From 4f9b3cf1af4b2af8dd97f343fdf867f3d84c4578 Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Thu, 11 Dec 2025 11:46:27 -0500 Subject: [PATCH 1/7] New test case working --- .../agilent_gen5/agilent_gen5_parser.py | 85 +- .../agilent_gen5/agilent_gen5_reader.py | 155 +- .../agilent_gen5/agilent_gen5_structure.py | 87 +- ...file (Fibrillation data) - TXT format.json | 37162 ++++++++++++++++ ...afile (Fibrillation data) - TXT format.txt | 1993 + 5 files changed, 39424 insertions(+), 58 deletions(-) create mode 100644 tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json create mode 100644 tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.txt diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py index a35cf9192..42d13da80 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py @@ -1,9 +1,12 @@ +from collections import defaultdict + from allotropy.allotrope.models.adm.plate_reader.rec._2025._03.plate_reader import ( Model, ) from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2025._03.plate_reader import ( Data, Mapper, + MeasurementGroup, ) from allotropy.exceptions import AllotropeConversionError from allotropy.named_file_contents import NamedFileContents @@ -16,9 +19,51 @@ NO_MEASUREMENTS_ERROR, ) from allotropy.parsers.release_state import ReleaseState +from allotropy.parsers.utils.calculated_data_documents.definition import ( + CalculatedDocument, +) from allotropy.parsers.vendor_parser import VendorParser +def merge_measurement_groups( + all_groups: list[list[MeasurementGroup]], +) -> list[MeasurementGroup]: + """Merge multiple lists of measurement groups by well position. + + Each list of measurement groups represents results from a different read/filter set. + This function combines them so that each well has all its measurements in a single group. + """ + # Group by well position + groups_by_well: dict[str, list[MeasurementGroup]] = defaultdict(list) + for group_list in all_groups: + for group in group_list: + # Get the well position from the first measurement in the group + if group.measurements: + well_pos = group.measurements[0].location_identifier + groups_by_well[well_pos].append(group) + + # Merge measurements for each well in sorted order for consistency + merged_groups = [] + for well_pos in sorted(groups_by_well.keys()): + groups = groups_by_well[well_pos] + # Take metadata from the first group + base_group = groups[0] + # Collect all measurements from all groups for this well + all_measurements = [] + for group in groups: + all_measurements.extend(group.measurements) + + # Create merged group + merged_group = MeasurementGroup( + measurement_time=base_group.measurement_time, + plate_well_count=base_group.plate_well_count, + measurements=all_measurements, + ) + merged_groups.append(merged_group) + + return merged_groups + + class AgilentGen5Parser(VendorParser[Data, Model]): DISPLAY_NAME = "Agilent Gen5" RELEASE_STATE = ReleaseState.RECOMMENDED @@ -29,14 +74,44 @@ def create_data(self, named_file_contents: NamedFileContents) -> Data: reader = AgilentGen5Reader(named_file_contents) context = reader.extract_data_context(named_file_contents.original_file_path) - processor = get_processor(context) - measurement_groups, calculated_data = processor.process(context) + # Process each ReadData entry separately and collect results + all_measurement_groups: list[list[MeasurementGroup]] = [] + all_calculated_data: list[CalculatedDocument] = [] + + for read_index, read_data in enumerate(context.read_data, start=1): + # Create a test sub-context to check if this is kinetic + test_context = reader.create_read_context(context, read_data, read_index) + is_kinetic = test_context.has_kinetic_measurements + + if is_kinetic and len(read_data.measurement_labels) > 1: + # Split kinetic read into separate sub-reads per filter set + # Each label gets its own Time section processed separately + # Sort labels consistently to ensure stable output + sorted_labels = sorted(read_data.measurement_labels, key=lambda x: (len(x), x)) + for label in sorted_labels: + sub_context = reader.create_read_context( + context, read_data, read_index, specific_label=label + ) + processor = get_processor(sub_context) + measurement_groups, calculated_data = processor.process(sub_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) + else: + # Process the read as a whole (either endpoint, or kinetic with single label) + sub_context = test_context + processor = get_processor(sub_context) + measurement_groups, calculated_data = processor.process(sub_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) + + # Merge measurement groups by well position + merged_groups = merge_measurement_groups(all_measurement_groups) - if not measurement_groups: + if not merged_groups: raise AllotropeConversionError(NO_MEASUREMENTS_ERROR) return Data( metadata=create_metadata(context.header_data), - measurement_groups=measurement_groups, - calculated_data=calculated_data, + measurement_groups=merged_groups, + calculated_data=all_calculated_data, ) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py index 7d51a2f6d..30513a1c1 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py @@ -1,5 +1,8 @@ from io import StringIO +from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2025._03.plate_reader import ( + ErrorDocument, +) from allotropy.exceptions import AllotropeConversionError from allotropy.named_file_contents import NamedFileContents from allotropy.parsers.agilent_gen5.agilent_gen5_structure import ( @@ -14,7 +17,6 @@ ) from allotropy.parsers.agilent_gen5.constants import ( MULTIPLATE_FILE_ERROR, - NO_MEASUREMENTS_ERROR, NO_PLATE_DATA_ERROR, ) from allotropy.parsers.lines_reader import SectionLinesReader @@ -54,6 +56,7 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: self.header_data = df_to_series_data(df) self.sections = {} + self.time_sections: dict[str, list[str]] = {} # Special handling for the "Procedure Details" section, which has an empty line after the title. assert_not_none( @@ -66,9 +69,31 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: self.sections["Procedure Details"] = list(plate_reader.pop_until_empty()) plate_reader.drop_empty() + # Track the last read label for associating with Time sections + last_read_label: str | None = None + while plate_reader.current_line_exists(): lines = list(plate_reader.pop_until_empty()) - self.sections[lines[0].split("\t")[0].strip(":")] = lines + + # Skip empty sections + if not lines: + plate_reader.drop_empty() + continue + + section_name = lines[0].split("\t")[0].strip(":") + + # Check if this is a "Read X:label" section (single line, starts with "Read ") + if len(lines) == 1 and section_name.startswith("Read "): + last_read_label = section_name + continue + + # If this is a Time section and we have a read label, store it with the read label + if section_name == "Time" and last_read_label: + self.time_sections[last_read_label] = lines + last_read_label = None + else: + self.sections[section_name] = lines + plate_reader.drop_empty() def get_required_section(self, section_name: str) -> list[str]: @@ -149,28 +174,126 @@ def is_results(section: list[str]) -> bool: return None def extract_data_context(self, file_path: str) -> Gen5DataContext: - results_section = self.get_results_section() - if not results_section: - self.header_data.get_unread() - raise AllotropeConversionError(NO_MEASUREMENTS_ERROR) - - kinetic_result = get_kinetic_measurements(self.time_section) - kinetic_measurements, kinetic_elapsed_time, kinetic_errors = kinetic_result or ( - {}, - [], - {}, - ) - + """Extract the main context with all ReadData entries.""" + # For the main context, we don't populate kinetic_measurements or results_section + # Those will be populated per-read in create_read_context return Gen5DataContext( header_data=HeaderData.create(self.header_data, file_path), read_data=ReadData.create(self.procedure_details), kinetic_data=KineticData.create(self.procedure_details), - results_section=results_section, + results_section=[], # Populated per-read sample_identifiers=get_identifiers(self.layout_section), concentration_values=get_concentrations(self.layout_section), actual_temperature=get_temperature(self.actual_temperature_section), + kinetic_measurements={}, # Populated per-read + kinetic_elapsed_time=[], # Populated per-read + kinetic_errors={}, # Populated per-read + wavelength_section=self.wavelength_section, + ) + + def create_read_context( + self, + base_context: Gen5DataContext, + read_data: ReadData, + read_index: int, + specific_label: str | None = None, + ) -> Gen5DataContext: + """Create a context for a specific ReadData entry with its associated data. + + Args: + base_context: The main context with all data + read_data: The ReadData to process + read_index: The read number (1, 2, 3, etc.) + specific_label: If provided, only process this specific label (for splitting kinetic reads) + """ + # Determine which labels to process + labels_to_process = ( + {specific_label} if specific_label else read_data.measurement_labels + ) + + # Check what data sections exist for this read's labels + # Try Time sections first (kinetic), then Results sections (endpoint) + results_section: list[str] = [] + kinetic_measurements: dict[str, list[float | None]] = {} + kinetic_elapsed_time: list[float] = [] + kinetic_errors: dict[str, list[ErrorDocument]] = {} + + has_time_section = False + has_results_section = False + + # Check if any labels have Time sections (indicating kinetic data) + for label in labels_to_process: + time_key = f"Read {read_index}:{label}" + if time_key in self.time_sections: + has_time_section = True + kinetic_result = get_kinetic_measurements(self.time_sections[time_key]) + if kinetic_result: + km, ket, ke = kinetic_result + # For the first label found, use its kinetic data + if not kinetic_measurements: + kinetic_measurements = km + kinetic_elapsed_time = ket + kinetic_errors = ke + + # Check if any labels have Results sections (indicating endpoint data) + results_key = f"Read {read_index}:{label}" + if results_key in self.sections: + has_results_section = True + + # Based on what sections exist, get the appropriate data + if has_time_section: + # This is a kinetic read - we already loaded the kinetic data above + pass + elif has_results_section: + # This is an endpoint read - get the results section + results_section = self._get_results_for_read(read_index, labels_to_process) + else: + # Fallback - check the combined results section + results_section = self.get_results_section() or [] + + # If specific_label was provided, create a modified ReadData with only that label + if specific_label: + from dataclasses import replace + + read_data = replace(read_data, measurement_labels={specific_label}) + + return Gen5DataContext( + header_data=base_context.header_data, + read_data=[read_data], # Single ReadData for this sub-context + kinetic_data=base_context.kinetic_data if has_time_section else None, + results_section=results_section, + sample_identifiers=base_context.sample_identifiers, + concentration_values=base_context.concentration_values, + actual_temperature=base_context.actual_temperature, kinetic_measurements=kinetic_measurements, kinetic_elapsed_time=kinetic_elapsed_time, kinetic_errors=kinetic_errors, - wavelength_section=self.wavelength_section, + wavelength_section=base_context.wavelength_section, ) + + def _get_results_for_read( + self, read_number: int, measurement_labels: set[str] + ) -> list[str]: + """Get and combine results sections for a specific read.""" + # Find all sections matching this read number and labels + result_sections = [] + for label in sorted(measurement_labels, key=lambda x: (len(x), x)): + section_name = f"Read {read_number}:{label}" + if section_name in self.sections: + result_sections.append(self.sections[section_name][1:]) # Skip header + + if not result_sections: + # Fallback to combined results section if individual sections not found + return self.get_results_section() or [] + + # Combine the sections similar to get_results_section() + self._validate_result_sections(result_sections) + return [ + "Results", + result_sections[0][0], + *[ + section[i + 1] + for i in range(len(result_sections[0]) - 1) + for section in result_sections + ], + ] diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py index 9448cc186..6e4a2fbb8 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py @@ -864,11 +864,17 @@ class MeasurementData: def _get_label(row: pd.Series[Any], measurement_labels: set[str]) -> tuple[str, bool]: raw_label = row.iloc[-1] - if str(raw_label) in measurement_labels: - return str(raw_label), True + label_str = str(raw_label) + + # Strip "Read X:" prefix if present (e.g., "Read 1:450,490" -> "450,490") + if label_str.startswith("Read ") and ":" in label_str: + label_str = label_str.split(":", 1)[1] + + if label_str in measurement_labels: + return label_str, True if isinstance(raw_label, float) and str(int(raw_label)) in measurement_labels: return str(int(raw_label)), True - return str(raw_label), False + return label_str, False def create_results( @@ -952,13 +958,15 @@ def create_results( for measurement in measurements ], ) - for well_position, measurements in well_to_measurements.items() + for well_position, measurements in sorted(well_to_measurements.items()) ] - calculated_data_items = [ - CalculatedDocument( - uuid=random_uuid_str(), - data_sources=[ + calculated_data_items = [] + for well_position, well_calculated_data in sorted(calculated_data.items()): + if well_position not in well_to_measurements: + continue # Skip wells without measurements + for label, value in well_calculated_data: + data_sources = [ DataSource( reference=Referenceable(measurement.identifier), feature=item.read_mode.value.lower(), @@ -967,14 +975,18 @@ def create_results( label, well_to_measurements[well_position] ) for item in read_data - ], - unit=UNITLESS, - name=label, - value=value, - ) - for well_position, well_calculated_data in calculated_data.items() - for label, value in well_calculated_data - ] + ] + # Only create calculated document if we have data sources + if data_sources: + calculated_data_items.append( + CalculatedDocument( + uuid=random_uuid_str(), + data_sources=data_sources, + unit=UNITLESS, + name=label, + value=value, + ) + ) return groups, calculated_data_items @@ -991,14 +1003,6 @@ def create_kinetic_results( kinetic_errors: dict[str, list[ErrorDocument]] | None = None, concentration_values: dict[str, float | None] | None = None, ) -> tuple[list[MeasurementGroup], list[CalculatedDocument]]: - if result_lines[0].strip() != "Results": - msg = f"Expected the first line of the results section '{result_lines[0]}' to be 'Results'." - raise AllotropeConversionError(msg) - - # Create dataframe from tabular data and forward fill empty values in index - data = read_csv(StringIO("\n".join(result_lines[1:])), sep="\t") - data = data.set_index(data.index.to_series().ffill(axis="index").values) - calculated_data: defaultdict[str, list[tuple[str, float]]] = defaultdict( list[tuple[str, float]] ) @@ -1012,21 +1016,29 @@ def create_kinetic_results( for well, errors in kinetic_errors.items(): error_documents_per_well[well].extend(errors) - for row_name, row in data.iterrows(): - label = row.iloc[-1] - for col_index, value in enumerate(row.iloc[:-1]): - well_pos = f"{row_name}{col_index + 1}" - well_value = try_non_nan_float_or_none(value) - # TODO: Report error documents for NaN values - if not well_value: - continue - calculated_data[well_pos].append((label, well_value)) + # Parse calculated data from results section if present + if result_lines and result_lines[0].strip() == "Results": + # Create dataframe from tabular data and forward fill empty values in index + data = read_csv(StringIO("\n".join(result_lines[1:])), sep="\t") + data = data.set_index(data.index.to_series().ffill(axis="index").values) + + for row_name, row in data.iterrows(): + label = row.iloc[-1] + for col_index, value in enumerate(row.iloc[:-1]): + well_pos = f"{row_name}{col_index + 1}" + well_value = try_non_nan_float_or_none(value) + # TODO: Report error documents for NaN values + if not well_value: + continue + calculated_data[well_pos].append((label, well_value)) + + # Get all well positions from kinetic measurements (primary) or calculated data + well_positions = set(kinetic_measurements.keys()) | set(calculated_data.keys()) groups = [ MeasurementGroup( measurement_time=header_data.datetime, - plate_well_count=len(set(data.index.tolist())) - * len(set(data.columns[1:].tolist())), + plate_well_count=header_data.plate_well_count, measurements=[ _create_measurement( measurement := MeasurementData( @@ -1047,7 +1059,7 @@ def create_kinetic_results( ) ], ) - for well_position in calculated_data.keys() + for well_position in sorted(well_positions) ] groups_by_well_position = { @@ -1072,7 +1084,8 @@ def create_kinetic_results( name=label, value=value, ) - for well_position, well_calculated_data in calculated_data.items() + for well_position, well_calculated_data in sorted(calculated_data.items()) + if well_position in groups_by_well_position # Only create for wells with measurements for label, value in well_calculated_data ] diff --git a/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json b/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json new file mode 100644 index 000000000..38232cee7 --- /dev/null +++ b/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json @@ -0,0 +1,37162 @@ +{ + "$asm.manifest": "http://purl.allotrope.org/manifests/plate-reader/REC/2025/03/plate-reader.manifest", + "plate reader aggregate document": { + "plate reader document": [ + { + "measurement aggregate document": { + "measurement document": [ + { + "device control aggregate document": { + "device control document": [ + { + "device type": "plate reader", + "detection type": "Fluorescence", + "detector carriage speed setting": "Normal", + "detector distance setting (plate reader)": { + "value": 7.0, + "unit": "mm" + }, + "detector gain setting": "75", + "number of averages": { + "value": 10.0, + "unit": "#" + }, + "scan position setting (plate reader)": "bottom scan position (plate reader)", + "detector wavelength setting": { + "value": 335.0, + "unit": "nm" + }, + "excitation wavelength setting": { + "value": 295.0, + "unit": "nm" + }, + "custom information document": { + "Reading Type": "Reader" + } + } + ] + }, + "measurement identifier": "AGILENT_GEN5_TEST_ID_0", + "sample document": { + "location identifier": "A1", + "sample identifier": "SPL1", + "well plate identifier": "Plate 1" + }, + "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", + "experimental data identifier": "\\\\zealandpharm.net\\shares\\LabData\\Gemini\\Pharmaceutical_Development\\SynergyH1B\\LP49\\LP49_104\\LP49_104.xpt", + "compartment temperature": { + "value": 40.0, + "unit": "degC" + }, + "fluorescence": { + "value": 18373.0, + "unit": "RFU" + } + }, + { + "device control aggregate document": { + "device control document": [ + { + "device type": "plate reader", + "detection type": "Fluorescence", + "detector carriage speed setting": "Normal", + "detector distance setting (plate reader)": { + "value": 7.0, + "unit": "mm" + }, + "detector gain setting": "75", + "number of averages": { + "value": 10.0, + "unit": "#" + }, + "scan position setting (plate reader)": "bottom scan position (plate reader)", + "detector wavelength setting": { + "value": 350.0, + "unit": "nm" + }, + "excitation wavelength setting": { + "value": 295.0, + "unit": "nm" + } + } + ] + }, + "measurement identifier": "AGILENT_GEN5_TEST_ID_12", + "sample document": { + "location identifier": "A1", + "sample identifier": "SPL1", + "well plate identifier": "Plate 1" + }, + "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", + "experimental data identifier": "\\\\zealandpharm.net\\shares\\LabData\\Gemini\\Pharmaceutical_Development\\SynergyH1B\\LP49\\LP49_104\\LP49_104.xpt", + "compartment temperature": { + "value": 40.0, + "unit": "degC" + }, + "fluorescence": { + "value": 17455.0, + "unit": "RFU" + } + }, + { + "device control aggregate document": { + "device control document": [ + { + "device type": "plate reader", + "detection type": "Fluorescence", + "detector carriage speed setting": "Normal", + "detector distance setting (plate reader)": { + "value": 7.0, + "unit": "mm" + }, + "detector gain setting": "75", + "number of averages": { + "value": 10.0, + "unit": "#" + }, + "scan position setting (plate reader)": "bottom scan position (plate reader)", + "detector wavelength setting": { + "value": 490.0, + "unit": "nm" + }, + "excitation wavelength setting": { + "value": 450.0, + "unit": "nm" + } + } + ] + }, + "measurement identifier": "AGILENT_GEN5_TEST_ID_24", + "sample document": { + "location identifier": "A1", + "sample identifier": "SPL1", + "well plate identifier": "Plate 1" + }, + "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", + "experimental data identifier": "\\\\zealandpharm.net\\shares\\LabData\\Gemini\\Pharmaceutical_Development\\SynergyH1B\\LP49\\LP49_104\\LP49_104.xpt", + "compartment temperature": { + "value": 40.0, + "unit": "degC" + }, + "fluorescence": { + "value": 214.0, + "unit": "RFU" + } + }, + { + "device control aggregate document": { + "device control document": [ + { + "device type": "plate reader", + "detection type": "Fluorescence", + "detector carriage speed setting": "Normal", + "detector distance setting (plate reader)": { + "value": 7.0, + "unit": "mm" + }, + "detector gain setting": "75", + "number of averages": { + "value": 10.0, + "unit": "#" + }, + "detector wavelength setting": { + "value": 490.0, + "unit": "nm" + }, + "number of scans setting": { + 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a/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.txt b/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.txt new file mode 100644 index 000000000..3f483f9bd --- /dev/null +++ b/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.txt @@ -0,0 +1,1993 @@ + + +Software Version 3.15.15 + + + +Experiment File Path: \\zealandpharm.net\shares\LabData\Gemini\Pharmaceutical_Development\SynergyH1B\LP49\LP49_104\LP49_104.xpt +Protocol File Path: J:\Gemini\Pharmaceutical Development\Synergy H1B\Templates\96h continious agitation 40 C.prt + + + +Plate Number Plate 1 +Date 10/14/2024 +Time 2:23:45 PM +Reader Type: Synergy H1 +Reader Serial Number: 24031313 +Reading Type Reader + +Procedure Details + +Plate Type 96 WELL PLATE (Use plate lid) +Eject plate on completion +Set Temperature Setpoint 40°C + Preheat before moving to next step +Read Fluorescence Endpoint + Full Plate + Filter Set 1 + Excitation: 450, Emission: 490 + Optics: Bottom, Gain: 75 + Filter Set 2 + Excitation: 295, Emission: 350 + Optics: Bottom, Gain: 75 + Filter Set 3 + Excitation: 295, Emission: 335 + Optics: Bottom, Gain: 75 + Light Source: Xenon Flash, Lamp Energy: High, Standard Dynamic Range + Read Speed: Normal, Delay: 100 msec, Measurements/Data Point: 10 + Read Height: 7 mm +Start Kinetic Runtime 96:00:00 (HH:MM:SS), Interval 0:10:00, 577 Reads + Shake Double Orbital: Continuous + Frequency: 282 cpm (3 mm) + Read Fluorescence Endpoint + Full Plate + Filter Set 1 + Excitation: 450, Emission: 490 + Optics: Bottom, Gain: 75 + Light Source: Xenon Flash, Lamp Energy: High, Standard Dynamic Range + Read Speed: Normal, Delay: 100 msec, Measurements/Data Point: 10 + Read Height: 7 mm + Read Fluorescence Endpoint + Full Plate + Filter Set 1 + Excitation: 295, Emission: 350 + Optics: Bottom, Gain: 75 + Filter Set 2 + Excitation: 295, Emission: 335 + Optics: Bottom, Gain: 75 + Light Source: Xenon Flash, Lamp Energy: High, Standard Dynamic Range + Read Speed: Normal, Delay: 100 msec, Measurements/Data Point: 10 + Read Height: 7 mm +End Kinetic + +Layout + 1 2 3 4 5 6 7 8 9 10 11 12 +A SPL1 SPL9 SPL17 SPL25 SPL33 SPL41 SPL49 SPL57 SPL65 SPL73 SPL81 SPL89 Well ID +B SPL2 SPL10 SPL18 SPL26 SPL34 SPL42 SPL50 SPL58 SPL66 SPL74 SPL82 SPL90 Well ID +C SPL3 SPL11 SPL19 SPL27 SPL35 SPL43 SPL51 SPL59 SPL67 SPL75 SPL83 SPL91 Well ID +D SPL4 SPL12 SPL20 SPL28 SPL36 SPL44 SPL52 SPL60 SPL68 SPL76 SPL84 SPL92 Well ID +E SPL5 SPL13 SPL21 SPL29 SPL37 SPL45 SPL53 SPL61 SPL69 SPL77 SPL85 SPL93 Well ID +F SPL6 SPL14 SPL22 SPL30 SPL38 SPL46 SPL54 SPL62 SPL70 SPL78 SPL86 SPL94 Well ID +G SPL7 SPL15 SPL23 SPL31 SPL39 SPL47 SPL55 SPL63 SPL71 SPL79 SPL87 SPL95 Well ID +H SPL8 SPL16 SPL24 SPL32 SPL40 SPL48 SPL56 SPL64 SPL72 SPL80 SPL88 SPL96 Well ID + + + +Actual Temperature: 40.0 + +Read 1:450,490 + 1 2 3 4 5 6 7 8 9 10 11 12 +A 214 1636 1678 1660 1895 1933 1940 1812 1858 2075 211 210 Read 1:450,490 +B 221 1607 1693 1812 1962 1974 1859 1697 1742 2691 587 526 Read 1:450,490 +C 217 1525 1569 1683 1789 1941 1880 1623 1656 1747 525 512 Read 1:450,490 +D 220 1211 1234 1239 1424 1427 1433 1197 1225 1530 528 565 Read 1:450,490 +E 203 1207 1212 1156 1319 1374 1386 1174 1228 2589 541 217 Read 1:450,490 +F 210 1603 1609 1601 1791 1857 1859 1617 1525 1906 552 205 Read 1:450,490 +G 217 1255 1262 1581 1400 1419 1442 1378 1418 1443 548 204 Read 1:450,490 +H 206 1121 1165 1183 1352 1387 1487 1242 1286 1332 203 202 Read 1:450,490 + + + +Actual Temperature: 40.0 + +Read 1:295,350 + 1 2 3 4 5 6 7 8 9 10 11 12 +A 17455 29472 29571 29462 29540 29799 29681 29088 29464 29609 17388 17444 Read 1:295,350 +B 17486 29309 29509 29268 29146 29396 28815 29084 29483 29142 15745 15768 Read 1:295,350 +C 17478 28965 29052 28901 28818 28789 29006 28806 29043 29113 15755 15687 Read 1:295,350 +D 17333 30239 30178 30174 29950 30309 30233 29923 29991 29990 15388 15607 Read 1:295,350 +E 17267 30593 30525 29891 30071 30300 30221 30183 30288 30321 15449 17108 Read 1:295,350 +F 17306 30095 30436 30372 29975 30151 30083 29958 30241 30248 15498 17004 Read 1:295,350 +G 17384 15982 15954 15956 15830 15881 15831 15579 15601 15847 15672 17310 Read 1:295,350 +H 17534 16197 16220 16268 16099 16172 16092 16033 15934 16000 17339 17353 Read 1:295,350 + + + +Actual Temperature: 40.0 + +Read 1:295,335 + 1 2 3 4 5 6 7 8 9 10 11 12 +A 18373 28863 28918 28995 29097 29174 29068 28674 28845 28929 18312 18335 Read 1:295,335 +B 18370 28858 29030 28866 28676 28749 28368 28671 28984 28653 16888 16746 Read 1:295,335 +C 18344 28424 28666 28486 28484 28397 28367 28433 28454 28658 16776 16701 Read 1:295,335 +D 18220 29134 29303 29147 29171 29208 29175 28818 28886 28862 16621 16707 Read 1:295,335 +E 18257 29414 29343 28855 29210 29318 29229 29129 29026 29200 16683 17996 Read 1:295,335 +F 18334 29182 29346 29296 29075 29327 29239 29152 29290 29183 16554 18125 Read 1:295,335 +G 18419 17432 17431 17366 17301 17284 17128 17056 16930 17081 16758 18166 Read 1:295,335 +H 18363 17577 17607 17511 17619 17647 17486 17420 17326 17454 18318 18241 Read 1:295,335 + +Read 2:450,490 + +Time T° Read 2:450,490 A1 A2 A3 A4 A5 A6 A7 A8 A9 A10 A11 A12 B1 B2 B3 B4 B5 B6 B7 B8 B9 B10 B11 B12 C1 C2 C3 C4 C5 C6 C7 C8 C9 C10 C11 C12 D1 D2 D3 D4 D5 D6 D7 D8 D9 D10 D11 D12 E1 E2 E3 E4 E5 E6 E7 E8 E9 E10 E11 E12 F1 F2 F3 F4 F5 F6 F7 F8 F9 F10 F11 F12 G1 G2 G3 G4 G5 G6 G7 G8 G9 G10 G11 G12 H1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11 H12 +0:07:31 40.0 211 1114 1182 1171 1295 1307 1337 1277 1287 1436 203 201 194 1161 1221 1317 1393 1385 1310 1240 1282 2477 541 479 210 1107 1167 1249 1270 1324 1313 1206 1223 1231 483 474 205 940 979 973 1086 1103 1099 959 962 1077 487 523 205 917 960 894 1021 1050 1094 961 1008 2328 508 203 202 1297 1322 1338 1416 1470 1399 1261 1250 1617 511 201 204 945 964 1000 1058 1081 1093 1062 1084 1100 505 203 199 846 890 891 1030 1037 1112 977 997 1028 196 196 +0:17:31 40.0 214 972 1006 981 1083 1114 1102 1091 1117 1152 199 201 209 985 1028 1176 1148 1177 1136 1064 1087 1777 529 467 200 936 969 1032 1069 1114 1124 1016 1045 1051 470 458 198 833 851 857 937 969 972 830 857 979 478 503 197 815 854 808 892 903 954 1223 886 1560 487 203 206 1118 1134 1157 1239 1283 1249 1084 1128 1245 485 195 200 848 852 860 924 944 943 931 946 974 476 202 201 774 814 806 920 934 1022 892 891 896 205 188 +0:27:31 40.0 199 926 961 914 1015 1034 1062 1046 1057 1072 200 199 203 934 969 1065 1064 1078 1011 979 1017 1043 523 456 197 894 902 997 983 998 1002 945 947 993 463 456 195 784 787 779 874 892 889 783 802 1093 462 484 187 765 790 735 831 842 884 792 828 1985 478 194 195 1046 1080 1071 1162 1183 1153 1006 1022 1169 469 194 201 817 797 813 848 877 886 860 879 901 469 189 195 728 757 754 848 868 948 843 843 864 194 203 +0:37:31 40.0 199 885 926 918 958 984 1029 985 999 1031 201 201 200 907 916 1014 1009 1011 970 957 977 949 518 450 201 840 859 951 925 944 978 904 909 932 453 450 207 743 759 743 847 843 835 752 778 1048 449 471 191 739 750 704 782 797 825 770 816 1461 468 195 207 991 995 1029 1103 1133 1097 961 1002 1372 480 194 192 790 767 798 803 828 832 826 844 874 460 199 198 713 743 757 819 837 900 801 838 826 188 189 +0:47:31 40.0 192 854 894 862 935 955 988 973 980 1026 198 196 208 893 895 995 1000 994 939 904 947 942 506 459 198 830 834 924 901 915 934 875 889 905 442 441 195 730 734 719 825 828 819 735 764 1029 456 480 183 727 734 710 766 793 798 735 783 1430 468 198 196 972 989 998 1074 1108 1050 935 952 1381 467 197 197 755 742 773 779 802 821 811 819 845 470 197 199 708 726 733 807 809 900 801 797 803 192 190 +0:57:31 40.0 194 851 880 868 934 949 1002 947 978 1019 202 192 207 869 884 968 955 975 920 906 937 918 508 449 197 817 812 900 869 888 917 854 866 880 439 457 196 718 721 726 807 814 811 726 741 1006 444 467 184 730 737 683 737 758 788 747 761 1475 459 195 196 956 969 1020 1037 1087 1029 927 924 1204 469 194 189 746 728 887 774 796 806 793 809 830 469 199 189 708 714 747 797 805 888 779 791 800 189 185 +1:07:31 40.0 209 854 881 854 946 962 1005 945 950 997 200 201 201 839 882 964 950 967 925 892 943 907 511 449 201 798 805 874 868 902 904 851 881 883 444 449 199 709 716 699 790 819 798 720 740 1001 450 480 183 715 728 676 741 743 792 741 760 1440 458 189 201 954 953 1014 1029 1063 1004 896 927 1230 468 190 200 748 721 808 769 791 799 785 806 824 451 198 192 699 692 748 783 793 860 773 796 793 189 182 +1:17:31 40.0 200 849 867 858 924 935 1021 933 968 997 196 198 191 852 866 954 937 950 921 886 928 910 504 449 190 793 799 869 872 883 921 851 841 888 431 438 195 709 711 701 790 800 798 707 746 1022 447 478 189 698 711 679 733 750 779 744 757 1461 460 194 196 966 954 987 1001 1049 990 886 891 1228 466 192 199 741 728 759 772 778 778 785 788 821 469 196 192 697 703 730 757 789 920 777 787 775 187 190 +1:27:31 40.0 194 835 862 844 917 939 1012 933 959 978 193 202 194 834 861 921 946 934 922 898 918 914 513 454 191 789 801 864 859 876 898 842 866 902 447 446 195 690 706 706 781 800 803 708 727 992 434 478 191 697 701 662 727 747 770 727 733 1864 446 192 198 944 953 974 1000 1033 994 883 885 1265 463 201 200 738 725 815 766 777 787 764 780 827 467 193 193 676 695 740 755 782 907 757 766 791 193 190 +1:37:31 40.0 191 828 868 828 923 915 1007 923 955 975 204 208 190 836 850 937 930 936 903 887 924 894 498 448 195 788 797 844 869 866 894 830 852 893 432 441 203 690 698 688 764 785 784 694 719 975 446 466 187 708 698 661 716 746 774 723 749 1762 450 182 202 935 942 980 988 1047 977 871 873 1244 462 195 191 733 717 760 765 789 782 775 762 810 459 195 198 675 684 728 772 783 902 772 767 779 195 193 +1:47:31 40.0 198 840 850 823 898 909 988 944 951 972 201 201 197 847 829 934 925 941 892 894 911 890 500 442 196 785 782 848 841 869 878 828 869 896 428 445 194 677 696 687 773 770 787 694 708 990 442 465 183 683 702 650 719 736 750 717 736 1825 446 198 194 940 916 1015 984 1010 955 849 868 1216 447 196 191 730 721 786 745 762 764 751 793 802 458 189 190 677 689 724 745 769 900 752 752 770 189 189 +1:57:31 40.0 198 821 848 824 905 914 1016 920 948 975 200 194 192 830 835 917 938 941 891 864 903 893 501 447 193 793 791 856 854 871 884 819 842 899 426 442 199 688 709 656 771 764 777 685 705 959 446 474 182 682 692 662 708 735 756 705 741 1884 440 192 194 923 932 1021 973 1031 972 829 865 1191 456 185 195 723 721 746 742 776 762 774 766 806 458 191 187 681 694 720 752 769 823 742 769 769 194 190 +2:07:31 40.0 196 819 853 832 888 916 1011 911 953 984 200 194 197 823 829 924 908 932 892 883 891 898 503 436 191 757 780 832 863 870 874 819 831 885 437 435 201 668 670 692 768 775 768 698 711 964 439 467 185 694 679 661 717 717 754 703 723 1648 456 193 193 926 914 980 975 1022 951 851 859 1186 455 190 195 717 717 748 730 754 768 761 790 803 459 198 194 675 693 716 753 757 808 741 749 767 193 190 +2:17:31 40.0 197 820 848 814 885 1006 959 920 925 964 193 195 200 816 828 917 908 924 894 866 900 885 496 439 196 770 792 841 849 858 875 819 880 885 430 431 193 678 688 679 781 770 767 679 706 950 445 460 177 670 698 656 704 731 756 686 712 1639 447 197 198 920 914 984 946 1012 951 840 874 1117 451 192 198 719 692 791 741 773 759 755 773 789 432 185 193 659 699 714 728 776 807 753 755 774 192 183 +2:27:31 40.0 191 815 849 818 903 2256 997 908 918 967 196 192 193 826 826 913 912 940 885 870 885 884 500 444 197 769 790 827 842 852 865 817 849 893 433 439 190 675 679 673 770 781 772 676 699 946 441 456 183 685 681 652 721 719 748 700 723 1621 453 193 197 920 903 937 966 1015 940 831 835 1187 456 184 192 710 705 769 727 763 749 748 778 796 443 196 191 674 684 714 741 765 815 740 759 756 189 185 +2:37:31 40.0 204 815 838 800 896 914 987 913 934 975 198 196 197 807 826 920 915 926 898 872 900 871 497 447 193 769 775 817 836 861 880 811 813 872 431 429 194 696 681 673 767 771 761 679 691 946 437 453 184 686 688 669 691 722 746 705 716 1979 446 196 193 919 910 970 952 981 938 815 842 1204 459 195 192 701 694 831 742 764 746 748 753 801 446 196 187 673 685 714 737 754 821 738 746 757 195 189 +2:47:31 40.0 199 812 831 822 901 998 993 902 925 967 202 198 200 802 813 905 917 930 889 859 886 863 498 451 189 758 777 825 832 850 870 807 866 868 428 437 199 667 678 664 744 756 757 666 701 945 438 457 197 663 684 669 709 722 751 688 715 1972 439 197 196 887 906 960 950 1012 928 828 841 1213 451 191 190 698 690 776 733 743 752 747 765 771 447 191 191 659 675 706 729 754 811 746 754 746 194 189 +2:57:31 40.0 193 821 837 832 888 1076 977 897 937 970 188 196 198 827 819 897 920 931 876 858 890 877 495 436 194 756 775 823 837 848 858 800 850 883 437 435 192 675 682 675 742 742 769 667 684 950 455 459 186 676 684 656 699 722 746 701 720 1445 462 203 194 891 893 929 949 994 915 796 839 1302 456 184 191 712 700 752 733 754 753 728 773 789 448 189 187 662 676 692 735 746 803 744 744 756 191 192 +3:07:31 40.0 193 827 820 803 889 2852 968 909 917 957 192 192 196 778 812 899 895 930 881 861 892 863 489 434 191 766 766 824 835 851 875 806 876 871 422 435 198 686 697 680 768 768 759 662 699 929 434 453 183 667 677 667 700 705 734 705 718 1400 442 188 197 888 897 942 923 975 905 813 831 1280 455 186 191 712 696 762 725 754 768 739 761 777 445 188 195 669 666 694 729 746 820 732 731 737 189 188 +3:17:31 40.0 199 793 822 820 898 3210 967 916 935 965 191 201 202 796 822 906 895 926 881 866 886 872 504 445 190 746 777 830 834 855 852 812 818 868 439 434 195 662 684 674 760 759 764 668 691 940 438 455 183 672 678 653 703 707 735 702 729 1931 452 195 199 901 898 959 946 1003 907 804 826 1352 449 182 194 714 699 749 744 760 746 751 761 780 449 190 184 662 659 696 742 756 793 718 738 745 189 183 +3:27:31 40.0 190 807 837 807 893 3131 977 879 920 959 194 191 197 807 810 906 914 922 875 852 888 873 486 435 198 765 757 816 841 838 860 799 823 863 429 440 195 663 671 661 757 757 764 655 699 938 432 460 181 660 666 664 701 720 726 691 721 1592 445 195 203 892 901 940 935 996 913 807 827 1408 443 196 192 719 715 723 735 756 757 743 763 780 452 186 194 652 654 705 728 749 802 732 731 750 194 191 +3:37:31 40.0 201 811 829 803 884 3025 975 900 912 961 191 191 198 790 813 907 912 918 855 871 894 855 491 438 197 749 754 799 831 848 873 803 843 843 420 436 196 677 687 676 756 755 741 668 678 961 435 446 189 671 669 658 696 714 735 675 733 1556 450 190 200 898 894 934 949 990 919 801 827 998 452 192 192 716 696 709 746 755 753 747 753 783 451 189 187 655 669 690 722 741 809 714 744 758 192 185 +3:47:31 40.0 194 803 828 808 872 3086 958 891 917 954 192 192 190 796 817 901 905 922 874 858 885 868 506 440 187 764 759 820 833 838 868 798 812 854 420 430 197 664 671 663 745 742 753 670 690 702 433 462 189 672 665 653 696 700 723 695 710 1647 445 186 198 873 899 931 939 980 930 793 809 1023 454 199 191 713 693 707 709 749 765 732 755 777 444 186 192 649 665 700 721 747 800 717 737 745 186 192 +3:57:31 39.9 192 800 814 804 869 3087 978 900 917 957 194 192 199 798 809 899 900 925 880 839 888 861 496 433 195 751 760 802 845 835 853 795 859 861 425 426 198 655 662 642 744 759 753 659 682 678 426 459 179 660 678 656 691 706 740 691 711 1721 441 188 199 893 893 903 924 980 920 805 817 1023 444 191 188 700 694 726 724 739 741 747 759 776 442 193 192 659 670 694 725 734 791 728 739 748 192 187 +4:07:31 40.0 196 820 826 799 874 3218 967 894 924 952 191 197 200 794 805 907 909 915 868 848 877 850 484 442 195 763 774 790 851 836 863 793 812 853 431 443 191 652 659 655 753 769 756 666 691 687 434 463 188 676 670 648 705 715 734 697 712 1413 450 189 188 897 900 938 910 984 901 792 809 1013 449 189 195 720 685 760 743 750 753 745 753 771 445 189 195 668 676 711 728 735 798 718 721 744 196 186 +4:17:31 40.0 193 809 827 800 880 2921 950 882 917 962 196 194 191 788 793 898 896 910 859 852 888 863 490 429 193 758 765 803 836 827 862 796 804 884 430 430 191 670 660 663 745 757 747 657 678 701 434 457 187 667 681 667 698 713 732 693 713 1379 447 191 189 887 884 935 918 971 899 793 807 1002 457 194 190 702 692 768 734 748 756 738 767 765 454 202 191 661 672 692 719 753 789 721 723 750 190 181 +4:27:31 40.0 192 796 828 814 865 3092 986 888 927 962 190 195 197 794 795 899 892 904 864 843 884 873 495 424 194 755 769 797 846 845 861 806 818 848 416 435 200 668 675 658 746 754 759 657 671 691 434 453 189 669 674 643 688 702 724 681 715 1529 437 190 187 891 872 934 924 968 896 787 808 1018 444 180 191 709 688 783 728 748 744 751 747 777 454 193 199 657 653 695 718 733 807 723 741 762 194 182 +4:37:31 40.0 187 803 814 803 874 2658 963 885 923 948 189 194 198 770 802 890 887 899 872 858 893 864 488 434 194 741 772 830 832 835 851 822 812 859 427 432 204 656 672 662 758 766 747 647 682 680 434 456 185 666 685 630 694 701 726 690 694 1609 444 191 192 872 887 902 914 963 885 790 811 1004 441 189 196 706 690 787 726 748 738 735 749 776 446 184 190 668 670 689 715 728 791 713 726 743 191 184 +4:47:31 40.0 197 814 832 796 876 3274 969 893 906 973 192 194 192 787 808 913 889 905 860 839 871 850 498 442 195 746 771 801 835 829 856 807 818 855 431 430 199 669 664 651 741 746 768 657 675 678 437 460 181 670 660 638 703 713 736 681 698 1768 454 187 191 896 876 903 914 975 914 801 803 1116 452 185 196 702 689 806 724 738 736 737 751 790 446 195 186 652 678 685 726 731 785 732 721 747 194 183 +4:57:31 40.0 192 780 821 800 875 3182 983 892 918 940 191 191 198 786 780 910 896 896 864 853 877 873 489 437 192 743 759 813 846 828 829 790 818 857 424 439 188 650 658 652 753 753 751 658 666 696 434 457 183 662 676 632 697 709 720 682 711 1520 442 192 196 878 878 918 914 954 888 783 795 1112 440 185 197 709 687 785 715 754 754 730 756 779 446 191 191 658 678 692 719 743 796 723 726 746 188 186 +5:07:31 39.9 196 785 824 790 884 3222 967 896 917 948 189 197 193 796 805 890 893 909 858 859 871 851 488 442 186 745 769 799 842 832 842 794 800 844 422 425 188 646 667 663 752 766 748 648 678 687 426 447 181 652 673 637 697 696 732 684 721 1647 439 195 194 888 866 915 912 964 898 783 789 1115 441 186 191 694 694 796 723 750 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21840 22054 21948 11877 12119 13569 22718 22618 22081 22332 22442 22357 22171 22137 22318 11949 13477 13632 22488 22591 22512 22122 22354 22238 21995 22348 22421 11948 13432 13688 12472 12332 12345 12231 12169 12120 11967 12036 12151 12114 13448 13832 12586 12542 12522 12457 12433 12337 12334 12274 12395 13705 13611 +55:58:20 40.0 13681 22572 22713 22537 22458 22673 22617 22224 22411 22449 13511 13602 13686 22301 22340 22133 22061 22190 21887 22021 22186 21952 12139 12153 13631 22054 21951 21846 21940 21849 22043 21759 21896 22106 12084 12181 13577 22335 22493 22370 22247 22311 22290 21820 22068 22013 11995 12035 13561 22763 22587 21939 22364 22261 22435 22172 22197 22347 11979 13486 13709 22519 22674 22472 22279 22303 22323 22088 22252 22250 11931 13437 13691 12435 12276 12201 12243 12244 12063 11949 12010 12095 12163 13557 13736 12552 12506 12423 12412 12452 12335 12317 12215 12370 13724 13745 +56:08:20 40.0 13680 22431 22707 22619 22406 22594 22428 22137 22406 22347 13517 13580 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21837 21958 22205 21992 12153 12139 13672 21996 22002 21916 21918 21822 21859 21716 21908 22131 12030 12048 13537 22453 22539 22275 22204 22295 22294 21873 21929 22152 11919 12037 13534 22579 22510 22051 22235 22325 22367 22043 22170 22230 11931 13458 13555 22480 22516 22417 22109 22309 22229 22012 22326 22370 11947 13449 13701 12448 12262 12288 12226 12242 12102 11993 11915 12136 12080 13543 13766 12498 12488 12477 12440 12383 12333 12234 12284 12303 13663 13670 +57:08:20 40.0 13670 22542 22550 22484 22460 22607 22446 22111 22257 22425 13483 13623 13642 22119 22291 22077 22075 22125 21861 21890 22087 22065 12131 12181 13646 22017 21941 21787 21738 21829 21891 21720 21876 21986 12027 12052 13596 22280 22454 22259 22085 22269 22196 21915 22017 21981 11897 12053 13469 22667 22463 21946 22138 22324 22346 21962 22183 22259 11822 13393 13629 22487 22538 22315 22087 22271 22324 21920 22250 22409 11889 13370 13617 12359 12292 12180 12218 12156 12092 11975 11958 12082 12114 13504 13751 12502 12486 12432 12448 12350 12382 12258 12222 12212 13671 13642 +57:18:20 40.0 13637 22545 22506 22556 22334 22605 22407 21996 22354 22474 13505 13654 13603 22203 22272 22030 22072 22129 21893 21798 22130 21949 12135 12081 13582 22000 22084 21798 21847 21872 21858 21696 21773 22044 12008 12044 13603 22342 22456 22250 22005 22278 22155 21918 22039 22082 11915 12052 13500 22749 22494 21973 22195 22269 22288 22178 22234 22300 11917 13422 13606 22509 22607 22392 22060 22281 22261 21985 22263 22282 11927 13395 13686 12360 12315 12123 12162 12177 12060 11995 11984 12088 12092 13505 13809 12502 12550 12433 12437 12382 12278 12342 12152 12428 13611 13627 +57:28:20 40.0 13722 22520 22500 22499 22531 22566 22459 22185 22316 22519 13514 13650 13649 22263 22309 22118 22103 22216 21784 21988 22070 22076 12170 12180 13602 22044 21990 21909 21861 21873 21931 21721 21842 22039 12033 12201 13617 22419 22485 22275 22008 22170 22185 21922 21949 22050 11944 12061 13577 22778 22382 22038 22314 22369 22266 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13668 22036 22022 21855 21758 21775 21920 21718 22066 22030 12039 12094 13619 22436 22426 22262 22076 22231 22286 21789 21927 22022 11922 12105 13532 22665 22543 22070 22354 22434 22271 22154 22186 22375 11925 13503 13577 22465 22571 22423 22184 22313 22288 21993 22291 22273 11919 13437 13701 12444 12259 12321 12204 12185 12095 11966 11981 12078 12161 13519 13750 12592 12480 12489 12455 12395 12298 12266 12279 12414 13648 13613 +57:58:20 40.0 13598 22566 22665 22634 22460 22609 22523 22164 22402 22438 13579 13600 13591 22232 22347 22130 22069 22180 21813 21956 22188 22042 12108 12101 13595 21926 22011 21733 21826 21835 21924 21702 21884 22058 12069 12178 13588 22407 22415 22308 22050 22317 22200 21843 21997 22105 11939 12066 13480 22587 22524 22005 22246 22392 22283 22168 22046 22319 11943 13376 13584 22449 22557 22415 22115 22278 22259 21941 22316 22389 11887 13434 13651 12406 12280 12192 12155 12181 12088 11920 11991 12168 12118 13555 13812 12555 12461 12411 12355 12342 12320 12255 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22228 22269 13378 13559 13581 22055 22176 22115 21958 22027 21709 21806 22089 21760 12027 12012 13557 21911 21843 21727 21721 21715 21808 21531 21790 22002 11933 11958 13469 22213 22342 22224 21982 22197 22097 21732 21940 21894 11846 11892 13415 22534 22317 21897 22190 22203 22172 21910 22007 22182 11823 13292 13467 22372 22385 22266 21986 22212 22053 21761 22085 22237 11900 13252 13481 12293 12148 12134 12093 12059 11977 11857 11863 11985 11966 13401 13685 12359 12371 12362 12310 12330 12224 12234 12082 12250 13478 13538 +69:48:20 40.0 13584 22344 22585 22401 22337 22529 22286 22061 22201 22182 13364 13521 13537 22079 22264 22027 21833 21977 21699 21837 21990 21782 11964 12023 13454 21873 21937 21682 21711 21727 21866 21707 21843 22008 11935 12021 13521 22189 22309 22220 21988 22095 22145 21644 21829 21918 11839 11954 13483 22542 22435 21892 22172 22267 22174 21970 22028 22342 11864 13287 13514 22303 22477 22318 22043 22110 22077 21789 22174 22200 11810 13327 13582 12296 12095 12111 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21944 11910 11987 13451 22536 22469 21918 22219 22311 22174 22045 21998 22185 11893 13326 13544 22355 22517 22271 22047 22187 22135 21690 22272 22129 11780 13315 13615 12288 12159 12165 12090 12081 11970 11905 11823 11989 11974 13415 13688 12446 12442 12393 12373 12294 12175 12226 12224 12233 13560 13428 +70:18:20 40.0 13514 22393 22502 22475 22369 22518 22440 22051 22204 22327 13409 13431 13491 22150 22173 21958 22044 22108 21787 21724 22079 21896 12032 12104 13579 21984 21958 21710 21739 21738 21794 21552 21756 21988 11979 12027 13532 22322 22424 22291 21944 22283 22076 21741 21992 21980 11860 11861 13389 22616 22329 21903 22184 22336 22119 21886 22094 22165 11811 13369 13469 22463 22409 22246 22064 22225 22098 21834 22240 22343 11830 13360 13553 12369 12210 12203 12100 12075 12044 11816 11807 12027 11997 13487 13693 12457 12339 12337 12302 12339 12269 12205 12157 12283 13565 13574 +70:28:20 40.0 13559 22441 22488 22518 22431 22558 22354 22022 22215 22374 13406 13525 13551 22125 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22148 21877 12047 12126 13546 22013 22018 21849 21729 21821 21740 21628 21824 21888 11947 12078 13538 22386 22449 22203 22048 22227 22151 21759 21913 21994 11933 11951 13477 22665 22377 21957 22261 22335 22163 22005 22215 22285 11873 13388 13540 22385 22616 22397 21989 22221 22201 21893 22269 22310 11866 13351 13625 12346 12150 12179 12166 12140 12032 11867 11849 12052 12040 13491 13745 12434 12406 12424 12375 12309 12227 12193 12131 12283 13590 13585 +71:28:20 40.0 13616 22477 22698 22454 22402 22560 22502 22032 22297 22392 13462 13546 13481 22205 22309 21989 21977 22165 21810 21882 22118 22037 12059 12133 13530 21941 22029 21811 21746 21760 21922 21654 21827 22139 11956 12073 13488 22419 22586 22288 22004 22321 22137 21776 22002 22070 11881 11957 13518 22726 22384 21924 22288 22226 22227 22030 22031 22297 11852 13248 13527 22404 22511 22387 22045 22310 22131 21932 22182 22281 11864 13444 13640 12362 12230 12207 12145 12142 12059 11874 11942 11996 12046 13385 13757 12429 12462 12409 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13510 13595 +72:28:20 40.0 13552 22506 22611 22478 22402 22558 22453 22012 22198 22370 13417 13511 13541 22116 22303 22031 21923 22023 21880 21833 21996 21940 11995 12121 13525 22039 21926 21708 21874 21823 21889 21678 21869 21937 11929 12083 13503 22406 22517 22295 22106 22256 22157 21647 21978 22041 11862 11981 13502 22595 22462 22065 22246 22235 22174 22099 21995 22246 11854 13388 13557 22397 22606 22331 22091 22233 22171 21784 22199 22304 11832 13291 13661 12348 12200 12139 12063 12127 12020 11915 11932 12037 12004 13362 13705 12459 12434 12353 12297 12261 12198 12238 12204 12285 13495 13501 +72:38:20 40.0 13617 22477 22523 22448 22304 22408 22360 21852 22199 22341 13419 13560 13581 22122 22279 21926 21976 21968 21702 21800 22006 22082 12070 12035 13526 21847 21848 21638 21671 21732 21851 21553 21731 21982 11986 11984 13443 22182 22326 22220 22008 22198 22106 21653 21945 22046 11794 11916 13478 22465 22347 21800 22068 22304 22178 21983 22068 22207 11755 13271 13460 22392 22434 22269 22029 22337 22155 21779 22136 22211 11829 13264 13576 12294 12186 12159 12057 12107 11978 11860 11913 12009 11936 13419 13707 12430 12408 12335 12322 12285 12212 12177 12115 12222 13442 13525 +72:48:20 40.0 13580 22385 22528 22446 22376 22433 22338 22045 22112 22321 13419 13556 13606 22064 22294 21985 21937 21955 21666 21902 22052 21904 11991 12125 13552 21958 21924 21722 21637 21824 21802 21593 21748 21852 11959 12010 13473 22241 22354 22221 22022 22186 22030 21772 21991 21957 11815 11868 13488 22572 22417 21844 22105 22355 22256 22049 21965 22147 11837 13297 13497 22333 22351 22328 21977 22171 22162 21908 22223 22158 11835 13230 13615 12275 12182 12163 12079 12064 11992 11806 11808 12010 12018 13434 13617 12411 12359 12373 12324 12317 12221 12213 12058 12164 13449 13590 +72:58:20 40.0 13539 22484 22519 22507 22317 22593 22394 22006 22173 22340 13337 13409 13479 22146 22140 21925 21976 21940 21637 21910 21938 21871 12071 12075 13579 21933 21945 21697 21652 21708 21808 21579 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22368 22533 22484 22284 22523 22374 22056 22236 22239 13335 13473 13537 21997 22203 22006 22032 22005 21717 21942 21978 22010 11992 12064 13464 21869 21884 21763 21737 21713 21758 21508 21776 21874 11957 11932 13539 22225 22285 22146 21997 22114 21986 21605 21784 21908 11792 11970 13467 22600 22385 21924 22221 22119 22199 21866 22067 22233 11801 13295 13485 22329 22463 22253 22051 22138 22101 21915 22059 22156 11766 13301 13536 12296 12137 12103 12042 11996 11982 11853 11856 12009 11993 13378 13671 12413 12383 12414 12305 12260 12251 12198 12105 12253 13465 13512 +73:28:20 40.0 13526 22410 22534 22255 22234 22473 22341 21943 22166 22166 13454 13437 13521 22007 22120 21870 21977 21922 21615 21637 21912 21790 11957 12014 13514 21918 21854 21689 21715 21856 21806 21584 21737 21864 11913 11966 13459 22217 22441 22239 21916 22143 22012 21751 21867 21804 11835 11973 13452 22521 22406 21739 22092 22200 22219 21827 21934 22113 11828 13324 13446 22351 22408 22302 22034 22118 22110 21757 22033 22142 11837 13260 13513 12215 12142 12154 12056 12044 11925 11804 11831 11966 12043 13419 13647 12380 12359 12345 12260 12315 12131 12099 12151 12173 13502 13540 +73:38:20 40.0 13556 22335 22458 22435 22237 22417 22334 21888 22162 22206 13393 13445 13524 22035 22148 21928 21878 21917 21719 21615 22000 21785 11922 11988 13535 21784 21791 21570 21697 21642 21695 21541 21686 21944 11927 11953 13443 22235 22290 22045 21825 22069 22035 21599 21754 21956 11825 11903 13391 22452 22294 21857 22105 22233 22254 21957 21947 22212 11794 13260 13478 22300 22458 22344 22044 22076 22079 21839 22094 22116 11798 13317 13610 12225 12214 12094 12085 12085 11946 11876 11838 11976 12003 13420 13629 12388 12389 12344 12297 12314 12224 12211 12092 12233 13490 13455 +73:48:20 40.0 13495 22343 22447 22458 22162 22373 22304 21862 22076 22285 13456 13413 13424 22090 22147 21936 21907 21999 21603 21678 21936 21718 12004 12013 13493 21836 21915 21685 21669 21596 21684 21568 21719 21863 11928 11940 13391 22154 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21664 21670 21534 21506 21581 21608 21347 21466 21724 11860 11942 13328 22044 22240 22019 21814 21878 21935 21531 21708 21762 11775 11845 13300 22380 22282 21722 21974 21955 22009 21832 21832 21919 11697 13178 13355 22163 22306 22039 21841 21839 21936 21667 21917 21976 11724 13207 13381 12168 12070 11987 12014 12048 11839 11664 11811 11890 11820 13286 13619 12321 12304 12253 12190 12171 12093 12022 11970 12200 13445 13419 +76:48:20 39.9 13328 22159 22316 22358 22088 22252 22156 21664 21864 22038 13280 13382 13334 21850 22057 21756 21749 21738 21486 21611 21833 21578 11880 11941 13372 21694 21600 21442 21509 21569 21590 21402 21538 21583 11742 11828 13325 22190 22177 22066 21777 21881 21846 21565 21555 21574 11677 11831 13259 22383 22176 21628 21945 22116 22081 21727 21785 21901 11663 13168 13329 22018 22157 22007 21781 21910 21955 21661 21895 21960 11763 13188 13451 12220 12103 11987 11945 11914 11901 11721 11733 11928 11895 13282 13511 12347 12260 12214 12190 12179 12107 12109 11993 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21895 22005 11739 13060 13367 12229 12006 12042 11861 11946 11869 11622 11771 11876 11871 13329 13517 12279 12310 12238 12210 12168 12128 12040 12062 12092 13442 13282 +78:08:20 40.0 13338 22172 22416 22164 22061 22368 22073 21690 21881 21977 13264 13469 13362 22000 22016 21661 21693 21798 21527 21506 21753 21625 11839 11912 13401 21720 21605 21569 21372 21487 21546 21368 21572 21707 11789 11879 13310 22058 22196 21945 21764 21790 21792 21485 21631 21643 11681 11855 13280 22311 22224 21744 21865 22025 21966 21583 21789 21936 11675 13195 13389 22207 22270 22018 21844 21952 21968 21616 21889 21921 11729 13187 13445 12102 12049 11981 11979 11896 11859 11682 11706 11878 11846 13307 13496 12287 12208 12251 12232 12108 12122 12076 12014 12144 13384 13380 +78:18:20 40.0 13424 22172 22306 22186 22018 22352 22208 21643 21908 21993 13248 13310 13343 21897 22027 21692 21613 21805 21402 21518 21743 21622 11887 11924 13374 21648 21589 21412 21454 21427 21612 21270 21578 21611 11842 11859 13284 21999 22097 21894 21826 21891 21873 21376 21713 21721 11663 11741 13324 22216 22064 21683 21785 21946 22064 21770 21743 21948 11719 13132 13347 22093 22273 21932 21836 21802 21826 21608 21825 21968 11661 13159 13370 12202 12018 11992 11891 11924 11831 11727 11752 11868 11809 13233 13579 12238 12247 12227 12207 12082 12077 12071 11945 12080 13414 13313 +78:28:20 40.0 13342 22150 22250 22084 22042 22180 22123 21691 21803 21996 13204 13321 13329 21762 21981 21759 21578 21721 21502 21532 21725 21591 11807 11915 13349 21578 21620 21506 21472 21487 21509 21327 21502 21525 11782 11907 13308 22039 22244 21894 21697 21780 21713 21500 21544 21674 11628 11775 13279 22127 22123 21614 21850 21914 21964 21689 21619 21956 11687 13189 13280 22132 22229 21963 21712 21797 22003 21516 21804 21819 11618 13135 13435 12116 12071 11910 11906 11894 11811 11652 11757 11845 11740 13255 13448 12252 12278 12199 12138 12102 12061 12107 12002 12114 13330 13303 +78:38:20 40.0 13394 21993 22226 22163 21982 22320 22135 21716 21837 22053 13233 13349 13348 21917 21872 21773 21666 21744 21432 21535 21757 21567 11874 11889 13370 21708 21644 21433 21316 21451 21571 21364 21500 21618 11769 11840 13289 21959 22161 21969 21832 21856 21809 21327 21573 21503 11601 11796 13270 22241 22119 21581 21865 21863 22043 21700 21758 21919 11624 13193 13394 22020 22170 22038 21745 21935 21844 21659 21847 21910 11669 13092 13327 12174 11974 11937 11951 11908 11798 11730 11715 11876 11772 13221 13406 12196 12190 12173 12099 12116 12069 11954 12000 12100 13363 13408 +78:48:20 40.0 13359 22209 22274 22104 22027 22356 22132 21759 21820 21917 13230 13317 13312 21782 22024 21790 21691 21790 21477 21482 21640 21615 11906 11880 13438 21520 21517 21435 21402 21497 21500 21307 21391 21676 11819 11868 13331 21924 22145 21933 21753 21900 21815 21300 21637 21537 11657 11782 13247 22209 22200 21614 21819 21968 21944 21674 21782 21967 11579 13163 13311 22145 22211 22013 21719 21871 21823 21381 21785 21967 11677 13140 13456 12070 11984 11942 11936 11945 11783 11683 11754 11928 11840 13268 13503 12247 12241 12248 12177 12110 12114 12013 11942 12064 13336 13393 +78:58:20 40.0 13438 22104 22258 22129 22059 22265 22074 21652 21782 21921 13241 13319 13345 21846 21915 21704 21653 21796 21383 21454 21759 21591 11784 11992 13356 21505 21551 21451 21427 21448 21493 21343 21515 21604 11738 11801 13311 21924 22007 21908 21810 21852 21878 21397 21562 21685 11659 11802 13258 22256 21997 21621 21851 21900 21947 21629 21681 21935 11662 13086 13308 22081 22235 21993 21796 21844 21903 21528 21781 21854 11691 13176 13408 12115 12068 11947 11920 11929 11907 11747 11679 11807 11836 13239 13536 12203 12283 12160 12178 12196 12143 11993 11954 12120 13467 13353 +79:08:20 40.0 13376 22148 22256 22006 22111 22162 22035 21659 21883 22022 13246 13355 13330 21767 21914 21760 21659 21767 21467 21439 21765 21620 11820 11894 13392 21517 21581 21480 21348 21494 21463 21259 21455 21657 11791 11848 13245 21989 22119 21867 21629 21734 21734 21494 21505 21591 11630 11739 13249 22180 22047 21569 21835 21994 22017 21651 21708 21933 11684 13143 13382 22002 22197 22006 21694 21838 21857 21638 21862 21922 11657 13114 13417 12138 12039 12000 11976 11916 11844 11641 11723 11835 11882 13228 13397 12279 12141 12157 12180 12091 11935 12005 11955 12065 13410 13358 +79:18:20 40.0 13365 22090 22159 22271 22087 22057 22177 21770 21841 21983 13314 13327 13301 21777 21910 21735 21677 21761 21428 21579 21743 21516 11786 11930 13375 21695 21724 21358 21413 21424 21471 21341 21399 21647 11739 11913 13332 21965 22081 21919 21735 21876 21759 21354 21475 21602 11672 11751 13296 22285 21980 21531 21812 21969 21975 21625 21761 21977 11666 13103 13243 22164 22301 22017 21738 21872 21937 21653 21840 21786 11720 13127 13426 12178 12058 11999 11926 11967 11856 11725 11742 11865 11844 13294 13514 12278 12268 12212 12207 12089 12102 12023 12008 12133 13304 13363 +79:28:20 40.0 13359 22164 22212 22226 22048 22211 22093 21631 22000 22108 13236 13392 13353 21864 21990 21652 21548 21645 21412 21516 21765 21639 11852 11916 13376 21536 21836 21506 21556 21439 21483 21364 21553 21671 11808 11821 13303 22032 22122 21981 21795 21945 21878 21443 21560 21717 11703 11704 13258 22392 22096 21590 21848 21951 21986 21686 21785 21917 11715 13144 13276 22136 22229 21965 21607 21902 21877 21534 21878 21890 11589 13102 13403 12110 12044 11987 11861 12014 11842 11768 11735 11871 11858 13243 13467 12314 12208 12223 12169 12197 12029 12047 11989 12063 13387 13357 +79:38:20 40.0 13387 22123 22163 22119 22102 22305 22149 21725 21806 22166 13206 13331 13323 21760 21898 21768 21695 21885 21469 21661 21853 21498 11861 11873 13341 21617 21622 21429 21485 21560 21584 21353 21601 21652 11819 11890 13298 22071 22202 21896 21780 21861 21708 21357 21622 21578 11702 11787 13195 22287 22206 21724 21873 21971 21878 21663 21755 21948 11640 13088 13324 22127 22227 22080 21813 21865 21840 21585 21797 21956 11666 13103 13370 12131 12064 11956 11916 11924 11786 11781 11708 11874 11854 13225 13554 12297 12220 12203 12149 12180 12153 12077 12063 12017 13341 13344 +79:48:20 40.0 13388 22140 22173 22171 22134 22171 22003 21622 21768 21957 13130 13253 13253 21797 21947 21773 21663 21861 21434 21450 21700 21486 11861 11914 13391 21590 21667 21445 21399 21614 21551 21379 21461 21650 11822 11859 13267 21973 22061 21842 21692 21880 21813 21335 21564 21637 11702 11800 13247 22297 22012 21695 21886 21986 21948 21692 21704 21912 11672 13132 13294 22117 22213 22043 21740 21806 21824 21551 21814 21932 11690 13083 13386 12112 12011 11955 11882 11960 11822 11760 11703 11852 11744 13226 13534 12239 12253 12165 12206 12089 12091 12049 12014 12045 13313 13379 +79:58:20 40.0 13346 22152 22086 22107 21960 22234 22017 21834 21799 21958 13246 13302 13294 21848 22023 21678 21616 21751 21443 21369 21712 21650 11851 11873 13365 21656 21609 21355 21536 21456 21513 21364 21459 21774 11832 11858 13293 22030 22150 21919 21672 21852 21607 21413 21583 21570 11657 11784 13226 22214 22050 21643 21781 21972 21954 21609 21768 21845 11635 13124 13436 22140 22245 21941 21737 21926 21932 21561 21895 21849 11689 13155 13359 12080 12031 12021 11972 11880 11797 11756 11784 11872 11851 13229 13457 12272 12268 12211 12197 12108 12125 12004 11955 12078 13301 13396 +80:08:20 39.9 13346 22210 22289 22162 22067 22264 22051 21705 21892 21962 13247 13294 13307 21843 21898 21681 21630 21711 21451 21443 21681 21585 11813 11884 13388 21775 21687 21451 21377 21431 21524 21426 21460 21682 11685 11808 13233 22035 22037 21989 21645 21874 21907 21358 21611 21611 11695 11747 13202 22159 22133 21531 21815 21955 21967 21611 21704 21871 11716 13230 13294 22042 22166 22016 21703 21892 21888 21499 21895 21848 11582 13210 13453 12196 11941 11972 12002 11905 11810 11661 11679 11872 11820 13297 13515 12281 12211 12187 12148 12082 12112 11978 11957 12051 13376 13329 +80:18:20 40.0 13353 22150 22376 22156 22145 22146 22054 21606 21782 21931 13195 13257 13311 21878 21881 21647 21499 21671 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21639 21699 21914 11657 13157 13286 22099 22157 21968 21620 21880 21810 21517 21795 21812 11640 13130 13439 12160 11972 11969 11893 11939 11784 11622 11687 11852 11829 13235 13410 12263 12213 12177 12190 12099 11964 11966 11951 12118 13321 13313 +80:58:20 40.0 13220 22037 22216 22150 22065 22183 22025 21762 21784 21844 13144 13293 13270 21833 21994 21659 21562 21619 21373 21412 21633 21436 11864 11913 13315 21518 21510 21498 21397 21395 21500 21288 21404 21553 11804 11777 13258 21841 22035 21809 21701 21676 21703 21294 21511 21519 11532 11736 13260 22193 21984 21604 21850 21942 21989 21508 21782 21829 11603 13123 13243 21994 22160 21948 21749 21884 21765 21593 21819 21915 11580 13066 13375 12065 12004 11951 11925 11910 11706 11652 11654 11758 11794 13175 13436 12235 12159 12071 12120 12119 12032 12004 11929 12021 13335 13236 +81:08:20 40.0 13244 22136 22203 22159 21990 22182 22070 21560 21740 21996 13159 13252 13297 21818 21858 21679 21610 21731 21297 21335 21643 21545 11841 11834 13316 21568 21492 21334 21275 21417 21443 21315 21510 21614 11758 11846 13269 21916 22017 21756 21670 21874 21727 21261 21600 21642 11611 11761 13161 22122 22060 21558 21810 21924 21903 21464 21649 21888 11591 13063 13290 22038 22177 21902 21652 21830 21688 21509 21764 21823 11656 13148 13304 12083 12003 11920 11924 11810 11790 11662 11665 11785 11812 13134 13455 12182 12130 12097 12137 12111 11984 11983 11914 12056 13343 13263 +81:18:20 40.0 13355 22036 22115 22139 22018 22081 22061 21639 21766 21895 13181 13331 13216 21832 21942 21545 21652 21658 21369 21513 21605 21509 11813 11868 13244 21580 21504 21329 21273 21462 21534 21211 21508 21711 11700 11794 13347 21954 22123 21967 21638 21855 21794 21334 21532 21638 11676 11758 13241 22041 22047 21522 21664 21922 21900 21664 21643 21912 11698 13035 13347 22086 22275 21874 21703 21870 21831 21547 21807 21847 11677 13072 13378 12168 11984 11956 11881 11903 11771 11714 11716 11839 11789 13172 13372 12255 12191 12193 12088 12058 12001 11942 11957 12053 13363 13309 +81:28:20 40.0 13288 22093 22193 22107 22049 22175 21995 21738 21777 22054 13210 13350 13345 21738 21880 21741 21642 21728 21464 21488 21717 21526 11819 11885 13339 21611 21540 21402 21373 21397 21558 21358 21530 21668 11716 11784 13257 21998 22073 21790 21766 21812 21806 21517 21517 21681 11624 11829 13182 22285 22154 21571 21820 21940 21855 21589 21742 21797 11652 13099 13285 21971 22067 21957 21770 21910 21836 21623 21817 21839 11638 13105 13322 12088 12048 11952 11873 11833 11847 11696 11712 11848 11818 13250 13399 12331 12189 12179 12072 12089 12030 11967 11946 12078 13362 13305 +81:38:20 40.0 13378 22115 22208 22173 21979 22324 22047 21638 21731 21913 13244 13392 13275 21723 21953 21714 21517 21701 21336 21512 21665 21587 11809 11859 13285 21647 21548 21302 21368 21447 21536 21216 21577 21514 11789 11746 13178 21944 22104 21833 21715 21839 21715 21317 21624 21612 11648 11634 13254 22102 22189 21690 21890 21903 21940 21705 21723 21859 11624 13137 13188 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21537 21301 21552 21678 11802 11824 13236 21978 22172 21872 21629 21888 21739 21416 21576 21555 11625 11722 13226 22320 22085 21707 21668 21902 21873 21627 21733 21870 11610 13113 13216 22142 22088 22030 21800 21927 21784 21481 21812 21741 11657 13078 13408 12102 11993 11983 11892 11879 11874 11765 11666 11872 11778 13199 13451 12237 12267 12216 12127 12081 12050 12008 11944 12045 13298 13315 +82:08:20 40.0 13296 22141 22205 22058 22141 22157 22136 21624 21864 21942 13269 13288 13259 21825 22054 21580 21634 21635 21398 21605 21713 21642 11762 11925 13346 21663 21620 21287 21380 21378 21510 21302 21497 21596 11726 11788 13250 21857 22107 21865 21730 21816 21768 21381 21452 21517 11646 11689 13221 22185 22007 21530 21772 22028 21753 21654 21727 21801 11648 13089 13252 22110 22197 21973 21728 21736 21748 21547 21873 21783 11615 13112 13415 12179 11994 11963 11908 11993 11771 11667 11721 11871 11753 13224 13441 12202 12163 12153 12064 12074 11999 11992 12027 12073 13387 13286 +82:18:20 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21448 21720 21829 11643 13116 13331 12056 11965 11871 11831 11877 11797 11662 11685 11782 11738 13175 13465 12255 12225 12091 12104 12113 11986 11974 11983 12104 13284 13248 +82:38:20 40.0 13366 22032 22173 22151 21962 22116 22001 21616 21847 21907 13222 13277 13257 21771 21956 21778 21530 21714 21432 21415 21720 21479 11854 11824 13319 21484 21610 21348 21387 21412 21452 21286 21540 21546 11745 11755 13246 21989 22061 21890 21556 21847 21829 21347 21453 21648 11656 11793 13200 22319 22067 21547 21845 21761 21838 21590 21645 21817 11607 13015 13297 21968 22214 21988 21741 21874 21846 21422 21740 21911 11622 13098 13381 12096 11960 11918 11909 11879 11743 11624 11673 11856 11852 13178 13452 12216 12264 12204 12119 12055 12013 11974 12019 12029 13361 13383 +82:48:20 40.0 13334 22017 22129 22129 21923 22122 21954 21611 21758 21973 13089 13323 13381 21749 21910 21746 21598 21668 21350 21362 21833 21470 11819 11842 13215 21460 21614 21475 21306 21496 21432 21233 21519 21576 11735 11823 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21532 21389 21415 21446 21197 21434 21464 12984 14463 14787 13615 13547 13497 13506 13401 13325 13179 13215 13435 13173 14672 14843 13763 13776 13725 13686 13630 13580 13476 13524 13653 14808 14696 +31:29:10 40.0 14711 21900 21876 21866 21894 21985 21849 21592 21699 21834 14665 14666 14653 21619 21743 21358 21475 21685 21334 21370 21680 21402 13177 13179 14707 21479 21473 21250 21263 21274 21328 21310 21357 21475 13123 13069 14578 21507 21568 21506 21350 21439 21381 20975 21197 21319 12973 13047 14583 21799 21541 21248 21363 21456 21413 21226 21416 21564 12993 14530 14684 21640 21674 21554 21224 21409 21392 21186 21574 21521 12961 14435 14740 13574 13589 13488 13427 13453 13296 13217 13240 13456 13140 14574 14848 13846 13756 13745 13698 13726 13570 13627 13564 13556 14820 14737 +31:39:10 40.0 14691 21916 21987 21938 21845 21964 21847 21615 21699 21820 14589 14739 14634 21691 21718 21513 21624 21530 21428 21496 21670 21510 13177 13203 14645 21416 21413 21257 21351 21275 21372 21232 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21233 21416 21513 14326 14387 14363 21275 21523 21291 21295 21280 20996 20979 21206 21160 12930 12922 14376 21087 21044 21003 21088 21016 21111 20981 20979 21200 12830 12878 14299 21321 21325 21258 21043 21188 21182 20661 20730 20786 12684 12767 14358 21520 21309 20918 21121 21146 21296 20961 21045 21167 12753 14270 14357 21483 21381 21153 21070 21083 21242 20849 21127 21196 12754 14223 14451 13389 13356 13226 13261 13131 13108 12918 12963 13061 12912 14280 14487 13507 13528 13486 13419 13393 13257 13256 13213 13418 14469 14430 +56:19:10 40.0 14353 21574 21670 21598 21412 21670 21505 21082 21348 21506 14298 14388 14371 21374 21422 21224 21125 21349 21135 20964 21250 21120 12859 12920 14363 21018 21126 21006 21076 21038 21106 20900 20951 21168 12824 12894 14313 21289 21173 21194 21131 21181 21116 20681 20756 20870 12757 12887 14290 21512 21374 20930 21196 21209 21230 20996 21022 21241 12708 14234 14401 21358 21427 21175 21006 21193 21096 20981 21230 21144 12751 14212 14429 13396 13240 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40.0 13993 20978 21196 21127 20977 21249 20967 20650 20746 20830 13888 13981 13986 20752 21008 20695 20682 20791 20527 20431 20619 20578 12570 12480 14021 20623 20651 20550 20453 20543 20584 20302 20460 20585 12444 12505 14015 20811 20861 20714 20537 20581 20678 20021 20210 20232 12296 12483 13946 21112 20793 20469 20671 20842 20692 20343 20396 20595 12349 13890 13983 20877 20913 20833 20565 20763 20732 20315 20519 20570 12374 13852 14061 12980 12927 12902 12819 12836 12684 12583 12606 12749 12604 13965 14132 13103 13129 13103 13047 13115 13001 12929 12950 12996 13985 14009 +87:49:10 39.9 14031 20964 21119 21165 20981 21169 21061 20529 20763 20841 13922 13980 13950 20892 20971 20696 20639 20785 20481 20511 20697 20490 12562 12596 13995 20645 20609 20498 20552 20524 20595 20371 20517 20540 12465 12472 13909 20754 20836 20682 20531 20630 20719 19986 20294 20198 12367 12493 13968 21023 20812 20431 20487 20675 20743 20367 20427 20512 12353 13788 13948 20867 20989 20798 20479 20624 20613 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13945 20902 20813 20707 20661 20701 20577 20029 20344 20272 12394 12395 13919 21042 20841 20409 20602 20748 20677 20425 20398 20593 12334 13747 13977 20875 20974 20854 20546 20727 20705 20376 20498 20659 12353 13778 14030 13067 12898 12893 12817 12848 12726 12607 12565 12856 12585 13859 14178 13226 13069 13143 13166 13056 12955 12979 12937 13054 14052 14022 +88:19:10 40.0 14049 21138 21101 21122 21005 21191 21010 20605 20823 20868 13891 13989 14021 20844 21045 20769 20695 20780 20504 20522 20677 20561 12584 12624 14009 20683 20702 20582 20523 20478 20582 20373 20512 20646 12477 12552 13968 20850 20859 20764 20626 20628 20678 20167 20189 20273 12396 12454 13897 21001 20856 20524 20612 20744 20719 20361 20423 20583 12453 13787 13956 20825 21023 20780 20538 20750 20679 20279 20577 20599 12410 13805 14097 13008 12977 12908 12867 12802 12654 12616 12622 12770 12539 13903 14134 13215 13201 13125 12991 13050 12989 12953 12900 12977 14059 14036 +88:29:10 40.0 14033 21061 21093 21019 21043 21200 21004 20590 20783 20978 13825 13962 14019 20813 20863 20826 20643 20726 20395 20445 20595 20458 12553 12591 14019 20595 20574 20516 20516 20500 20585 20309 20440 20606 12507 12492 13845 20785 20846 20720 20540 20604 20595 20198 20146 20137 12385 12461 13862 21045 20844 20399 20639 20623 20594 20246 20298 20504 12368 13719 13949 20881 20853 20817 20615 20572 20635 20340 20575 20514 12377 13694 13993 12995 12940 12831 12817 12824 12707 12602 12568 12706 12563 13857 14106 13117 13158 13127 12962 13068 13034 12919 12886 12946 14037 13937 +88:39:10 40.0 14005 21031 21183 21177 21023 21140 21028 20611 20891 20918 13823 13950 13910 20643 20924 20791 20741 20856 20503 20490 20661 20615 12538 12557 13941 20596 20524 20494 20521 20521 20569 20311 20480 20528 12492 12438 13979 20838 20915 20602 20487 20732 20571 19921 20256 20224 12392 12424 13902 20927 20742 20408 20541 20674 20718 20273 20431 20586 12337 13787 13966 20866 20927 20800 20525 20736 20661 20326 20603 20572 12366 13740 14095 13057 12934 12877 12774 12784 12709 12604 12591 12806 12563 13887 14077 13157 13069 13071 13041 12977 12904 12943 12891 12905 14096 14040 +88:49:10 40.0 14024 21057 21117 20918 20968 21209 21149 20534 20746 20864 13819 13902 14024 20881 20989 20813 20746 20706 20506 20533 20597 20527 12550 12557 13926 20722 20582 20362 20555 20547 20695 20308 20518 20695 12448 12487 13993 20736 20869 20722 20517 20595 20654 20089 20210 20296 12375 12526 13957 20989 20861 20505 20633 20652 20633 20350 20337 20624 12353 13805 13993 21037 20801 20832 20551 20740 20636 20349 20668 20558 12397 13833 14068 12972 12834 12856 12846 12805 12705 12563 12625 12785 12481 13870 14192 13058 13164 13119 13068 13064 13005 12942 12909 12972 13923 14033 +88:59:10 40.0 14076 21072 21171 21152 21033 21163 20964 20627 20755 20787 13850 13958 13930 20799 21039 20777 20735 20754 20530 20448 20674 20544 12657 12599 13951 20547 20643 20481 20409 20548 20681 20296 20528 20624 12468 12513 13860 20832 20849 20638 20502 20642 20544 20025 20149 20271 12343 12515 13953 21065 20796 20455 20608 20700 20613 20406 20262 20541 12366 13748 13988 20938 20891 20871 20504 20640 20711 20405 20625 20696 12443 13799 14038 13063 12945 12872 12842 12774 12707 12572 12594 12756 12538 13882 14069 13140 13139 13061 13084 13061 12895 12910 12969 12953 14093 13934 +89:09:10 40.0 13989 21144 21085 21030 20948 21128 20958 20595 20790 20835 13801 13949 14001 20924 21010 20714 20714 20759 20544 20439 20597 20500 12528 12510 13885 20678 20494 20312 20461 20529 20545 20285 20462 20599 12423 12502 13931 20646 20795 20617 20480 20691 20555 20095 20166 20295 12347 12405 13860 20981 20768 20407 20616 20717 20636 20379 20376 20536 12380 13883 14006 20853 20837 20860 20580 20628 20566 20216 20562 20520 12338 13737 14055 13001 12827 12822 12863 12816 12700 12570 12624 12784 12545 13824 14109 13142 13089 13130 13015 13041 12986 12904 12867 12937 14040 14067 +89:19:10 40.0 13972 21094 21129 21130 20990 21198 20923 20628 20724 20884 13824 13915 13997 20834 20798 20901 20608 20723 20536 20469 20554 20553 12588 12552 13946 20578 20620 20448 20427 20517 20503 20363 20562 20711 12464 12615 13847 20819 20872 20687 20627 20661 20476 19998 20213 20281 12283 12462 13933 20919 20826 20470 20653 20728 20709 20367 20308 20508 12339 13771 13912 20816 20967 20727 20579 20790 20562 20357 20650 20641 12304 13783 14008 13006 12868 12938 12846 12749 12740 12610 12567 12775 12512 13951 14070 13127 13146 13062 13093 13067 12951 12941 12962 12902 14009 13967 +89:29:10 40.0 13912 21119 21087 21063 20964 21203 21018 20489 20785 20920 13900 13912 13997 20794 20979 20745 20692 20807 20477 20468 20708 20446 12551 12506 13954 20642 20650 20465 20550 20446 20505 20401 20514 20620 12465 12520 13973 20759 20822 20654 20509 20667 20605 19984 20313 20314 12344 12456 13927 21107 20835 20461 20638 20689 20684 20374 20375 20640 12375 13904 13954 20914 21002 20697 20582 20695 20774 20195 20456 20611 12366 13776 14070 13028 12816 12928 12871 12798 12685 12568 12646 12756 12516 13973 14160 13167 13137 13106 13084 13049 13009 12879 12935 12974 14034 14031 +89:39:10 40.0 14031 21108 21258 21073 20937 21185 21053 20595 20732 20904 13867 13994 13909 20831 21001 20744 20816 20734 20409 20369 20689 20441 12496 12648 14043 20647 20641 20412 20496 20480 20638 20312 20536 20532 12495 12532 13857 20762 20895 20707 20574 20587 20683 20066 20286 20237 12328 12471 13959 21076 20980 20408 20613 20704 20741 20340 20549 20541 12331 13828 13957 20781 20965 20886 20626 20624 20661 20284 20568 20537 12361 13822 14006 13020 13003 12872 12894 12757 12724 12534 12646 12760 12550 13951 14048 13105 13154 13120 13099 13091 13018 12871 12874 13020 14044 14014 +89:49:10 40.0 13901 21207 21120 21081 21071 21169 21081 20571 20664 20815 13900 13990 13947 20827 20934 20804 20710 20820 20482 20431 20526 20531 12488 12515 13962 20586 20687 20484 20490 20518 20613 20353 20550 20654 12457 12501 13946 20704 20934 20664 20599 20619 20581 20096 20261 20254 12329 12471 13962 20823 20985 20269 20546 20760 20711 20353 20485 20651 12396 13789 13996 20889 21006 20701 20507 20683 20626 20169 20506 20602 12339 13757 14117 13085 13012 12803 12850 12808 12793 12561 12639 12774 12584 13900 14137 13189 13148 13139 13066 13052 12963 12890 12859 12903 14041 13999 +89:59:10 40.0 13947 21063 21131 21038 20986 21169 21078 20658 20686 20910 13895 13928 13952 20810 20912 20766 20751 20795 20513 20413 20628 20574 12517 12535 13992 20646 20549 20530 20395 20413 20636 20228 20392 20543 12400 12491 13971 20737 20838 20723 20508 20625 20514 20004 20107 20288 12324 12444 13885 21031 20811 20434 20683 20748 20584 20316 20418 20484 12360 13749 13929 20824 20903 20648 20627 20764 20606 20289 20648 20528 12345 13807 14044 13034 12841 12905 12770 12783 12664 12593 12594 12692 12555 13872 14052 13079 13125 13060 12989 13052 12940 13008 12907 12980 13975 13924 +90:09:10 40.0 13951 21048 21155 21062 20996 21234 21081 20623 20656 20964 13822 13953 13938 20866 20976 20703 20562 20754 20482 20429 20646 20512 12497 12571 14006 20691 20559 20517 20511 20388 20635 20316 20418 20536 12435 12502 13928 20616 20912 20698 20640 20751 20586 20042 20140 20236 12374 12516 13912 20935 20852 20463 20645 20803 20768 20291 20318 20586 12345 13763 13953 20865 21006 20790 20676 20742 20649 20314 20632 20457 12349 13776 14068 12986 12968 12945 12853 12823 12746 12557 12591 12756 12523 13863 14174 13160 13050 13027 13027 13126 13002 12880 12827 13001 14033 13955 +90:19:10 40.0 13944 20966 21092 21066 21039 21275 21007 20560 20763 20887 13809 13935 13977 20854 20918 20643 20702 20715 20500 20444 20606 20485 12602 12522 13910 20582 20645 20485 20503 20474 20453 20356 20558 20619 12485 12483 13904 20705 20881 20645 20513 20520 20587 20076 20243 20216 12342 12459 13994 20995 20830 20396 20639 20660 20702 20414 20425 20614 12370 13785 13963 20819 20822 20789 20599 20618 20703 20344 20478 20572 12303 13838 14052 12939 12877 12859 12846 12754 12748 12605 12583 12710 12530 13958 14147 13150 13064 13145 13149 13032 12923 12903 12845 13026 14002 14027 +90:29:10 40.0 14043 21054 21118 21157 20939 21154 21040 20685 20732 20808 13847 13911 13901 20802 20903 20704 20704 20730 20600 20500 20656 20643 12561 12572 13960 20591 20665 20483 20424 20523 20576 20278 20422 20690 12453 12597 13931 20722 20846 20599 20524 20663 20660 20032 20153 20350 12353 12387 13972 20943 20918 20347 20709 20745 20604 20422 20443 20605 12437 13786 14010 20863 20956 20686 20499 20697 20783 20253 20591 20613 12333 13740 14056 13020 12877 12836 12867 12786 12730 12580 12541 12733 12503 13926 14029 13100 13131 13065 13086 13018 12948 12936 12906 12905 14064 13975 +90:39:10 40.0 13996 20970 21127 20981 20949 21105 20988 20591 20823 20889 13820 13985 13959 20781 20942 20806 20714 20796 20462 20417 20508 20617 12597 12597 13972 20641 20651 20488 20490 20398 20600 20424 20433 20616 12427 12533 13958 20807 20765 20728 20537 20726 20722 20197 20202 20191 12355 12386 13887 20892 20805 20298 20526 20715 20652 20319 20458 20465 12390 13752 13939 20828 20980 20831 20584 20675 20608 20228 20477 20517 12391 13672 13973 13019 12877 12872 12790 12807 12725 12623 12548 12664 12493 13827 14092 13155 13161 13096 13070 13024 12965 12880 12875 12958 13993 14011 +90:49:10 40.0 13931 21048 21174 21054 21102 21180 21040 20750 20713 20874 13830 13840 14035 20779 20851 20752 20669 20693 20428 20428 20542 20434 12586 12537 13930 20558 20585 20478 20450 20500 20584 20318 20411 20545 12440 12474 13872 20750 20836 20654 20410 20683 20605 20012 20146 20251 12365 12395 13903 20951 20759 20472 20541 20617 20664 20387 20501 20589 12411 13781 13902 20913 20925 20800 20636 20600 20650 20220 20576 20593 12311 13858 14017 12995 12842 12924 12768 12811 12693 12555 12567 12765 12522 13853 14131 13120 13066 13122 13074 13096 12900 12876 12884 12948 13977 14053 +90:59:10 40.0 14044 21088 21230 21036 20904 21050 20957 20543 20707 20778 13836 13990 13974 20905 20919 20748 20704 20765 20546 20470 20609 20470 12508 12579 13934 20564 20718 20398 20535 20607 20651 20241 20498 20641 12504 12557 13986 20757 20822 20614 20607 20587 20506 20103 20199 20176 12360 12452 13807 20947 20793 20411 20599 20574 20613 20361 20411 20560 12374 13769 13880 20877 20784 20712 20503 20763 20617 20232 20572 20603 12299 13743 14032 13012 12908 12849 12876 12779 12668 12574 12563 12739 12520 13802 14105 13117 13105 13142 13077 12942 12922 12939 12860 12939 14065 13957 +91:09:10 40.0 14008 21095 21207 21054 21014 21073 21087 20570 20731 20770 13849 13888 13917 20743 20858 20740 20701 20729 20464 20371 20667 20562 12518 12517 13945 20609 20593 20445 20488 20322 20530 20251 20476 20607 12416 12520 13834 20773 20800 20613 20412 20598 20380 20001 20153 20229 12373 12429 13936 20947 20730 20389 20520 20708 20776 20283 20357 20482 12348 13809 13954 20873 20867 20791 20471 20689 20715 20305 20485 20582 12358 13715 13936 13027 12905 12889 12765 12640 12697 12539 12576 12732 12564 13873 14085 13157 13157 13115 13064 13035 12957 12830 12848 13001 14004 13936 +91:19:10 40.0 13928 20958 21114 21058 21011 21119 20889 20606 20724 20812 13824 13889 13871 20703 20956 20779 20641 20689 20441 20383 20524 20494 12525 12517 13976 20670 20537 20438 20496 20474 20484 20335 20507 20536 12422 12531 13988 20781 20743 20610 20538 20611 20515 19960 20186 20084 12355 12420 13825 20973 20715 20302 20596 20675 20589 20230 20408 20485 12298 13857 13993 20836 20880 20713 20475 20648 20561 20262 20497 20561 12370 13684 14022 12947 12859 12836 12814 12844 12657 12514 12518 12732 12398 13857 14109 13070 13067 13031 13027 12942 12888 12965 12830 12925 13977 13992 +91:29:10 40.0 14024 20923 21035 21012 21006 21013 20994 20645 20778 20861 13826 13922 13968 20811 20945 20682 20580 20718 20424 20561 20668 20454 12551 12519 13984 20506 20498 20461 20471 20436 20557 20276 20436 20640 12442 12489 13893 20704 20896 20598 20553 20576 20580 19934 20152 20087 12379 12407 13911 21000 20705 20303 20509 20559 20670 20437 20279 20508 12372 13756 13888 20785 20844 20747 20589 20585 20615 20244 20437 20589 12329 13779 13970 13009 12927 12866 12789 12782 12667 12563 12519 12723 12578 13883 14093 13112 13118 13006 13079 13020 12926 12836 12849 12963 13963 13899 +91:39:10 40.0 13915 21037 21295 21046 21095 21165 20956 20591 20855 20818 13831 13901 13897 20814 20930 20685 20661 20729 20504 20325 20587 20549 12458 12564 13916 20681 20681 20509 20454 20450 20572 20349 20502 20599 12446 12480 13932 20666 20697 20624 20542 20709 20606 20068 20202 20294 12289 12403 13925 20801 20825 20371 20566 20689 20655 20353 20420 20541 12434 13756 13911 20795 20938 20679 20551 20624 20574 20242 20624 20549 12372 13621 13971 13009 12845 12846 12835 12804 12709 12539 12605 12823 12591 13867 14091 13090 13114 13055 13002 13066 12947 12885 12825 12951 14016 13914 +91:49:10 40.0 13962 21078 21203 20933 20927 21095 20963 20625 20735 20771 13832 13890 13934 20890 20898 20765 20674 20753 20547 20479 20568 20487 12550 12555 13937 20512 20662 20378 20405 20490 20537 20306 20386 20564 12538 12468 13845 20883 20957 20658 20525 20588 20689 20005 20196 20218 12222 12397 13867 21004 20838 20436 20628 20743 20741 20285 20431 20527 12359 13799 13935 20759 21003 20822 20655 20637 20655 20281 20474 20605 12373 13810 14004 13073 12927 12855 12736 12898 12661 12554 12621 12671 12561 13900 14168 13139 13088 13108 13036 13058 12943 12890 12883 13000 14032 14014 +91:59:10 40.0 13955 21008 21173 21034 21022 21101 21036 20509 20729 20864 13823 13829 13994 20782 20941 20791 20656 20757 20481 20325 20623 20501 12493 12540 13954 20578 20614 20414 20545 20437 20599 20275 20527 20558 12521 12421 13905 20792 20872 20548 20582 20656 20586 20059 20024 20268 12349 12408 13926 20961 20798 20433 20509 20793 20710 20265 20374 20580 12338 13782 13951 20801 20892 20718 20553 20627 20614 20256 20588 20601 12367 13770 14104 12945 12952 12839 12808 12748 12634 12614 12583 12795 12569 13910 14094 13113 13046 13077 13040 13014 12924 12887 12875 13000 14025 14020 +92:09:10 40.0 13964 21032 21164 20959 20910 20996 20997 20545 20620 20760 13823 13991 13958 20752 20902 20684 20544 20625 20486 20418 20627 20513 12510 12547 13880 20690 20663 20427 20469 20472 20521 20318 20411 20548 12447 12450 13907 20751 20808 20730 20533 20670 20511 20040 20161 20255 12357 12380 13865 20959 20769 20479 20672 20742 20632 20298 20296 20514 12342 13848 13887 20760 20933 20829 20543 20653 20694 20359 20481 20542 12424 13768 14041 13006 12827 12878 12745 12843 12709 12542 12544 12662 12517 13875 14128 13058 13109 13111 13030 13047 12933 12864 12870 12964 14047 13989 +92:19:10 40.0 13917 21010 21126 21002 20937 21086 20946 20530 20638 20934 13833 13863 13994 20909 20957 20704 20597 20667 20532 20420 20615 20531 12555 12506 13978 20631 20589 20389 20494 20409 20533 20316 20417 20701 12425 12454 13830 20611 20857 20716 20551 20493 20601 19924 20179 20276 12370 12426 13871 20932 20909 20473 20509 20618 20702 20304 20363 20520 12370 13752 13957 20947 21004 20810 20584 20654 20642 20233 20556 20588 12319 13734 14016 12957 12875 12846 12783 12797 12606 12599 12626 12736 12568 13862 13960 13166 13101 13012 13054 13001 12870 12903 12861 12954 14015 14002 +92:29:10 40.0 13983 20918 21162 21035 20990 21030 21053 20544 20785 20851 13843 13895 13959 20731 20930 20664 20629 20672 20505 20574 20711 20378 12558 12515 13948 20627 20699 20403 20593 20548 20689 20361 20492 20596 12459 12512 13973 20624 20895 20601 20601 20596 20537 20192 20164 20211 12415 12468 13843 20962 20790 20449 20494 20679 20699 20293 20408 20475 12349 13691 13909 20892 20974 20829 20591 20734 20640 20387 20513 20518 12402 13696 14043 12929 12914 12815 12780 12841 12700 12585 12577 12714 12529 13925 14118 13083 13094 13053 13076 13026 12975 12905 12837 12950 14082 13995 +92:39:10 40.0 14029 21019 21064 21090 20949 21227 21081 20566 20775 20734 13845 13924 13955 20862 20977 20659 20709 20751 20453 20462 20659 20480 12447 12523 13978 20588 20588 20431 20496 20413 20455 20284 20470 20563 12523 12507 13892 20919 20916 20752 20559 20671 20651 20035 20157 20244 12390 12421 13946 21041 20852 20478 20693 20689 20604 20330 20387 20546 12369 13824 13955 20932 20921 20788 20507 20638 20609 20309 20457 20592 12368 13760 14091 13076 12940 12864 12874 12783 12676 12650 12562 12794 12515 13900 14125 13085 13154 13162 13039 13008 12958 12901 12877 12901 14031 14081 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 +0:00:00 + +Max V [Read 2:450,490] + 1 2 3 4 5 6 7 8 9 10 11 12 +A -530.000 -6070.000 -6560.000 -6810.000 -8450.000 64460.000 -7710.000 -7140.000 -7320.000 -9410.000 -360.000 430.000 Max V [Read 2:450,490] +B -460.000 -6140.000 -7640.000 -8060.000 -9250.000 -9480.000 -9080.000 -7790.000 -7800.000 -38980.000 -810.000 630.000 Max V [Read 2:450,490] +C -410.000 -6500.000 -7760.000 -7310.000 -8820.000 -9880.000 -9040.000 -7740.000 -8040.000 -7710.000 -990.000 -740.000 Max V [Read 2:450,490] +D 440.000 -5100.000 -5820.000 -6220.000 -6120.000 -6760.000 -6970.000 -5260.000 -4750.000 -7850.000 -910.000 -1180.000 Max V [Read 2:450,490] +E -500.000 -4560.000 -5560.000 -4720.000 -6200.000 -6200.000 -7210.000 97420.000 -5200.000 -25030.000 -990.000 -420.000 Max V [Read 2:450,490] +F -590.000 -7770.000 -8050.000 -8080.000 -8200.000 -8740.000 -8500.000 -7750.000 -7220.000 -18620.000 -930.000 -370.000 Max V [Read 2:450,490] +G 390.000 -4380.000 -5290.000 -5160.000 -6790.000 -6740.000 -6550.000 -6070.000 -6320.000 -6100.000 -860.000 -420.000 Max V [Read 2:450,490] +H 400.000 -3370.000 -3990.000 8270.000 -5470.000 -5530.000 -5460.000 -4430.000 -4530.000 -5200.000 -410.000 -460.000 Max V [Read 2:450,490] + +R-Squared [Read 2:450,490] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0.831 0.890 0.840 0.799 0.852 0.823 0.791 0.844 0.879 0.756 0.741 0.658 R-Squared [Read 2:450,490] +B 0.672 0.790 0.852 0.907 0.814 0.876 0.891 0.879 0.851 0.828 0.975 0.773 R-Squared [Read 2:450,490] +C 0.786 0.838 0.843 0.803 0.874 0.880 0.874 0.856 0.860 0.885 0.993 0.930 R-Squared [Read 2:450,490] +D 0.719 0.900 0.881 0.912 0.849 0.899 0.915 0.857 0.869 0.752 0.837 0.804 R-Squared [Read 2:450,490] +E 0.836 0.869 0.911 0.857 0.900 0.849 0.924 0.713 0.862 0.787 0.884 0.692 R-Squared [Read 2:450,490] +F 0.891 0.873 0.874 0.877 0.898 0.880 0.941 0.874 0.921 0.743 0.693 0.656 R-Squared [Read 2:450,490] +G 0.939 0.916 0.900 0.817 0.909 0.912 0.875 0.873 0.886 0.893 0.626 0.790 R-Squared [Read 2:450,490] +H 0.693 0.852 0.890 0.536 0.879 0.922 0.905 0.895 0.870 0.867 0.710 0.818 R-Squared [Read 2:450,490] + +t at Max V [Read 2:450,490] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 2:57:31 0:27:31 0:27:31 0:27:31 0:27:31 88:37:31 71:17:31 t at Max V [Read 2:450,490] +B 61:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 88:07:31 t at Max V [Read 2:450,490] +C 51:37:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 t at Max V [Read 2:450,490] +D 6:47:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 3:47:31 0:27:31 0:27:31 t at Max V [Read 2:450,490] +E 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 70:17:31 0:27:31 36:47:31 0:27:31 69:57:31 t at Max V [Read 2:450,490] +F 83:57:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 31:57:31 0:27:31 54:17:31 t at Max V [Read 2:450,490] +G 43:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 19:07:31 t at Max V [Read 2:450,490] +H 79:47:31 0:27:31 0:27:31 81:47:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 0:27:31 85:57:31 0:47:31 t at Max V [Read 2:450,490] + +Lagtime [Read 2:450,490] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0:12:25 ????? ????? ????? ????? 2:49:43 ????? ????? ????? ????? 88:43:38 71:04:58 Lagtime [Read 2:450,490] +B 61:48:49 ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? 89:38:57 Lagtime [Read 2:450,490] +C 51:13:08 ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 2:450,490] +D 7:13:53 ????? ????? ????? ????? ????? ????? ????? ????? 3:11:22 ????? ????? Lagtime [Read 2:450,490] +E ????? ????? ????? ????? ????? ????? ????? 70:07:04 ????? 36:28:38 ????? 69:57:02 Lagtime [Read 2:450,490] +F 84:01:15 ????? ????? ????? ????? ????? ????? ????? ????? 31:26:05 ????? 54:09:57 Lagtime [Read 2:450,490] +G 43:32:39 ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? 18:45:08 Lagtime [Read 2:450,490] +H 79:34:31 ????? ????? 82:02:18 ????? ????? ????? ????? ????? ????? 86:06:47 0:34:02 Lagtime [Read 2:450,490] + +Max V [Read 3:295,350] + 1 2 3 4 5 6 7 8 9 10 11 12 +A -25710.000 -60510.000 -60820.000 -63280.000 -63470.000 -63730.000 -66390.000 -61700.000 -64550.000 -61560.000 -27510.000 -22650.000 Max V [Read 3:295,350] +B -24220.000 -63770.000 -65930.000 -70240.000 -69320.000 -73430.000 -70330.000 -61190.000 -72260.000 -65830.000 -27880.000 -27900.000 Max V [Read 3:295,350] +C -21780.000 -65110.000 -70310.000 -70310.000 -72750.000 -70500.000 -70410.000 -64970.000 -67250.000 -68110.000 -27410.000 -27220.000 Max V [Read 3:295,350] +D -24100.000 -70650.000 -78580.000 -77710.000 -80740.000 -82030.000 -80290.000 -79810.000 -75820.000 -75400.000 -26920.000 -25590.000 Max V [Read 3:295,350] +E -25270.000 -73380.000 -81160.000 -80500.000 -83090.000 -80520.000 -84710.000 -82730.000 -83770.000 -78970.000 -29400.000 -26170.000 Max V [Read 3:295,350] +F -25460.000 -72980.000 -78250.000 -80160.000 -79340.000 -80540.000 -85190.000 -81060.000 -78530.000 -78390.000 -26740.000 -22760.000 Max V [Read 3:295,350] +G -23210.000 -25010.000 -30070.000 -30520.000 -27750.000 -29870.000 -29320.000 -30260.000 -28650.000 -26870.000 -26540.000 -22620.000 Max V [Read 3:295,350] +H -25250.000 -24170.000 -27470.000 -28160.000 -27300.000 -31740.000 -26900.000 -27180.000 -25430.000 -23920.000 -23350.000 -23410.000 Max V [Read 3:295,350] + +R-Squared [Read 3:295,350] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0.975 0.924 0.923 0.942 0.932 0.917 0.948 0.928 0.907 0.945 0.932 0.963 R-Squared [Read 3:295,350] +B 0.920 0.940 0.907 0.930 0.921 0.929 0.948 0.877 0.934 0.933 0.975 0.911 R-Squared [Read 3:295,350] +C 0.890 0.912 0.930 0.917 0.945 0.929 0.939 0.929 0.916 0.895 0.939 0.965 R-Squared [Read 3:295,350] +D 0.960 0.899 0.931 0.952 0.904 0.937 0.912 0.899 0.944 0.947 0.951 0.886 R-Squared [Read 3:295,350] +E 0.949 0.921 0.903 0.934 0.933 0.948 0.917 0.945 0.933 0.900 0.934 0.920 R-Squared [Read 3:295,350] +F 0.946 0.944 0.904 0.922 0.938 0.957 0.926 0.929 0.927 0.953 0.927 0.936 R-Squared [Read 3:295,350] +G 0.977 0.913 0.910 0.937 0.893 0.964 0.905 0.950 0.947 0.963 0.932 0.968 R-Squared [Read 3:295,350] +H 0.972 0.930 0.943 0.957 0.940 0.947 0.927 0.959 0.958 0.946 0.948 0.949 R-Squared [Read 3:295,350] + +t at Max V [Read 3:295,350] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +B 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +C 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +D 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +E 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +F 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +G 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] +H 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 0:28:20 t at Max V [Read 3:295,350] + +Lagtime [Read 3:295,350] + 1 2 3 4 5 6 7 8 9 10 11 12 +A ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +B ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +C ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +D ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +E ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +F ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +G ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] +H ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,350] + +Max V [Read 3:295,335] + 1 2 3 4 5 6 7 8 9 10 11 12 +A -31200.000 -65430.000 -69090.000 -71220.000 -70990.000 -71030.000 -68400.000 -69800.000 -67980.000 -65420.000 -30810.000 -31700.000 Max V [Read 3:295,335] +B -32350.000 -66290.000 -79600.000 -77560.000 -74550.000 -78770.000 -73930.000 -77160.000 -76250.000 -73790.000 -34930.000 -29560.000 Max V [Read 3:295,335] +C -32660.000 -68920.000 -79300.000 -81310.000 -73780.000 -78440.000 -76920.000 -80320.000 -76520.000 -73580.000 -35030.000 -32580.000 Max V [Read 3:295,335] +D -34310.000 -74590.000 -78310.000 -86780.000 -83720.000 -91910.000 -82450.000 -84010.000 -82990.000 -78170.000 -32780.000 -29420.000 Max V [Read 3:295,335] +E -29250.000 -74440.000 -85760.000 -84750.000 -87880.000 -84570.000 -87040.000 -86840.000 -85620.000 -84310.000 -35320.000 -31970.000 Max V [Read 3:295,335] +F -30690.000 -73740.000 -84820.000 -87200.000 -86500.000 -84840.000 -82950.000 -82510.000 -81300.000 -82620.000 -35790.000 -29210.000 Max V [Read 3:295,335] +G -34560.000 -34640.000 -39280.000 -42830.000 -41260.000 -39590.000 -38150.000 -34600.000 -38520.000 -34130.000 -32910.000 -29590.000 Max V [Read 3:295,335] +H -32140.000 -31870.000 -35420.000 -37460.000 -36630.000 -36000.000 -38710.000 -39430.000 -36410.000 -33770.000 -30420.000 -27370.000 Max V [Read 3:295,335] + +R-Squared [Read 3:295,335] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0.966 0.937 0.949 0.932 0.926 0.904 0.927 0.933 0.918 0.916 0.969 0.942 R-Squared [Read 3:295,335] +B 0.960 0.909 0.922 0.934 0.912 0.941 0.914 0.929 0.903 0.931 0.957 0.930 R-Squared [Read 3:295,335] +C 0.982 0.896 0.908 0.934 0.927 0.927 0.921 0.942 0.933 0.925 0.952 0.917 R-Squared [Read 3:295,335] +D 0.975 0.933 0.912 0.932 0.931 0.941 0.946 0.938 0.925 0.914 0.950 0.928 R-Squared [Read 3:295,335] +E 0.951 0.948 0.929 0.938 0.921 0.924 0.940 0.952 0.909 0.939 0.965 0.954 R-Squared [Read 3:295,335] +F 0.934 0.948 0.944 0.915 0.930 0.944 0.938 0.924 0.931 0.920 0.943 0.927 R-Squared [Read 3:295,335] +G 0.948 0.920 0.980 0.937 0.936 0.954 0.955 0.937 0.907 0.918 0.944 0.956 R-Squared [Read 3:295,335] +H 0.961 0.927 0.957 0.949 0.939 0.968 0.964 0.929 0.939 0.926 0.953 0.958 R-Squared [Read 3:295,335] + +t at Max V [Read 3:295,335] + 1 2 3 4 5 6 7 8 9 10 11 12 +A 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +B 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +C 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +D 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +E 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +F 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +G 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] +H 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 0:29:10 t at Max V [Read 3:295,335] + +Lagtime [Read 3:295,335] + 1 2 3 4 5 6 7 8 9 10 11 12 +A ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +B ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +C ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +D ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +E ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +F ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +G ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] +H ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? ????? Lagtime [Read 3:295,335] + From 2e77f8507660e5cfb4484319984fbc1d69c07745 Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Thu, 11 Dec 2025 14:21:45 -0500 Subject: [PATCH 2/7] Fix lint --- .../agilent_gen5/agilent_gen5_parser.py | 47 +- .../agilent_gen5/agilent_gen5_reader.py | 50 +- .../agilent_gen5/agilent_gen5_structure.py | 39 +- ...file (Fibrillation data) - TXT format.json | 45827 +++++++++++++++- .../kinetic_helper_gene_growth_curve.json | 2 +- .../multi_read_modes/multiple_read_modes.json | 2 +- .../multi_read_modes/two_same_read_modes.json | 2 +- 7 files changed, 43630 insertions(+), 2339 deletions(-) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py index 42d13da80..df9e07524 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py @@ -42,9 +42,9 @@ def merge_measurement_groups( well_pos = group.measurements[0].location_identifier groups_by_well[well_pos].append(group) - # Merge measurements for each well in sorted order for consistency + # Merge measurements for each well merged_groups = [] - for well_pos in sorted(groups_by_well.keys()): + for well_pos in groups_by_well.keys(): groups = groups_by_well[well_pos] # Take metadata from the first group base_group = groups[0] @@ -78,6 +78,9 @@ def create_data(self, named_file_contents: NamedFileContents) -> Data: all_measurement_groups: list[list[MeasurementGroup]] = [] all_calculated_data: list[CalculatedDocument] = [] + # Track which reads use the combined results section to avoid processing it multiple times + combined_results_read_indices: list[int] = [] + for read_index, read_data in enumerate(context.read_data, start=1): # Create a test sub-context to check if this is kinetic test_context = reader.create_read_context(context, read_data, read_index) @@ -87,7 +90,9 @@ def create_data(self, named_file_contents: NamedFileContents) -> Data: # Split kinetic read into separate sub-reads per filter set # Each label gets its own Time section processed separately # Sort labels consistently to ensure stable output - sorted_labels = sorted(read_data.measurement_labels, key=lambda x: (len(x), x)) + sorted_labels = sorted( + read_data.measurement_labels, key=lambda x: (len(x), x) + ) for label in sorted_labels: sub_context = reader.create_read_context( context, read_data, read_index, specific_label=label @@ -97,12 +102,36 @@ def create_data(self, named_file_contents: NamedFileContents) -> Data: all_measurement_groups.append(measurement_groups) all_calculated_data.extend(calculated_data) else: - # Process the read as a whole (either endpoint, or kinetic with single label) - sub_context = test_context - processor = get_processor(sub_context) - measurement_groups, calculated_data = processor.process(sub_context) - all_measurement_groups.append(measurement_groups) - all_calculated_data.extend(calculated_data) + # Check if this read uses the combined results section + uses_combined_results = ( + not test_context.has_kinetic_measurements + and test_context.results_section + and reader.get_results_section() == test_context.results_section + ) + + if uses_combined_results: + # Track this read for combined processing + combined_results_read_indices.append(read_index) + else: + # Process the read independently + sub_context = test_context + processor = get_processor(sub_context) + measurement_groups, calculated_data = processor.process(sub_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) + + # Process all reads that use the combined results section together (only once) + if combined_results_read_indices: + # Use the first read's context but with all read_data included + first_read_index = combined_results_read_indices[0] + first_read_data = context.read_data[first_read_index - 1] + combined_context = reader.create_read_context( + context, first_read_data, first_read_index + ) + processor = get_processor(combined_context) + measurement_groups, calculated_data = processor.process(combined_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) # Merge measurement groups by well position merged_groups = merge_measurement_groups(all_measurement_groups) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py index 30513a1c1..1bce1e254 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py @@ -69,7 +69,8 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: self.sections["Procedure Details"] = list(plate_reader.pop_until_empty()) plate_reader.drop_empty() - # Track the last read label for associating with Time sections + # Track the last section name for associating with Time sections + last_section_name: str | None = None last_read_label: str | None = None while plate_reader.current_line_exists(): @@ -87,12 +88,22 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: last_read_label = section_name continue - # If this is a Time section and we have a read label, store it with the read label - if section_name == "Time" and last_read_label: - self.time_sections[last_read_label] = lines - last_read_label = None + # If this is a Time section, associate it with a read label if we have one + if section_name == "Time": + if last_read_label: + # Format: "Read X:label" -> Time section + self.time_sections[last_read_label] = lines + last_read_label = None + elif last_section_name: + # Format: "{label}" section followed by Time section + # Store with just the label as key for kinetic files + self.time_sections[last_section_name] = lines + else: + # Standalone Time section (shouldn't happen, but store it anyway) + self.sections[section_name] = lines else: self.sections[section_name] = lines + last_section_name = section_name plate_reader.drop_empty() @@ -223,10 +234,19 @@ def create_read_context( # Check if any labels have Time sections (indicating kinetic data) for label in labels_to_process: + # Try both "Read X:label" format and plain label format time_key = f"Read {read_index}:{label}" + label_only_key = label + + time_section_lines = None if time_key in self.time_sections: + time_section_lines = self.time_sections[time_key] + elif label_only_key in self.time_sections: + time_section_lines = self.time_sections[label_only_key] + + if time_section_lines: has_time_section = True - kinetic_result = get_kinetic_measurements(self.time_sections[time_key]) + kinetic_result = get_kinetic_measurements(time_section_lines) if kinetic_result: km, ket, ke = kinetic_result # For the first label found, use its kinetic data @@ -241,15 +261,23 @@ def create_read_context( has_results_section = True # Based on what sections exist, get the appropriate data + uses_combined_results = False if has_time_section: # This is a kinetic read - we already loaded the kinetic data above - pass + # But check for a Results section which may contain calculated data + if not has_results_section: + results_section = self.get_results_section() or [] + else: + results_section = self._get_results_for_read( + read_index, labels_to_process + ) elif has_results_section: # This is an endpoint read - get the results section results_section = self._get_results_for_read(read_index, labels_to_process) else: # Fallback - check the combined results section results_section = self.get_results_section() or [] + uses_combined_results = bool(results_section) # If specific_label was provided, create a modified ReadData with only that label if specific_label: @@ -257,9 +285,15 @@ def create_read_context( read_data = replace(read_data, measurement_labels={specific_label}) + # If using combined results section, include all read_data so all measurement labels are known + # Otherwise, use just the single read_data for this sub-context + context_read_data = ( + base_context.read_data if uses_combined_results else [read_data] + ) + return Gen5DataContext( header_data=base_context.header_data, - read_data=[read_data], # Single ReadData for this sub-context + read_data=context_read_data, kinetic_data=base_context.kinetic_data if has_time_section else None, results_section=results_section, sample_identifiers=base_context.sample_identifiers, diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py index 6e4a2fbb8..7d35949ea 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py @@ -50,6 +50,7 @@ MEASUREMENTS_DATA_POINT_KEY, MIRROR_KEY, NAN_EMISSION_EXCITATION, + NO_MEASUREMENTS_ERROR, OPTICS_KEY, PATHLENGTH_CORRECTION_KEY, READ_DATA_MEASUREMENT_ERROR, @@ -814,6 +815,13 @@ def get_kinetic_measurements( error_documents: dict[str, list[ErrorDocument]] = {} for col_name, column in data.items(): + # Skip temperature columns (e.g., "T∞ 600" or "T° 600") + col_name_str = str(col_name) + if col_name_str.startswith("T") and any( + char in col_name_str for char in ["∞", "°", "\u221e", "\u00b0"] + ): + continue + well_values: list[float | None] = [] for idx, value in enumerate(column): # Handle empty values @@ -885,6 +893,9 @@ def create_results( actual_temperature: float | None, concentration_values: dict[str, float | None] | None = None, ) -> tuple[list[MeasurementGroup], list[CalculatedDocument]]: + if not result_lines: + raise AllotropeConversionError(NO_MEASUREMENTS_ERROR) + if result_lines[0].strip() != "Results": msg = f"Expected the first line of the results section '{result_lines[0]}' to be 'Results'." raise AllotropeConversionError(msg) @@ -958,11 +969,11 @@ def create_results( for measurement in measurements ], ) - for well_position, measurements in sorted(well_to_measurements.items()) + for well_position, measurements in well_to_measurements.items() ] calculated_data_items = [] - for well_position, well_calculated_data in sorted(calculated_data.items()): + for well_position, well_calculated_data in calculated_data.items(): if well_position not in well_to_measurements: continue # Skip wells without measurements for label, value in well_calculated_data: @@ -1033,12 +1044,25 @@ def create_kinetic_results( calculated_data[well_pos].append((label, well_value)) # Get all well positions from kinetic measurements (primary) or calculated data - well_positions = set(kinetic_measurements.keys()) | set(calculated_data.keys()) + # Preserve order from kinetic_measurements, then add any wells only in calculated_data + well_positions = list(kinetic_measurements.keys()) + for well_pos in calculated_data.keys(): + if well_pos not in well_positions: + well_positions.append(well_pos) + + # Determine plate_well_count from data if header value is not reliable + # For kinetic data, if header has a valid plate count, use it + # Otherwise count wells from the actual data + if header_data.plate_well_count and header_data.plate_well_count > 1: + plate_well_count = int(header_data.plate_well_count) + else: + # Fallback: count wells from the data + plate_well_count = len(well_positions) groups = [ MeasurementGroup( measurement_time=header_data.datetime, - plate_well_count=header_data.plate_well_count, + plate_well_count=plate_well_count, measurements=[ _create_measurement( measurement := MeasurementData( @@ -1059,7 +1083,7 @@ def create_kinetic_results( ) ], ) - for well_position in sorted(well_positions) + for well_position in well_positions ] groups_by_well_position = { @@ -1084,8 +1108,9 @@ def create_kinetic_results( name=label, value=value, ) - for well_position, well_calculated_data in sorted(calculated_data.items()) - if well_position in groups_by_well_position # Only create for wells with measurements + for well_position, well_calculated_data in calculated_data.items() + if well_position + in groups_by_well_position # Only create for wells with measurements for label, value in well_calculated_data ] diff --git a/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json b/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json index 38232cee7..d97d2ecdf 100644 --- a/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json +++ b/tests/parsers/agilent_gen5/testdata/Synergy instrument datafile (Fibrillation data) - TXT format.json @@ -261,7 +261,7 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_385", + "measurement identifier": "AGILENT_GEN5_TEST_ID_1248", "sample document": { "location identifier": "A1", "sample identifier": "SPL1", @@ -340,7 +340,7 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_482", + "measurement identifier": "AGILENT_GEN5_TEST_ID_2208", "sample document": { "location identifier": "A1", "sample identifier": "SPL1", @@ -420,10 +420,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_9", + "measurement identifier": "AGILENT_GEN5_TEST_ID_1", "sample document": { - "location identifier": "A10", - "sample identifier": "SPL73", + "location identifier": "A2", + "sample identifier": "SPL9", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -433,7 +433,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28929.0, + "value": 28863.0, "unit": "RFU" } }, @@ -465,10 +465,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_21", + "measurement identifier": "AGILENT_GEN5_TEST_ID_13", "sample document": { - "location identifier": "A10", - "sample identifier": "SPL73", + "location identifier": "A2", + "sample identifier": "SPL9", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -478,7 +478,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29609.0, + "value": 29472.0, "unit": "RFU" } }, @@ -510,10 +510,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_33", + "measurement identifier": "AGILENT_GEN5_TEST_ID_25", "sample document": { - "location identifier": "A10", - "sample identifier": "SPL73", + "location identifier": "A2", + "sample identifier": "SPL9", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -523,7 +523,7 @@ "unit": "degC" }, "fluorescence": { - "value": 2075.0, + "value": 1636.0, "unit": "RFU" } }, @@ -568,8 +568,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_289", "sample document": { - "location identifier": 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continious agitation 40 C.prt", @@ -1201,7 +1201,7 @@ "unit": "degC" }, "fluorescence": { - "value": 18335.0, + "value": 28995.0, "unit": "RFU" } }, @@ -1233,10 +1233,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_23", + "measurement identifier": "AGILENT_GEN5_TEST_ID_15", "sample document": { - "location identifier": "A12", - "sample identifier": "SPL89", + "location identifier": "A4", + "sample identifier": "SPL25", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -1246,7 +1246,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17444.0, + "value": 29462.0, "unit": "RFU" } }, @@ -1278,10 +1278,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_35", + "measurement identifier": "AGILENT_GEN5_TEST_ID_27", "sample document": { - "location identifier": "A12", - "sample identifier": "SPL89", + "location identifier": "A4", + "sample 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21985.0] ] } } @@ -1956,10 +1956,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_2", + "measurement identifier": "AGILENT_GEN5_TEST_ID_5", "sample document": { - "location identifier": "A3", - "sample identifier": "SPL17", + "location identifier": "A6", + "sample identifier": "SPL41", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -1969,7 +1969,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28918.0, + "value": 29174.0, "unit": "RFU" } }, @@ -2001,10 +2001,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_14", + "measurement identifier": "AGILENT_GEN5_TEST_ID_17", "sample document": { - "location identifier": "A3", - "sample identifier": "SPL17", + "location identifier": "A6", + "sample identifier": "SPL41", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2014,7 +2014,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29571.0, + "value": 29799.0, "unit": "RFU" } }, @@ -2046,10 +2046,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_26", + "measurement identifier": "AGILENT_GEN5_TEST_ID_29", "sample document": { - "location identifier": "A3", - "sample identifier": "SPL17", + "location identifier": "A6", + "sample identifier": "SPL41", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2059,7 +2059,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1678.0, + "value": 1933.0, "unit": "RFU" } }, @@ -2104,8 +2104,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_293", "sample document": { - "location identifier": "A3", - "sample identifier": "SPL17", + "location identifier": "A6", + "sample identifier": "SPL41", "well plate identifier": "Plate 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identifier": "SPL49", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2353,7 +2353,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28995.0, + "value": 29068.0, "unit": "RFU" } }, @@ -2385,10 +2385,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_15", + "measurement identifier": "AGILENT_GEN5_TEST_ID_18", "sample document": { - "location identifier": "A4", - "sample identifier": "SPL25", + "location identifier": "A7", + "sample identifier": "SPL49", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2398,7 +2398,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29462.0, + "value": 29681.0, "unit": "RFU" } }, @@ -2430,10 +2430,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_27", + "measurement identifier": 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identifier": "AGILENT_GEN5_TEST_ID_4", + "measurement identifier": "AGILENT_GEN5_TEST_ID_7", "sample document": { - "location identifier": "A5", - "sample identifier": "SPL33", + "location identifier": "A8", + "sample identifier": "SPL57", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2737,7 +2737,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29097.0, + "value": 28674.0, "unit": "RFU" } }, @@ -2769,10 +2769,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_16", + "measurement identifier": "AGILENT_GEN5_TEST_ID_19", "sample document": { - "location identifier": "A5", - "sample identifier": "SPL33", + "location identifier": "A8", + "sample identifier": "SPL57", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2782,7 +2782,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29540.0, + "value": 29088.0, "unit": "RFU" } }, @@ -2814,10 +2814,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_28", + "measurement identifier": "AGILENT_GEN5_TEST_ID_31", "sample document": { - "location identifier": "A5", - "sample identifier": "SPL33", + "location identifier": "A8", + "sample identifier": "SPL57", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -2827,7 +2827,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1895.0, + "value": 1812.0, "unit": "RFU" } }, @@ -2872,8 +2872,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_295", "sample document": { - "location identifier": "A5", - "sample identifier": "SPL33", + "location identifier": "A8", + "sample identifier": "SPL57", "well plate identifier": "Plate 1" }, "analytical method identifier": 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"unit": "degC" }, "fluorescence": { - "value": 29681.0, + "value": 29609.0, "unit": "RFU" } }, @@ -3582,10 +3582,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_30", + "measurement identifier": "AGILENT_GEN5_TEST_ID_33", "sample document": { - "location identifier": "A7", - "sample identifier": "SPL49", + "location identifier": "A10", + "sample identifier": "SPL73", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -3595,7 +3595,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1940.0, + "value": 2075.0, "unit": "RFU" } }, @@ -3640,8 +3640,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_297", "sample document": { - "location identifier": "A7", - "sample identifier": "SPL49", + "location identifier": "A10", + "sample identifier": "SPL73", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical 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"measurement identifier": "AGILENT_GEN5_TEST_ID_2220", "sample document": { "location identifier": "B1", "sample identifier": "SPL2", @@ -5028,10 +5028,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_45", + "measurement identifier": "AGILENT_GEN5_TEST_ID_37", "sample document": { - "location identifier": "B10", - "sample identifier": "SPL74", + "location identifier": "B2", + "sample identifier": "SPL10", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -5041,7 +5041,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28653.0, + "value": 28858.0, "unit": "RFU" } }, @@ -5073,10 +5073,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_57", + "measurement identifier": "AGILENT_GEN5_TEST_ID_49", "sample document": { - "location identifier": "B10", - "sample identifier": "SPL74", + "location identifier": "B2", + "sample identifier": "SPL10", 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identifier": "AGILENT_GEN5_TEST_ID_58", + "measurement identifier": "AGILENT_GEN5_TEST_ID_50", "sample document": { - "location identifier": "B11", - "sample identifier": "SPL82", + "location identifier": "B3", + "sample identifier": "SPL18", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -5470,7 +5470,7 @@ "unit": "degC" }, "fluorescence": { - "value": 15745.0, + "value": 29509.0, "unit": "RFU" } }, @@ -5502,10 +5502,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_70", + "measurement identifier": "AGILENT_GEN5_TEST_ID_62", "sample document": { - "location identifier": "B11", - "sample identifier": "SPL82", + "location identifier": "B3", + "sample identifier": "SPL18", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ 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}, - "measurement identifier": "AGILENT_GEN5_TEST_ID_506", + "measurement identifier": "AGILENT_GEN5_TEST_ID_2232", "sample document": { "location identifier": "C1", "sample identifier": "SPL3", @@ -9636,10 +9636,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_81", + "measurement identifier": "AGILENT_GEN5_TEST_ID_73", "sample document": { - "location identifier": "C10", - "sample identifier": "SPL75", + "location identifier": "C2", + "sample identifier": "SPL11", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -9649,7 +9649,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28658.0, + "value": 28424.0, "unit": "RFU" } }, @@ -9681,10 +9681,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_93", + "measurement identifier": "AGILENT_GEN5_TEST_ID_85", "sample document": { - "location identifier": "C10", - "sample identifier": "SPL75", + 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document": { - "location identifier": "C9", - "sample identifier": "SPL67", + "location identifier": "C12", + "sample identifier": "SPL91", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -13489,7 +13489,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28454.0, + "value": 16701.0, "unit": "RFU" } }, @@ -13521,10 +13521,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_92", + "measurement identifier": "AGILENT_GEN5_TEST_ID_95", "sample document": { - "location identifier": "C9", - "sample identifier": "SPL67", + "location identifier": "C12", + "sample identifier": "SPL91", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -13534,7 +13534,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29043.0, + "value": 15687.0, "unit": 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continious agitation 40 C.prt", @@ -14257,7 +14257,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28862.0, + "value": 29134.0, "unit": "RFU" } }, @@ -14289,10 +14289,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_129", + "measurement identifier": "AGILENT_GEN5_TEST_ID_121", "sample document": { - "location identifier": "D10", - "sample identifier": "SPL76", + "location identifier": "D2", + "sample identifier": "SPL12", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -14302,7 +14302,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29990.0, + "value": 30239.0, "unit": "RFU" } }, @@ -14334,10 +14334,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_141", + "measurement identifier": "AGILENT_GEN5_TEST_ID_133", "sample document": { - "location identifier": "D10", - "sample identifier": "SPL76", + "location identifier": "D2", + 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document": { - "location identifier": "D11", - "sample identifier": "SPL84", + "location identifier": "D3", + "sample identifier": "SPL20", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -14641,7 +14641,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16621.0, + "value": 29303.0, "unit": "RFU" } }, @@ -14673,10 +14673,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_130", + "measurement identifier": "AGILENT_GEN5_TEST_ID_122", "sample document": { - "location identifier": "D11", - "sample identifier": "SPL84", + "location identifier": "D3", + "sample identifier": "SPL20", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -14686,7 +14686,7 @@ "unit": "degC" }, "fluorescence": { - "value": 15388.0, + "value": 30178.0, "unit": "RFU" } }, @@ -14718,10 +14718,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_142", + "measurement identifier": "AGILENT_GEN5_TEST_ID_134", "sample document": { - "location identifier": "D11", - "sample identifier": "SPL84", + "location identifier": "D3", + "sample identifier": "SPL20", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -14731,7 +14731,7 @@ "unit": "degC" }, "fluorescence": { - "value": 528.0, + "value": 1234.0, "unit": "RFU" } }, @@ -14776,8 +14776,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_326", "sample document": { - "location identifier": "D11", - "sample identifier": "SPL84", + "location identifier": "D3", + "sample identifier": "SPL20", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", 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identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -15070,7 +15070,7 @@ "unit": "degC" }, "fluorescence": { - "value": 15607.0, + "value": 30174.0, "unit": "RFU" } }, @@ -15102,10 +15102,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_143", + "measurement identifier": "AGILENT_GEN5_TEST_ID_135", "sample document": { - "location identifier": "D12", - "sample identifier": "SPL92", + "location identifier": "D4", + "sample identifier": "SPL28", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -15115,7 +15115,7 @@ "unit": "degC" }, "fluorescence": { - "value": 565.0, + "value": 1239.0, "unit": "RFU" } }, @@ -15160,8 +15160,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_327", "sample document": { - "location identifier": "D12", - 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identifier": "AGILENT_GEN5_TEST_ID_121", + "measurement identifier": "AGILENT_GEN5_TEST_ID_124", "sample document": { - "location identifier": "D2", - "sample identifier": "SPL12", + "location identifier": "D5", + "sample identifier": "SPL36", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -15454,7 +15454,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30239.0, + "value": 29950.0, "unit": "RFU" } }, @@ -15486,10 +15486,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_133", + "measurement identifier": "AGILENT_GEN5_TEST_ID_136", "sample document": { - "location identifier": "D2", - "sample identifier": "SPL12", + "location identifier": "D5", + "sample identifier": "SPL36", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ 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"AGILENT_GEN5_TEST_ID_153", + "measurement identifier": "AGILENT_GEN5_TEST_ID_145", "sample document": { - "location identifier": "E10", - "sample identifier": "SPL77", + "location identifier": "E2", + "sample identifier": "SPL13", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -18865,7 +18865,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29200.0, + "value": 29414.0, "unit": "RFU" } }, @@ -18897,10 +18897,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_165", + "measurement identifier": "AGILENT_GEN5_TEST_ID_157", "sample document": { - "location identifier": "E10", - "sample identifier": "SPL77", + "location identifier": "E2", + "sample identifier": "SPL13", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -18910,7 +18910,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30321.0, + "value": 30593.0, "unit": "RFU" } }, @@ -18942,10 +18942,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_177", + "measurement identifier": "AGILENT_GEN5_TEST_ID_169", "sample document": { - "location identifier": "E10", - "sample identifier": "SPL77", + "location identifier": "E2", + "sample identifier": "SPL13", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -18955,7 +18955,7 @@ "unit": "degC" }, "fluorescence": { - "value": 2589.0, + "value": 1207.0, "unit": "RFU" } }, @@ -19000,8 +19000,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_337", "sample document": { - "location identifier": "E10", - "sample identifier": "SPL77", + "location identifier": "E2", + "sample identifier": "SPL13", "well plate identifier": "Plate 1" }, "analytical method identifier": 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continious agitation 40 C.prt", @@ -20401,7 +20401,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29343.0, + "value": 29318.0, "unit": "RFU" } }, @@ -20433,10 +20433,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_158", + "measurement identifier": "AGILENT_GEN5_TEST_ID_161", "sample document": { - "location identifier": "E3", - "sample identifier": "SPL21", + "location identifier": "E6", + "sample identifier": "SPL45", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -20446,7 +20446,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30525.0, + "value": 30300.0, "unit": "RFU" } }, @@ -20478,10 +20478,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_170", + "measurement identifier": "AGILENT_GEN5_TEST_ID_173", "sample document": { - "location identifier": "E3", - "sample identifier": "SPL21", + "location identifier": "E6", + 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"location identifier": "E4", - "sample identifier": "SPL29", + "location identifier": "E7", + "sample identifier": "SPL53", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -20785,7 +20785,7 @@ "unit": "degC" }, "fluorescence": { - "value": 28855.0, + "value": 29229.0, "unit": "RFU" } }, @@ -20817,10 +20817,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_159", + "measurement identifier": "AGILENT_GEN5_TEST_ID_162", "sample document": { - "location identifier": "E4", - "sample identifier": "SPL29", + "location identifier": "E7", + "sample identifier": "SPL53", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -20830,7 +20830,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29891.0, + "value": 30221.0, "unit": "RFU" } }, @@ -20862,10 +20862,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_171", + "measurement identifier": "AGILENT_GEN5_TEST_ID_174", "sample document": { - "location identifier": "E4", - "sample identifier": "SPL29", + "location identifier": "E7", + "sample identifier": "SPL53", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -20875,7 +20875,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1156.0, + "value": 1386.0, "unit": "RFU" } }, @@ -20920,8 +20920,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_342", "sample document": { - "location identifier": "E4", - "sample identifier": "SPL29", + "location identifier": "E7", + "sample identifier": "SPL53", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -20953,7 +20953,7 @@ 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identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -21214,7 +21214,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30071.0, + "value": 30183.0, "unit": "RFU" } }, @@ -21246,10 +21246,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_172", + "measurement identifier": "AGILENT_GEN5_TEST_ID_175", "sample document": { - "location identifier": "E5", - "sample identifier": "SPL37", + "location identifier": "E8", + "sample identifier": "SPL61", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -21259,7 +21259,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1319.0, + "value": 1174.0, "unit": "RFU" } }, @@ -21304,8 +21304,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_343", "sample document": { - "location identifier": "E5", - "sample identifier": "SPL37", + "location 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continious agitation 40 C.prt", @@ -21553,7 +21553,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29318.0, + "value": 29026.0, "unit": "RFU" } }, @@ -21585,10 +21585,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_161", + "measurement identifier": "AGILENT_GEN5_TEST_ID_164", "sample document": { - "location identifier": "E6", - "sample identifier": "SPL45", + "location identifier": "E9", + "sample identifier": "SPL69", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -21598,7 +21598,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30300.0, + "value": 30288.0, "unit": "RFU" } }, @@ -21630,10 +21630,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_173", + "measurement identifier": "AGILENT_GEN5_TEST_ID_176", "sample document": { - "location identifier": "E6", - "sample identifier": "SPL45", + "location identifier": "E9", + 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"location identifier": "E7", - "sample identifier": "SPL53", + "location identifier": "E10", + "sample identifier": "SPL77", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -21937,7 +21937,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29229.0, + "value": 29200.0, "unit": "RFU" } }, @@ -21969,10 +21969,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_162", + "measurement identifier": "AGILENT_GEN5_TEST_ID_165", "sample document": { - "location identifier": "E7", - "sample identifier": "SPL53", + "location identifier": "E10", + "sample identifier": "SPL77", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -21982,7 +21982,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30221.0, + "value": 30321.0, "unit": "RFU" } }, @@ -22014,10 +22014,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_174", + "measurement identifier": "AGILENT_GEN5_TEST_ID_177", "sample document": { - "location identifier": "E7", - "sample identifier": "SPL53", + "location identifier": "E10", + "sample identifier": "SPL77", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -22027,7 +22027,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1386.0, + "value": 2589.0, "unit": "RFU" } }, @@ -22072,8 +22072,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_345", "sample document": { - "location identifier": "E7", - "sample identifier": "SPL53", + "location identifier": "E10", + "sample identifier": "SPL77", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -22105,7 +22105,7 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"analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -22321,7 +22321,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29129.0, + "value": 16683.0, "unit": "RFU" } }, @@ -22353,10 +22353,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_163", + "measurement identifier": "AGILENT_GEN5_TEST_ID_166", "sample document": { - "location identifier": "E8", - "sample identifier": "SPL61", + "location identifier": "E11", + "sample identifier": "SPL85", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -22366,7 +22366,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30183.0, + "value": 15449.0, "unit": "RFU" } }, @@ -22398,10 +22398,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_175", + "measurement identifier": "AGILENT_GEN5_TEST_ID_178", "sample document": { 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identifier": "AGILENT_GEN5_TEST_ID_198", "sample document": { - "location identifier": "F4", - "sample identifier": "SPL30", + "location identifier": "F7", + "sample identifier": "SPL54", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -25438,7 +25438,7 @@ "unit": "degC" }, "fluorescence": { - "value": 30372.0, + "value": 30083.0, "unit": "RFU" } }, @@ -25470,10 +25470,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_207", + "measurement identifier": "AGILENT_GEN5_TEST_ID_210", "sample document": { - "location identifier": "F4", - "sample identifier": "SPL30", + "location identifier": "F7", + "sample identifier": "SPL54", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -25483,7 +25483,7 @@ "unit": "degC" }, "fluorescence": { 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Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -25777,7 +25777,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29075.0, + "value": 29152.0, "unit": "RFU" } }, @@ -25809,10 +25809,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_196", + "measurement identifier": "AGILENT_GEN5_TEST_ID_199", "sample document": { - "location identifier": "F5", - "sample identifier": "SPL38", + "location identifier": "F8", + "sample identifier": "SPL62", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -25822,7 +25822,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29975.0, + "value": 29958.0, "unit": "RFU" } }, @@ -25854,10 +25854,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_208", + "measurement identifier": "AGILENT_GEN5_TEST_ID_211", "sample document": { - "location identifier": "F5", - "sample identifier": 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30151.0, + "value": 30241.0, "unit": "RFU" } }, @@ -26238,10 +26238,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_209", + "measurement identifier": "AGILENT_GEN5_TEST_ID_212", "sample document": { - "location identifier": "F6", - "sample identifier": "SPL46", + "location identifier": "F9", + "sample identifier": "SPL70", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -26251,7 +26251,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1857.0, + "value": 1525.0, "unit": "RFU" } }, @@ -26296,8 +26296,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_356", "sample document": { - "location identifier": "F6", - "sample identifier": "SPL46", + "location identifier": "F9", + "sample identifier": "SPL70", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h 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"value": 29152.0, + "value": 16554.0, "unit": "RFU" } }, @@ -26961,10 +26961,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_199", + "measurement identifier": "AGILENT_GEN5_TEST_ID_202", "sample document": { - "location identifier": "F8", - "sample identifier": "SPL62", + "location identifier": "F11", + "sample identifier": "SPL86", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -26974,7 +26974,7 @@ "unit": "degC" }, "fluorescence": { - "value": 29958.0, + "value": 15498.0, "unit": "RFU" } }, @@ -27006,10 +27006,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_211", + "measurement identifier": "AGILENT_GEN5_TEST_ID_214", "sample document": { - "location identifier": "F8", - "sample identifier": "SPL62", + "location identifier": "F11", + "sample identifier": "SPL86", "well plate identifier": "Plate 1" }, "analytical method 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"location identifier": "G4", - "sample identifier": "SPL31", + "location identifier": "G7", + "sample identifier": "SPL55", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -30001,7 +30001,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17366.0, + "value": 17128.0, "unit": "RFU" } }, @@ -30033,10 +30033,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_231", + "measurement identifier": "AGILENT_GEN5_TEST_ID_234", "sample document": { - "location identifier": "G4", - "sample identifier": "SPL31", + "location identifier": "G7", + "sample identifier": "SPL55", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -30046,7 +30046,7 @@ "unit": "degC" }, "fluorescence": { - "value": 15956.0, + "value": 15831.0, "unit": "RFU" } }, @@ -30078,10 +30078,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_243", + "measurement identifier": "AGILENT_GEN5_TEST_ID_246", "sample document": { - "location identifier": "G4", - "sample identifier": "SPL31", + "location identifier": "G7", + "sample identifier": "SPL55", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -30091,7 +30091,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1581.0, + "value": 1442.0, "unit": "RFU" } }, @@ -30136,8 +30136,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_366", "sample document": { - "location identifier": "G4", - "sample identifier": "SPL31", + "location identifier": "G7", + "sample identifier": "SPL55", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -30169,7 +30169,7 @@ 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"location identifier": "G8", - "sample identifier": "SPL63", + "location identifier": "G11", + "sample identifier": "SPL87", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -31537,7 +31537,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17056.0, + "value": 16758.0, "unit": "RFU" } }, @@ -31569,10 +31569,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_235", + "measurement identifier": "AGILENT_GEN5_TEST_ID_238", "sample document": { - "location identifier": "G8", - "sample identifier": "SPL63", + "location identifier": "G11", + "sample identifier": "SPL87", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -31582,7 +31582,7 @@ "unit": "degC" }, "fluorescence": { - "value": 15579.0, + "value": 15672.0, "unit": "RFU" } }, @@ -31614,10 +31614,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_247", + "measurement identifier": "AGILENT_GEN5_TEST_ID_250", "sample document": { - "location identifier": "G8", - "sample identifier": "SPL63", + "location identifier": "G11", + "sample identifier": "SPL87", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -31627,7 +31627,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1378.0, + "value": 548.0, "unit": "RFU" } }, @@ -31672,8 +31672,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_370", "sample document": { - "location identifier": "G8", - "sample identifier": "SPL63", + "location identifier": "G11", + "sample identifier": "SPL87", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -31705,7 +31705,7 @@ 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continious agitation 40 C.prt", @@ -33841,7 +33841,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17577.0, + "value": 17619.0, "unit": "RFU" } }, @@ -33873,10 +33873,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_265", + "measurement identifier": "AGILENT_GEN5_TEST_ID_268", "sample document": { - "location identifier": "H2", - "sample identifier": "SPL16", + "location identifier": "H5", + "sample identifier": "SPL40", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -33886,7 +33886,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16197.0, + "value": 16099.0, "unit": "RFU" } }, @@ -33918,10 +33918,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_277", + "measurement identifier": "AGILENT_GEN5_TEST_ID_280", "sample document": { - "location identifier": "H2", - "sample identifier": "SPL16", + "location identifier": "H5", + 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"location identifier": "H3", - "sample identifier": "SPL24", + "location identifier": "H6", + "sample identifier": "SPL48", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -34225,7 +34225,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17607.0, + "value": 17647.0, "unit": "RFU" } }, @@ -34257,10 +34257,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_266", + "measurement identifier": "AGILENT_GEN5_TEST_ID_269", "sample document": { - "location identifier": "H3", - "sample identifier": "SPL24", + "location identifier": "H6", + "sample identifier": "SPL48", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -34270,7 +34270,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16220.0, + "value": 16172.0, "unit": "RFU" } }, @@ -34302,10 +34302,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_278", + "measurement identifier": "AGILENT_GEN5_TEST_ID_281", "sample document": { - "location identifier": "H3", - "sample identifier": "SPL24", + "location identifier": "H6", + "sample identifier": "SPL48", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -34315,7 +34315,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1165.0, + "value": 1387.0, "unit": "RFU" } }, @@ -34360,8 +34360,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_377", "sample document": { - "location identifier": "H3", - "sample identifier": "SPL24", + "location identifier": "H6", + "sample identifier": "SPL48", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -34393,7 +34393,7 @@ 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identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -34654,7 +34654,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16268.0, + "value": 16092.0, "unit": "RFU" } }, @@ -34686,10 +34686,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_279", + "measurement identifier": "AGILENT_GEN5_TEST_ID_282", "sample document": { - "location identifier": "H4", - "sample identifier": "SPL32", + "location identifier": "H7", + "sample identifier": "SPL56", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -34699,7 +34699,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1183.0, + "value": 1487.0, "unit": "RFU" } }, @@ -34744,8 +34744,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_378", "sample document": { - "location identifier": "H4", - "sample identifier": "SPL32", + "location 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identifier": "AGILENT_GEN5_TEST_ID_271", "sample document": { - "location identifier": "H5", - "sample identifier": "SPL40", + "location identifier": "H8", + "sample identifier": "SPL64", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35038,7 +35038,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16099.0, + "value": 16033.0, "unit": "RFU" } }, @@ -35070,10 +35070,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_280", + "measurement identifier": "AGILENT_GEN5_TEST_ID_283", "sample document": { - "location identifier": "H5", - "sample identifier": "SPL40", + "location identifier": "H8", + "sample identifier": "SPL64", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35083,7 +35083,7 @@ "unit": "degC" }, "fluorescence": { 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continious agitation 40 C.prt", @@ -35377,7 +35377,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17647.0, + "value": 17326.0, "unit": "RFU" } }, @@ -35409,10 +35409,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_269", + "measurement identifier": "AGILENT_GEN5_TEST_ID_272", "sample document": { - "location identifier": "H6", - "sample identifier": "SPL48", + "location identifier": "H9", + "sample identifier": "SPL72", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35422,7 +35422,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16172.0, + "value": 15934.0, "unit": "RFU" } }, @@ -35454,10 +35454,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_281", + "measurement identifier": "AGILENT_GEN5_TEST_ID_284", "sample document": { - "location identifier": "H6", - "sample identifier": "SPL48", + "location identifier": "H9", + 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"location identifier": "H7", - "sample identifier": "SPL56", + "location identifier": "H10", + "sample identifier": "SPL80", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35761,7 +35761,7 @@ "unit": "degC" }, "fluorescence": { - "value": 17486.0, + "value": 17454.0, "unit": "RFU" } }, @@ -35793,10 +35793,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_270", + "measurement identifier": "AGILENT_GEN5_TEST_ID_273", "sample document": { - "location identifier": "H7", - "sample identifier": "SPL56", + "location identifier": "H10", + "sample identifier": "SPL80", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35806,7 +35806,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16092.0, + "value": 16000.0, "unit": "RFU" } }, @@ -35838,10 +35838,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_282", + "measurement identifier": "AGILENT_GEN5_TEST_ID_285", "sample document": { - "location identifier": "H7", - "sample identifier": "SPL56", + "location identifier": "H10", + "sample identifier": "SPL80", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35851,7 +35851,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1487.0, + "value": 1332.0, "unit": "RFU" } }, @@ -35896,8 +35896,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_381", "sample document": { - "location identifier": "H7", - "sample identifier": "SPL56", + "location identifier": "H10", + "sample identifier": "SPL80", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -35929,7 +35929,7 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"analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -36190,7 +36190,7 @@ "unit": "degC" }, "fluorescence": { - "value": 16033.0, + "value": 17339.0, "unit": "RFU" } }, @@ -36222,10 +36222,10 @@ } ] }, - "measurement identifier": "AGILENT_GEN5_TEST_ID_283", + "measurement identifier": "AGILENT_GEN5_TEST_ID_286", "sample document": { - "location identifier": "H8", - "sample identifier": "SPL64", + "location identifier": "H11", + "sample identifier": "SPL88", "well plate identifier": "Plate 1" }, "analytical method identifier": "J:\\Gemini\\Pharmaceutical Development\\Synergy H1B\\Templates\\96h continious agitation 40 C.prt", @@ -36235,7 +36235,7 @@ "unit": "degC" }, "fluorescence": { - "value": 1242.0, + "value": 203.0, "unit": "RFU" } }, @@ -36280,8 +36280,8 @@ }, "measurement identifier": "AGILENT_GEN5_TEST_ID_382", "sample document": { - "location identifier": "H8", - "sample identifier": "SPL64", + 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identifier": "AGILENT_GEN5_TEST_ID_2300", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": -25430.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3137", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2300", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": 0.958 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3138", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2300", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": -36410.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3139", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2300", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": 0.939 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3140", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2300", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:450,490", + "calculated result": { + "unit": "(unitless)", + "value": 1332.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3141", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:295,350", + "calculated result": { + "unit": "(unitless)", + "value": 16000.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3142", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:295,335", + "calculated result": { + "unit": "(unitless)", + "value": 17454.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3143", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 2:450,490]", + "calculated result": { + "unit": "(unitless)", + "value": -5200.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3144", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 2:450,490]", + "calculated result": { + "unit": "(unitless)", + "value": 0.867 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3145", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": -23920.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3146", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": 0.946 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3147", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": -33770.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3148", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": 0.926 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3149", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2301", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:450,490", + "calculated result": { + "unit": "(unitless)", + "value": 203.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3150", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:295,350", + "calculated result": { + "unit": "(unitless)", + "value": 17339.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3151", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:295,335", + "calculated result": { + "unit": "(unitless)", + "value": 18318.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3152", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 2:450,490]", + "calculated result": { + "unit": "(unitless)", + "value": -410.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3153", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 2:450,490]", + "calculated result": { + "unit": "(unitless)", + "value": 0.71 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3154", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": -23350.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3155", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": 0.948 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3156", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": -30420.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3157", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": 0.953 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3158", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2302", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:450,490", + "calculated result": { + "unit": "(unitless)", + "value": 202.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3159", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:295,350", + "calculated result": { + "unit": "(unitless)", + "value": 17353.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3160", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Read 1:295,335", + "calculated result": { + "unit": "(unitless)", + "value": 18241.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3161", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 2:450,490]", + "calculated result": { + "unit": "(unitless)", + "value": -460.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3162", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 2:450,490]", + "calculated result": { + "unit": "(unitless)", + "value": 0.818 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3163", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": -23410.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3164", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,350]", + "calculated result": { + "unit": "(unitless)", + "value": 0.949 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3165", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "Max V [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": -27370.0 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3166", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + }, + { + "calculated data name": "R-Squared [Read 3:295,335]", + "calculated result": { + "unit": "(unitless)", + "value": 0.958 + }, + "calculated data identifier": "AGILENT_GEN5_TEST_ID_3167", + "data source aggregate document": { + "data source document": [ + { + "data source identifier": "AGILENT_GEN5_TEST_ID_2303", + "data source feature": "fluorescence emission profile data cube" + } + ] + } + } + ] + }, "data system document": { "ASM file identifier": "Synergy instrument datafile (Fibrillation data) - TXT format.json", "data system instance identifier": "N/A", diff --git a/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json b/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json index 3c4777c5c..637705742 100644 --- a/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json +++ b/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json @@ -10251,7 +10251,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.txt", "file name": "kinetic_helper_gene_growth_curve.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.90", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.0.1" }, diff --git a/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json b/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json index 21be31fae..75a1ca398 100644 --- a/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json +++ b/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json @@ -13164,7 +13164,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.txt", "file name": "multiple_read_modes.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.87", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.15.15" }, diff --git a/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json b/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json index 41081a481..a993a80ec 100644 --- a/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json +++ b/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json @@ -7884,7 +7884,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.txt", "file name": "two_same_read_modes.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.87", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.15.15" }, From 2fbe28d1b8d2d2e81183e675aedb6b51477d7682 Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Thu, 11 Dec 2025 14:32:04 -0500 Subject: [PATCH 3/7] Undo unneeded changes --- .../testdata/absorbance/kinetic_helper_gene_growth_curve.json | 2 +- .../testdata/multi_read_modes/multiple_read_modes.json | 2 +- .../testdata/multi_read_modes/two_same_read_modes.json | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json b/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json index 637705742..3c4777c5c 100644 --- a/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json +++ b/tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.json @@ -10251,7 +10251,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/absorbance/kinetic_helper_gene_growth_curve.txt", "file name": "kinetic_helper_gene_growth_curve.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.111", + "ASM converter version": "0.1.90", "software name": "Gen5", "software version": "3.0.1" }, diff --git a/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json b/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json index 75a1ca398..21be31fae 100644 --- a/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json +++ b/tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.json @@ -13164,7 +13164,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/multi_read_modes/multiple_read_modes.txt", "file name": "multiple_read_modes.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.111", + "ASM converter version": "0.1.87", "software name": "Gen5", "software version": "3.15.15" }, diff --git a/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json b/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json index a993a80ec..41081a481 100644 --- a/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json +++ b/tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.json @@ -7884,7 +7884,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/multi_read_modes/two_same_read_modes.txt", "file name": "two_same_read_modes.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.111", + "ASM converter version": "0.1.87", "software name": "Gen5", "software version": "3.15.15" }, From c23568cee2561e6d472410098f0bb0527431706b Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Thu, 11 Dec 2025 14:34:16 -0500 Subject: [PATCH 4/7] Remove unneeded change --- src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py | 2 -- 1 file changed, 2 deletions(-) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py index 7d35949ea..fc924a773 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py @@ -1109,8 +1109,6 @@ def create_kinetic_results( value=value, ) for well_position, well_calculated_data in calculated_data.items() - if well_position - in groups_by_well_position # Only create for wells with measurements for label, value in well_calculated_data ] From 97591d0e2aa7680de6d49d1d7c42ca4e598056d8 Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Thu, 11 Dec 2025 15:05:22 -0500 Subject: [PATCH 5/7] Clean up well counts --- .../agilent_gen5/agilent_gen5_structure.py | 31 ++- src/allotropy/parsers/constants.py | 6 +- ...129_BNCH654563_spectralScan_example01.json | 194 +++++++++--------- .../testdata/absorbance/spectrum_data.json | 194 +++++++++--------- .../spectrum_data_with_nan_value.json | 194 +++++++++--------- .../fluorescence/spectrum_emission_data.json | 4 +- .../spectrum_excitation_data.json | 4 +- .../testdata/luminescence/spectral_scan.json | 4 +- 8 files changed, 313 insertions(+), 318 deletions(-) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py index fc924a773..e077a9b6d 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py @@ -65,9 +65,11 @@ WAVELENGTHS_KEY, ) from allotropy.parsers.constants import ( + get_well_count_by_well_ids, NEGATIVE_ZERO, NOT_APPLICABLE, POSSIBLE_WELL_COUNTS, + round_to_nearest_well_count, ) from allotropy.parsers.lines_reader import SectionLinesReader from allotropy.parsers.utils.calculated_data_documents.definition import ( @@ -948,11 +950,15 @@ def create_results( elif well_value is not None: calculated_data[well_pos].append((label, well_value)) + # Calculate plate well count from data dimensions and round to nearest valid count + plate_well_count = round_to_nearest_well_count(len(set(data.index.tolist())) * len( + set(data.columns[1:].tolist()) + )) + groups = [ MeasurementGroup( measurement_time=header_data.datetime, - plate_well_count=len(set(data.index.tolist())) - * len(set(data.columns[1:].tolist())), + plate_well_count=plate_well_count, measurements=[ _create_measurement( measurement, @@ -1046,23 +1052,11 @@ def create_kinetic_results( # Get all well positions from kinetic measurements (primary) or calculated data # Preserve order from kinetic_measurements, then add any wells only in calculated_data well_positions = list(kinetic_measurements.keys()) - for well_pos in calculated_data.keys(): - if well_pos not in well_positions: - well_positions.append(well_pos) - - # Determine plate_well_count from data if header value is not reliable - # For kinetic data, if header has a valid plate count, use it - # Otherwise count wells from the actual data - if header_data.plate_well_count and header_data.plate_well_count > 1: - plate_well_count = int(header_data.plate_well_count) - else: - # Fallback: count wells from the data - plate_well_count = len(well_positions) groups = [ MeasurementGroup( measurement_time=header_data.datetime, - plate_well_count=plate_well_count, + plate_well_count=get_well_count_by_well_ids(well_locations=well_positions), measurements=[ _create_measurement( measurement := MeasurementData( @@ -1295,7 +1289,7 @@ def create_spectrum_results( if not read_data: return [], [] - measurements = [] + measurements: list[Measurement] = [] if read_data.read_mode == ReadMode.ABSORBANCE: measurement_type = MeasurementType.ULTRAVIOLET_ABSORBANCE_CUBE_SPECTRUM elif read_data.read_mode == ReadMode.FLUORESCENCE and read_data.is_emission: @@ -1430,10 +1424,13 @@ def create_spectrum_results( else: measurement.error_document = errors + # Calculate plate_well_count from all well positions in header (including empty wells) + plate_well_count = get_well_count_by_well_ids(well_locations=[col for col in data.columns if col != "Wavelength"]) + measurement_groups = [ MeasurementGroup( measurement_time=header_data.datetime, - plate_well_count=header_data.plate_well_count, + plate_well_count=plate_well_count, measurements=[measurement], ) for measurement in measurements diff --git a/src/allotropy/parsers/constants.py b/src/allotropy/parsers/constants.py index 128e5631d..8b05937d1 100644 --- a/src/allotropy/parsers/constants.py +++ b/src/allotropy/parsers/constants.py @@ -29,7 +29,7 @@ def round_to_nearest_well_count( def get_well_count_by_well_ids( well_identifiers: list[int] | None = None, well_locations: list[str] | None = None -) -> int | None: +) -> int: if not well_identifiers and not well_locations: msg = "Must provide either well_identifiers or well_locations when determining plate size." raise AllotropeConversionError(msg) @@ -43,6 +43,4 @@ def get_well_count_by_well_ids( ord(largest_column.upper()) - ord("A") + 1 ) * largest_row largest_well_number = max(well_number_by_ids, well_number_by_position) - if largest_well_number: - return round_to_nearest_well_count(largest_well_number) - return None + return round_to_nearest_well_count(largest_well_number) diff --git a/tests/parsers/agilent_gen5/testdata/absorbance/240307_114129_BNCH654563_spectralScan_example01.json b/tests/parsers/agilent_gen5/testdata/absorbance/240307_114129_BNCH654563_spectralScan_example01.json index 387802a31..befdd91f8 100644 --- a/tests/parsers/agilent_gen5/testdata/absorbance/240307_114129_BNCH654563_spectralScan_example01.json +++ b/tests/parsers/agilent_gen5/testdata/absorbance/240307_114129_BNCH654563_spectralScan_example01.json @@ -58,7 +58,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -120,7 +120,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -182,7 +182,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -244,7 +244,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -306,7 +306,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -368,7 +368,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -430,7 +430,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -492,7 +492,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -554,7 +554,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -616,7 +616,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -678,7 +678,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -740,7 +740,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -802,7 +802,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -864,7 +864,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -926,7 +926,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -988,7 +988,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1050,7 +1050,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1112,7 +1112,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1174,7 +1174,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1236,7 +1236,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1298,7 +1298,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1360,7 +1360,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1422,7 +1422,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1484,7 +1484,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1546,7 +1546,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1608,7 +1608,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1670,7 +1670,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1732,7 +1732,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1794,7 +1794,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1856,7 +1856,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1918,7 +1918,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1980,7 +1980,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2042,7 +2042,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2104,7 +2104,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2166,7 +2166,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2228,7 +2228,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2290,7 +2290,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2352,7 +2352,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2414,7 +2414,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2476,7 +2476,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2538,7 +2538,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2600,7 +2600,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2662,7 +2662,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2724,7 +2724,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2786,7 +2786,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2848,7 +2848,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2910,7 +2910,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2972,7 +2972,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3034,7 +3034,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3096,7 +3096,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3158,7 +3158,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3220,7 +3220,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3282,7 +3282,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3344,7 +3344,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3406,7 +3406,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3468,7 +3468,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3530,7 +3530,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3592,7 +3592,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3654,7 +3654,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3716,7 +3716,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3778,7 +3778,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3840,7 +3840,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3902,7 +3902,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3964,7 +3964,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4026,7 +4026,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4088,7 +4088,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4150,7 +4150,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4212,7 +4212,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4274,7 +4274,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4336,7 +4336,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4398,7 +4398,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4460,7 +4460,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4522,7 +4522,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4584,7 +4584,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4646,7 +4646,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4708,7 +4708,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4770,7 +4770,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4832,7 +4832,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4894,7 +4894,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4956,7 +4956,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5018,7 +5018,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5080,7 +5080,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5142,7 +5142,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5204,7 +5204,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5266,7 +5266,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5328,7 +5328,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5390,7 +5390,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5452,7 +5452,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5514,7 +5514,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5576,7 +5576,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5638,7 +5638,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5700,7 +5700,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5762,7 +5762,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5824,7 +5824,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5886,7 +5886,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5948,7 +5948,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -7501,7 +7501,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/absorbance/240307_114129_BNCH654563_spectralScan_example01.txt", "file name": "240307_114129_BNCH654563_spectralScan_example01.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.90", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.12.08" }, diff --git a/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data.json b/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data.json index f72443b12..7721b4ae7 100644 --- a/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data.json +++ b/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data.json @@ -66,7 +66,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -141,7 +141,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -203,7 +203,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -265,7 +265,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -327,7 +327,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -389,7 +389,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -451,7 +451,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -513,7 +513,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -575,7 +575,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -637,7 +637,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -699,7 +699,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -761,7 +761,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -823,7 +823,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -885,7 +885,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -947,7 +947,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1009,7 +1009,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1071,7 +1071,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1133,7 +1133,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1195,7 +1195,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1257,7 +1257,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1319,7 +1319,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1381,7 +1381,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1443,7 +1443,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1505,7 +1505,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1567,7 +1567,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1629,7 +1629,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1691,7 +1691,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1753,7 +1753,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1815,7 +1815,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1877,7 +1877,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1939,7 +1939,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2001,7 +2001,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2063,7 +2063,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2125,7 +2125,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2187,7 +2187,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2249,7 +2249,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2311,7 +2311,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2373,7 +2373,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2435,7 +2435,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2497,7 +2497,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2559,7 +2559,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2621,7 +2621,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2683,7 +2683,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2745,7 +2745,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2807,7 +2807,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2869,7 +2869,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2931,7 +2931,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2993,7 +2993,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3055,7 +3055,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3117,7 +3117,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3179,7 +3179,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3241,7 +3241,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3303,7 +3303,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3365,7 +3365,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3427,7 +3427,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3489,7 +3489,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3551,7 +3551,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3613,7 +3613,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3675,7 +3675,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3737,7 +3737,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3799,7 +3799,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3861,7 +3861,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3923,7 +3923,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3985,7 +3985,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4047,7 +4047,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4109,7 +4109,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4171,7 +4171,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4233,7 +4233,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4295,7 +4295,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4357,7 +4357,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4419,7 +4419,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4481,7 +4481,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4543,7 +4543,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4605,7 +4605,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4667,7 +4667,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4729,7 +4729,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4791,7 +4791,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4853,7 +4853,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4915,7 +4915,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4977,7 +4977,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5039,7 +5039,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5101,7 +5101,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5163,7 +5163,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5225,7 +5225,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5287,7 +5287,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5349,7 +5349,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5411,7 +5411,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5473,7 +5473,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5535,7 +5535,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5597,7 +5597,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5659,7 +5659,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5721,7 +5721,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5783,7 +5783,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5845,7 +5845,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5907,7 +5907,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5969,7 +5969,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -7522,7 +7522,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data.txt", "file name": "spectrum_data.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.90", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.12.08" }, diff --git a/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data_with_nan_value.json b/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data_with_nan_value.json index 973b17524..28273c6bf 100644 --- a/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data_with_nan_value.json +++ b/tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data_with_nan_value.json @@ -67,7 +67,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -129,7 +129,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -191,7 +191,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -253,7 +253,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -315,7 +315,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -377,7 +377,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -439,7 +439,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -501,7 +501,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -563,7 +563,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -625,7 +625,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -687,7 +687,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -749,7 +749,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -811,7 +811,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -873,7 +873,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -935,7 +935,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -997,7 +997,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1059,7 +1059,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1121,7 +1121,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1183,7 +1183,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1245,7 +1245,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1307,7 +1307,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1369,7 +1369,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1431,7 +1431,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1493,7 +1493,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1555,7 +1555,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1617,7 +1617,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1679,7 +1679,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1741,7 +1741,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1803,7 +1803,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1865,7 +1865,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1927,7 +1927,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -1989,7 +1989,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2051,7 +2051,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2113,7 +2113,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2175,7 +2175,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2237,7 +2237,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2299,7 +2299,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2361,7 +2361,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2423,7 +2423,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2485,7 +2485,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2547,7 +2547,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2609,7 +2609,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2671,7 +2671,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2733,7 +2733,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2795,7 +2795,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2857,7 +2857,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2919,7 +2919,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -2981,7 +2981,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3043,7 +3043,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3105,7 +3105,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3167,7 +3167,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3229,7 +3229,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3291,7 +3291,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3353,7 +3353,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3415,7 +3415,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3477,7 +3477,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3539,7 +3539,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3601,7 +3601,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3663,7 +3663,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3725,7 +3725,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3787,7 +3787,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3849,7 +3849,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3911,7 +3911,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -3973,7 +3973,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4035,7 +4035,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4097,7 +4097,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4159,7 +4159,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4221,7 +4221,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4283,7 +4283,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4345,7 +4345,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4407,7 +4407,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4469,7 +4469,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4531,7 +4531,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4593,7 +4593,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4655,7 +4655,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4717,7 +4717,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4779,7 +4779,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4841,7 +4841,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4903,7 +4903,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -4965,7 +4965,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5027,7 +5027,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5089,7 +5089,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5151,7 +5151,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5213,7 +5213,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5275,7 +5275,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5337,7 +5337,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5399,7 +5399,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5461,7 +5461,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5523,7 +5523,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5585,7 +5585,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5647,7 +5647,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5709,7 +5709,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5771,7 +5771,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5833,7 +5833,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5895,7 +5895,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -5957,7 +5957,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -7510,7 +7510,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/absorbance/spectrum_data_with_nan_value.txt", "file name": "spectrum_data_with_nan_value.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.90", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.12.08" }, diff --git a/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_emission_data.json b/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_emission_data.json index 6b0450065..627cca780 100644 --- a/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_emission_data.json +++ b/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_emission_data.json @@ -84,7 +84,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -117,7 +117,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_emission_data.txt", "file name": "spectrum_emission_data.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.93", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.12.08" }, diff --git a/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_excitation_data.json b/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_excitation_data.json index 568027b3b..5b4420093 100644 --- a/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_excitation_data.json +++ b/tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_excitation_data.json @@ -83,7 +83,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -116,7 +116,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/fluorescence/spectrum_excitation_data.txt", "file name": "spectrum_excitation_data.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.93", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.12.08" }, diff --git a/tests/parsers/agilent_gen5/testdata/luminescence/spectral_scan.json b/tests/parsers/agilent_gen5/testdata/luminescence/spectral_scan.json index 5ef1d5dda..07510e279 100644 --- a/tests/parsers/agilent_gen5/testdata/luminescence/spectral_scan.json +++ b/tests/parsers/agilent_gen5/testdata/luminescence/spectral_scan.json @@ -75,7 +75,7 @@ ], "measurement time": "2024-03-07T11:31:30+00:00", "plate well count": { - "value": 96.0, + "value": 96, "unit": "#" }, "container type": "well plate" @@ -88,7 +88,7 @@ "UNC path": "tests/parsers/agilent_gen5/testdata/luminescence/spectral_scan.txt", "file name": "spectral_scan.txt", "ASM converter name": "allotropy_agilent_gen5", - "ASM converter version": "0.1.93", + "ASM converter version": "0.1.111", "software name": "Gen5", "software version": "3.12.08" }, From 16756e58f8f735b3115778ed1008c6781f40c90c Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Mon, 15 Dec 2025 15:14:43 -0500 Subject: [PATCH 6/7] Fix lint --- .../agilent_gen5/agilent_gen5_parser.py | 121 +--------------- .../agilent_gen5/agilent_gen5_reader.py | 18 +-- .../agilent_gen5/agilent_gen5_structure.py | 132 +++++++++++++++++- src/allotropy/parsers/constants.py | 2 +- 4 files changed, 144 insertions(+), 129 deletions(-) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py index df9e07524..8feaeb234 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_parser.py @@ -1,69 +1,20 @@ -from collections import defaultdict - from allotropy.allotrope.models.adm.plate_reader.rec._2025._03.plate_reader import ( Model, ) from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2025._03.plate_reader import ( Data, Mapper, - MeasurementGroup, ) -from allotropy.exceptions import AllotropeConversionError from allotropy.named_file_contents import NamedFileContents from allotropy.parsers.agilent_gen5.agilent_gen5_reader import AgilentGen5Reader from allotropy.parsers.agilent_gen5.agilent_gen5_structure import ( create_metadata, - get_processor, -) -from allotropy.parsers.agilent_gen5.constants import ( - NO_MEASUREMENTS_ERROR, + process_all_reads, ) from allotropy.parsers.release_state import ReleaseState -from allotropy.parsers.utils.calculated_data_documents.definition import ( - CalculatedDocument, -) from allotropy.parsers.vendor_parser import VendorParser -def merge_measurement_groups( - all_groups: list[list[MeasurementGroup]], -) -> list[MeasurementGroup]: - """Merge multiple lists of measurement groups by well position. - - Each list of measurement groups represents results from a different read/filter set. - This function combines them so that each well has all its measurements in a single group. - """ - # Group by well position - groups_by_well: dict[str, list[MeasurementGroup]] = defaultdict(list) - for group_list in all_groups: - for group in group_list: - # Get the well position from the first measurement in the group - if group.measurements: - well_pos = group.measurements[0].location_identifier - groups_by_well[well_pos].append(group) - - # Merge measurements for each well - merged_groups = [] - for well_pos in groups_by_well.keys(): - groups = groups_by_well[well_pos] - # Take metadata from the first group - base_group = groups[0] - # Collect all measurements from all groups for this well - all_measurements = [] - for group in groups: - all_measurements.extend(group.measurements) - - # Create merged group - merged_group = MeasurementGroup( - measurement_time=base_group.measurement_time, - plate_well_count=base_group.plate_well_count, - measurements=all_measurements, - ) - merged_groups.append(merged_group) - - return merged_groups - - class AgilentGen5Parser(VendorParser[Data, Model]): DISPLAY_NAME = "Agilent Gen5" RELEASE_STATE = ReleaseState.RECOMMENDED @@ -74,73 +25,11 @@ def create_data(self, named_file_contents: NamedFileContents) -> Data: reader = AgilentGen5Reader(named_file_contents) context = reader.extract_data_context(named_file_contents.original_file_path) - # Process each ReadData entry separately and collect results - all_measurement_groups: list[list[MeasurementGroup]] = [] - all_calculated_data: list[CalculatedDocument] = [] - - # Track which reads use the combined results section to avoid processing it multiple times - combined_results_read_indices: list[int] = [] - - for read_index, read_data in enumerate(context.read_data, start=1): - # Create a test sub-context to check if this is kinetic - test_context = reader.create_read_context(context, read_data, read_index) - is_kinetic = test_context.has_kinetic_measurements - - if is_kinetic and len(read_data.measurement_labels) > 1: - # Split kinetic read into separate sub-reads per filter set - # Each label gets its own Time section processed separately - # Sort labels consistently to ensure stable output - sorted_labels = sorted( - read_data.measurement_labels, key=lambda x: (len(x), x) - ) - for label in sorted_labels: - sub_context = reader.create_read_context( - context, read_data, read_index, specific_label=label - ) - processor = get_processor(sub_context) - measurement_groups, calculated_data = processor.process(sub_context) - all_measurement_groups.append(measurement_groups) - all_calculated_data.extend(calculated_data) - else: - # Check if this read uses the combined results section - uses_combined_results = ( - not test_context.has_kinetic_measurements - and test_context.results_section - and reader.get_results_section() == test_context.results_section - ) - - if uses_combined_results: - # Track this read for combined processing - combined_results_read_indices.append(read_index) - else: - # Process the read independently - sub_context = test_context - processor = get_processor(sub_context) - measurement_groups, calculated_data = processor.process(sub_context) - all_measurement_groups.append(measurement_groups) - all_calculated_data.extend(calculated_data) - - # Process all reads that use the combined results section together (only once) - if combined_results_read_indices: - # Use the first read's context but with all read_data included - first_read_index = combined_results_read_indices[0] - first_read_data = context.read_data[first_read_index - 1] - combined_context = reader.create_read_context( - context, first_read_data, first_read_index - ) - processor = get_processor(combined_context) - measurement_groups, calculated_data = processor.process(combined_context) - all_measurement_groups.append(measurement_groups) - all_calculated_data.extend(calculated_data) - - # Merge measurement groups by well position - merged_groups = merge_measurement_groups(all_measurement_groups) - - if not merged_groups: - raise AllotropeConversionError(NO_MEASUREMENTS_ERROR) + # Process all reads and merge results + measurement_groups, calculated_data = process_all_reads(reader, context) return Data( metadata=create_metadata(context.header_data), - measurement_groups=merged_groups, - calculated_data=all_calculated_data, + measurement_groups=measurement_groups, + calculated_data=calculated_data, ) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py index 1bce1e254..1978b522c 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py @@ -73,20 +73,20 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: last_section_name: str | None = None last_read_label: str | None = None - while plate_reader.current_line_exists(): - lines = list(plate_reader.pop_until_empty()) - - # Skip empty sections - if not lines: - plate_reader.drop_empty() - continue - + while lines := list(plate_reader.pop_until_empty()): section_name = lines[0].split("\t")[0].strip(":") # Check if this is a "Read X:label" section (single line, starts with "Read ") + # If so, store the label and immediately read the next section if len(lines) == 1 and section_name.startswith("Read "): last_read_label = section_name - continue + plate_reader.drop_empty() + # Read the actual data section following this label + lines = list(plate_reader.pop_until_empty()) + if not lines: + # No data section after the label, just continue + continue + section_name = lines[0].split("\t")[0].strip(":") # If this is a Time section, associate it with a read label if we have one if section_name == "Time": diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py index e077a9b6d..e9ceb1751 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py @@ -951,9 +951,12 @@ def create_results( calculated_data[well_pos].append((label, well_value)) # Calculate plate well count from data dimensions and round to nearest valid count - plate_well_count = round_to_nearest_well_count(len(set(data.index.tolist())) * len( + calculated_well_count = len(set(data.index.tolist())) * len( set(data.columns[1:].tolist()) - )) + ) + plate_well_count = ( + round_to_nearest_well_count(calculated_well_count) or calculated_well_count + ) groups = [ MeasurementGroup( @@ -1425,7 +1428,9 @@ def create_spectrum_results( measurement.error_document = errors # Calculate plate_well_count from all well positions in header (including empty wells) - plate_well_count = get_well_count_by_well_ids(well_locations=[col for col in data.columns if col != "Wavelength"]) + plate_well_count = get_well_count_by_well_ids( + well_locations=[col for col in data.columns if col != "Wavelength"] + ) measurement_groups = [ MeasurementGroup( @@ -1700,3 +1705,124 @@ def get_processor( msg = "No suitable processor found for the data." raise AllotropeConversionError(msg) + + +def merge_measurement_groups( + all_groups: list[list[MeasurementGroup]], +) -> list[MeasurementGroup]: + """Merge multiple lists of measurement groups by well position. + + Each list of measurement groups represents results from a different read/filter set. + This function combines them so that each well has all its measurements in a single group. + """ + from collections import defaultdict + + # Group by well position + groups_by_well: dict[str, list[MeasurementGroup]] = defaultdict(list) + for group_list in all_groups: + for group in group_list: + # Get the well position from the first measurement in the group + if group.measurements: + well_pos = group.measurements[0].location_identifier + groups_by_well[well_pos].append(group) + + # Merge measurements for each well + merged_groups = [] + for well_pos in groups_by_well.keys(): + groups = groups_by_well[well_pos] + # Take metadata from the first group + base_group = groups[0] + # Collect all measurements from all groups for this well + all_measurements = [] + for group in groups: + all_measurements.extend(group.measurements) + + # Create merged group + merged_group = MeasurementGroup( + measurement_time=base_group.measurement_time, + plate_well_count=base_group.plate_well_count, + measurements=all_measurements, + ) + merged_groups.append(merged_group) + + return merged_groups + + +def process_all_reads( + reader: Any, context: Gen5DataContext +) -> tuple[list[MeasurementGroup], list[CalculatedDocument]]: + """Process all ReadData entries and return merged measurement groups and calculated data. + + Args: + reader: The AgilentGen5Reader instance + context: The main Gen5DataContext with all data + + Returns: + Tuple of (merged measurement groups, calculated data documents) + """ + # Process each ReadData entry separately and collect results + all_measurement_groups: list[list[MeasurementGroup]] = [] + all_calculated_data: list[CalculatedDocument] = [] + + # Track which reads use the combined results section to avoid processing it multiple times + combined_results_read_indices: list[int] = [] + + for read_index, read_data in enumerate(context.read_data, start=1): + # Create a test sub-context to check if this is kinetic + test_context = reader.create_read_context(context, read_data, read_index) + is_kinetic = test_context.has_kinetic_measurements + + if is_kinetic and len(read_data.measurement_labels) > 1: + # Split kinetic read into separate sub-reads per filter set + # Each label gets its own Time section processed separately + # Sort labels consistently to ensure stable output + sorted_labels = sorted( + read_data.measurement_labels, key=lambda x: (len(x), x) + ) + for label in sorted_labels: + sub_context = reader.create_read_context( + context, read_data, read_index, specific_label=label + ) + processor = get_processor(sub_context) + measurement_groups, calculated_data = processor.process(sub_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) + else: + # Check if this read uses the combined results section + uses_combined_results = ( + not test_context.has_kinetic_measurements + and test_context.results_section + and reader.get_results_section() == test_context.results_section + ) + + if uses_combined_results: + # Track this read for combined processing + combined_results_read_indices.append(read_index) + else: + # Process the read independently + sub_context = test_context + processor = get_processor(sub_context) + measurement_groups, calculated_data = processor.process(sub_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) + + # Process all reads that use the combined results section together (only once) + if combined_results_read_indices: + # Use the first read's context but with all read_data included + first_read_index = combined_results_read_indices[0] + first_read_data = context.read_data[first_read_index - 1] + combined_context = reader.create_read_context( + context, first_read_data, first_read_index + ) + processor = get_processor(combined_context) + measurement_groups, calculated_data = processor.process(combined_context) + all_measurement_groups.append(measurement_groups) + all_calculated_data.extend(calculated_data) + + # Merge measurement groups by well position + merged_groups = merge_measurement_groups(all_measurement_groups) + + if not merged_groups: + raise AllotropeConversionError(NO_MEASUREMENTS_ERROR) + + return merged_groups, all_calculated_data diff --git a/src/allotropy/parsers/constants.py b/src/allotropy/parsers/constants.py index 8b05937d1..3b61391a0 100644 --- a/src/allotropy/parsers/constants.py +++ b/src/allotropy/parsers/constants.py @@ -43,4 +43,4 @@ def get_well_count_by_well_ids( ord(largest_column.upper()) - ord("A") + 1 ) * largest_row largest_well_number = max(well_number_by_ids, well_number_by_position) - return round_to_nearest_well_count(largest_well_number) + return round_to_nearest_well_count(largest_well_number) or largest_well_number From 8b200d896aef830a8183e09ba80401296a5f5072 Mon Sep 17 00:00:00 2001 From: Nathan Stender Date: Mon, 15 Dec 2025 15:28:33 -0500 Subject: [PATCH 7/7] Fix lint --- .../parsers/agilent_gen5/agilent_gen5_reader.py | 17 ++++++++--------- .../agilent_gen5/agilent_gen5_structure.py | 2 -- 2 files changed, 8 insertions(+), 11 deletions(-) diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py index 1978b522c..e607dcfb4 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_reader.py @@ -1,3 +1,4 @@ +from dataclasses import replace from io import StringIO from allotropy.allotrope.schema_mappers.adm.plate_reader.rec._2025._03.plate_reader import ( @@ -56,7 +57,7 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: self.header_data = df_to_series_data(df) self.sections = {} - self.time_sections: dict[str, list[str]] = {} + self.kinetic_sections: dict[str, list[str]] = {} # Special handling for the "Procedure Details" section, which has an empty line after the title. assert_not_none( @@ -92,12 +93,12 @@ def __init__(self, named_file_contents: NamedFileContents) -> None: if section_name == "Time": if last_read_label: # Format: "Read X:label" -> Time section - self.time_sections[last_read_label] = lines + self.kinetic_sections[last_read_label] = lines last_read_label = None elif last_section_name: # Format: "{label}" section followed by Time section # Store with just the label as key for kinetic files - self.time_sections[last_section_name] = lines + self.kinetic_sections[last_section_name] = lines else: # Standalone Time section (shouldn't happen, but store it anyway) self.sections[section_name] = lines @@ -239,10 +240,10 @@ def create_read_context( label_only_key = label time_section_lines = None - if time_key in self.time_sections: - time_section_lines = self.time_sections[time_key] - elif label_only_key in self.time_sections: - time_section_lines = self.time_sections[label_only_key] + if time_key in self.kinetic_sections: + time_section_lines = self.kinetic_sections[time_key] + elif label_only_key in self.kinetic_sections: + time_section_lines = self.kinetic_sections[label_only_key] if time_section_lines: has_time_section = True @@ -281,8 +282,6 @@ def create_read_context( # If specific_label was provided, create a modified ReadData with only that label if specific_label: - from dataclasses import replace - read_data = replace(read_data, measurement_labels={specific_label}) # If using combined results section, include all read_data so all measurement labels are known diff --git a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py index e9ceb1751..832259a59 100644 --- a/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py +++ b/src/allotropy/parsers/agilent_gen5/agilent_gen5_structure.py @@ -1715,8 +1715,6 @@ def merge_measurement_groups( Each list of measurement groups represents results from a different read/filter set. This function combines them so that each well has all its measurements in a single group. """ - from collections import defaultdict - # Group by well position groups_by_well: dict[str, list[MeasurementGroup]] = defaultdict(list) for group_list in all_groups: