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feat: Qiacuity dPCR - Added unread data - #1103

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nathan-stender merged 5 commits into
Benchling-Open-Source:mainfrom
felipenarv:felipenarv/qiacuity_dpcr_get_unread
Nov 13, 2025
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feat: Qiacuity dPCR - Added unread data#1103
nathan-stender merged 5 commits into
Benchling-Open-Source:mainfrom
felipenarv:felipenarv/qiacuity_dpcr_get_unread

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@felipenarv
felipenarv requested review from a team and slopez-b as code owners October 10, 2025 16:44
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@james-leinas Is that new custom data in the correct place? That's the only unread data I saw

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Code LGTM - pending @james-leinas's approval for location

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Qiacuity Unread Data

Measurement Document

  • Reaction Mix

Sample Document

  • IC -- if value is "-" or blank we should not include in ASM JSON
  • Control Type -- if value is "-" or blank we should not include in ASM JSON

Also looks like we have some calculated data that we should be capturing into the ASM

Calculated Data Document

  • Calculated Data Name: CI (95%), Data Source Identifier/Aggregating Property: Measurement Identifier, Units: #/μL
  • Calculated Data Name: SD, Data Source Identifier/Aggregating Property: Measurement Identifier, Units: (unitless)
  • Calculated Data Name: CV%, Data Source Identifier/Aggregating Property: Measurement Identifier, Units: %
  • Calculated Data Name: Mean Concentration, Data Source Identifier: Measurement Identifier, Aggregating Property: Sample Identifier, Units: #/μL

@felipenarv
felipenarv force-pushed the felipenarv/qiacuity_dpcr_get_unread branch from 66c815a to 5437d3d Compare October 22, 2025 19:00
Comment thread src/allotropy/parsers/qiacuity_dpcr/constants.py Outdated
james-leinas
james-leinas previously approved these changes Oct 23, 2025
Comment thread src/allotropy/allotrope/schema_mappers/adm/pcr/BENCHLING/_2023/_09/dpcr.py Outdated
@joshua-benchling
joshua-benchling self-requested a review November 11, 2025 18:10
@nathan-stender
nathan-stender merged commit da785a7 into Benchling-Open-Source:main Nov 13, 2025
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nathan-stender added a commit that referenced this pull request Nov 19, 2025
### Added

- JSON-to-CSV - improve list parsing to better support datacubes (#1124)
- Cytiva Biacore T200 control - add unread data (#1120)
- Qiacuity dPCR - Added unread data (#1103)
- Migrate biorad_bioplex_manager to use SeriesData.get_unread (#1100)
- Mass spectrometer ASM schema (#1121)
- Roche Cedex BioHT - Add support for mM unit (mmol/L) (#1119)
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3 participants