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chore: Cytiva Biacore T200 Control - remove debug files #1127

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Merged
joshua-benchling merged 1 commit into from
Dec 3, 2025
Merged

chore: Cytiva Biacore T200 Control - remove debug files #1127

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22 changes: 1 addition & 21 deletions src/allotropy/parsers/cytiva_biacore_t200_control/cytiva_biacore_t200_control_parser.py
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Original file line number Diff line number Diff line change
@@ -1,7 +1,3 @@
import json
from pathlib import Path, PureWindowsPath
import warnings

from allotropy.allotrope.models.adm.binding_affinity_analyzer.wd._2024._12.binding_affinity_analyzer import (
Model,
)
Expand Down Expand Up @@ -36,24 +32,8 @@ class CytivaBiacoreT200ControlParser(VendorParser[MapperData, Model]):
def create_data(self, named_file_contents: NamedFileContents) -> MapperData:
base_data = DictData(decode_data(named_file_contents))
data = Data.create(base_data)
mapper_data = MapperData(
return MapperData(
metadata=create_metadata(data, named_file_contents),
measurement_groups=create_measurement_groups(data),
calculated_data=create_calculated_data(data),
)
try:
unread = base_data.get_unread_deep()
original_path = named_file_contents.original_file_path
# Derive file stem robustly for both POSIX and Windows-style paths
stem = (
PureWindowsPath(original_path).stem
if "\\" in original_path and "/" not in original_path
else Path(original_path).stem
)
out_name = f"{stem}data_unread_2.json"
with open(out_name, "w", encoding="utf-8") as f:
json.dump(unread, f, ensure_ascii=False, indent=2)
except Exception as e:
# Best-effort debug artifact; do not break parsing on failure
warnings.warn(f"Failed to write unread debug file: {e!s}", stacklevel=1)
return mapper_data
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