070)
- Migrate revvity_kaleido to use SeriesData.get_unread (#1060)

### Fixed

- Binding Affinity Analyzer - add support for special keys in processed
data document (#1087)
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4 participants