diff --git a/SUPPORTED_INSTRUMENT_SOFTWARE.adoc b/SUPPORTED_INSTRUMENT_SOFTWARE.adoc index 4e4d480188..016a6d5ac3 100644 --- a/SUPPORTED_INSTRUMENT_SOFTWARE.adoc +++ b/SUPPORTED_INSTRUMENT_SOFTWARE.adoc @@ -64,7 +64,7 @@ The parsers follow maturation levels of: Recommended, Candidate Release, Working |Thermo Fisher Scientific VISIONlite|Recommended|BENCHLING/2023/12 .2+|dPCR|AppBio AbsoluteQ|Recommended|BENCHLING/2023/09 |Qiacuity dPCR|Recommended|BENCHLING/2023/09 -.3+|qPCR|AppBio QuantStudio RT-PCR|Recommended|REC/2024/09 -|AppBio QuantStudio Design & Analysis|Recommended|REC/2024/09 -|Bio-Rad CFX Maestro|Recommended|REC/2024/09 +.3+|qPCR|AppBio QuantStudio RT-PCR|Recommended|REC/2026/03 +|AppBio QuantStudio Design & Analysis|Recommended|REC/2026/03 +|Bio-Rad CFX Maestro|Recommended|REC/2026/03 |=== \ No newline at end of file diff --git a/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/core.py b/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/core.py new file mode 100644 index 0000000000..3418968cb5 --- /dev/null +++ b/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/core.py @@ -0,0 +1,270 @@ +# generated by allotropy.schema_gen +# Re-exports imported types so downstream modules can import from here. +# ruff: noqa: F401 + +from __future__ import annotations + +from dataclasses import dataclass, field +from typing import Any + +from allotropy.allotrope.models.shared.definitions.definitions import ( + TClass, + TQuantityValue, + TStatisticDatumRole, + TUnit, +) + + +@dataclass(frozen=True, kw_only=True) +class Asm: + pass + + +@dataclass(frozen=True, kw_only=True) +class MixedItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + + +@dataclass(frozen=True, kw_only=True) +class OrderedItem: + field_index: int | None = field(default=None, metadata={"json_name": "@index"}) + + +TArray = list[Any] + + +@dataclass(frozen=True, kw_only=True) +class TBooleanValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: bool + + +@dataclass(frozen=True, kw_only=True) +class TByteValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TDateTimeStampValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TDateTimeValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TDateValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TDecimalValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: float + + +@dataclass(frozen=True, kw_only=True) +class TDoubleValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: float + + +@dataclass(frozen=True, kw_only=True) +class TDurationValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TFloatValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: float + + +@dataclass(frozen=True, kw_only=True) +class TIRIValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TIntValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TIntegerValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TLongValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +TNamed = str + + +@dataclass(frozen=True, kw_only=True) +class TObject: + pass + + +TReference = str + + +TResource = str + + +@dataclass(frozen=True, kw_only=True) +class TShortValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TStringValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TTimeValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: str + + +@dataclass(frozen=True, kw_only=True) +class TUnsignedByteValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TUnsignedIntValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TUnsignedLongValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +@dataclass(frozen=True, kw_only=True) +class TUnsignedShortValueItem: + field_type: TClass = field(metadata={"json_name": "@type"}) + value: int + + +TBooleanValue = TBooleanValueItem | bool + + +TByteValue = TByteValueItem | int + + +TDateTimeStampValue = TDateTimeStampValueItem | str + + +TDateTimeValue = TDateTimeValueItem | str + + +TDateValue = TDateValueItem | str + + +TDecimalValue = TDecimalValueItem | float + + +TDoubleValue = TDoubleValueItem | float + + +TDurationValue = TDurationValueItem | str + + +TFloatValue = TFloatValueItem | float + + +TIRIValue = TIRIValueItem | str + + +TIntValue = TIntValueItem | int + + +TIntegerValue = TIntegerValueItem | int + + +TLongValue = TLongValueItem | int + + +TShortValue = TShortValueItem | int + + +TStringValue = TStringValueItem | str + + +TTimeValue = TTimeValueItem | str + + +TUnsignedByteValue = TUnsignedByteValueItem | int + + +TUnsignedIntValue = TUnsignedIntValueItem | int + + +TUnsignedLongValue = TUnsignedLongValueItem | int + + +TUnsignedShortValue = TUnsignedShortValueItem | int + + +TNumericValue = ( + TByteValue + | TDecimalValue + | TDoubleValue + | TFloatValue + | TIntValue + | TIntegerValue + | TLongValue + | TShortValue + | TUnsignedByteValue + | TUnsignedIntValue + | TUnsignedLongValue + | TUnsignedShortValue +) + + +TOrderedValue = ( + TDateTimeStampValue + | TDateTimeValue + | TDateValue + | TNumericValue + | TStringValue + | TTimeValue +) + + +@dataclass(frozen=True, kw_only=True) +class TRangeValue: + max_exclusive: TOrderedValue | None = field( + default=None, metadata={"json_name": "maxExclusive"} + ) + max_inclusive: TOrderedValue | None = field( + default=None, metadata={"json_name": "maxInclusive"} + ) + min_exclusive: TOrderedValue | None = field( + default=None, metadata={"json_name": "minExclusive"} + ) + min_inclusive: TOrderedValue | None = field( + default=None, metadata={"json_name": "minInclusive"} + ) + unit: TUnit | None = None diff --git a/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/cube.py b/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/cube.py new file mode 100644 index 0000000000..ba5dd95d14 --- /dev/null +++ b/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/cube.py @@ -0,0 +1,114 @@ +# generated by allotropy.schema_gen + +from __future__ import annotations + +from dataclasses import dataclass, field +from enum import Enum + +from allotropy.allotrope.models.adm.core.rec._2026._03.core import ( + TClass, + TUnit, +) + + +class ComponentDatatype(Enum): + double = "double" + float = "float" + decimal = "decimal" + integer = "integer" + byte = "byte" + int = "int" + short = "short" + long = "long" + string = "string" + boolean = "boolean" + date_time = "dateTime" + + +class Scale(Enum): + nominal = "nominal" + ordinal = "ordinal" + cardinal = "cardinal" + interval = "interval" + range = "range" + + +TBooleanArray = list[bool] + + +TBooleanOrNullArray = list[None | bool] + + +TNumberArray = list[float] + + +TNumberOrNullArray = list[None | float] + + +TStringArray = list[str] + + +TStringOrNullArray = list[None | str] + + +TTupleData = list[None | bool | float | str] + + +class Type(Enum): + linear = "linear" + logarithmic = "logarithmic" + + +@dataclass(frozen=True, kw_only=True) +class TDatacubeComponent: + field_component_datatype: ComponentDatatype = field( + metadata={"json_name": "@componentDatatype"} + ) + concept: TClass + scale: Scale | None = None + unit: TUnit | None = None + + +TDimensionArray = TBooleanArray | TNumberArray | TStringArray + + +TMeasureArray = TBooleanOrNullArray | TNumberOrNullArray | TStringOrNullArray + + +@dataclass(frozen=True, kw_only=True) +class TFunction: + incr: float | None = None + length: float | None = None + start: float | None = None + type: Type | None = None + + +@dataclass(frozen=True, kw_only=True) +class TDatacubeStructure: + dimensions: list[TDatacubeComponent] + measures: list[TDatacubeComponent] + + +@dataclass(frozen=True, kw_only=True) +class TMeasureData: + measures: list[TMeasureArray] | None = None + points: list[TTupleData] | None = None + + +@dataclass(frozen=True, kw_only=True) +class TDimensionData: + dimensions: list[TDimensionArray | TFunction] + + +@dataclass(frozen=True, kw_only=True) +class TDatacubeData(TDimensionData, TMeasureData): + pass + + +@dataclass(frozen=True, kw_only=True) +class TDatacube: + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + data: TDatacubeData | None = None + label: str | None = None diff --git a/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/hierarchy.py b/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/hierarchy.py new file mode 100644 index 0000000000..070f4c2e28 --- /dev/null +++ b/src/allotropy/allotrope/models/adm/core/rec/_2026/_03/hierarchy.py @@ -0,0 +1,900 @@ +# generated by allotropy.schema_gen + +from __future__ import annotations + +from dataclasses import dataclass, field +from enum import Enum +from typing import Any + +from allotropy.allotrope.models.adm.core.rec._2026._03.core import ( + OrderedItem, + TDateTimeStampValue, + TDateTimeValue, + TDoubleValue, + TIntegerValue, + TQuantityValue, + TStringValue, +) +from allotropy.allotrope.models.adm.core.rec._2026._03.cube import ( + TDatacube, + TDatacubeStructure, +) +from allotropy.allotrope.models.shared.definitions.quantity_values import ( + TQuantityValueMinuteTime, + TQuantityValueSecondTime, +) + + +@dataclass(frozen=True, kw_only=True) +class CustomInformationDocumentItem(OrderedItem): + datum_label: TStringValue + + +@dataclass(frozen=True, kw_only=True) +class DataCube(TDatacube): + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + + +@dataclass(frozen=True, kw_only=True) +class DataProcessingDocument: + data_processing_time: TDateTimeStampValue | None = None + data_processing_type: TStringValue | None = None + method_identifier: TStringValue | None = None + method_name: TStringValue | None = None + method_version: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DataSourceDocumentItem(OrderedItem): + data_source_identifier: TStringValue + data_source_feature: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ElectronicProjectRecord: + written_name: TStringValue + description: Any | None = None + start_time: TDateTimeValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ElectronicSignatureDocumentItem(OrderedItem): + account_identifier: TStringValue + personal_name: TStringValue + signature_role_type: TStringValue + time: TStringValue + identifier: TStringValue | None = None + measurement_identifier: TStringValue | None = None + method_identifier: TStringValue | None = None + processed_data_identifier: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ErrorDocumentItem: + error: TStringValue + error_feature: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ImageDocumentItem: + experimental_data_identifier: TStringValue | None = None + index: TIntegerValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class MatchQualityIndexDocumentItem: + match_quality_index: TDoubleValue + algorithm_name: TStringValue | None = None + description: TStringValue | None = None + lower_limit: TDoubleValue | None = None + upper_limit: TDoubleValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ParameterDocumentItem: + parameter_datum: TQuantityValue + parameter_identifier: TStringValue + written_name: TStringValue | None = None + + +class RegressionFeature(Enum): + bet_c_constant = "BET C constant" + raman_intensity = "Raman intensity" + raman_interferogram_intensity = "Raman interferogram intensity" + raman_wavenumber_shift = "Raman wavenumber shift" + young_modulus = "Young modulus" + abrasion_weight = "abrasion weight" + absolute_intensity = "absolute intensity" + absolute_water_content = "absolute water content" + absorbance = "absorbance" + acquisition_volume = "acquisition volume" + actual_p_p0_result = "actual P/P0 result" + adsorbed_volume_at_stp = "adsorbed volume at STP" + ambient_humidity = "ambient humidity" + ambient_pressure = "ambient pressure" + ambient_temperature = "ambient temperature" + amount_of_substance = "amount of substance" + angle = "angle" + angle_of_optical_rotation = "angle of optical rotation" + angular_velocity = "angular velocity" + area = "area" + attenuation_coefficient = "attenuation coefficient" + average_dead_cell_diameter__cell_counter_ = ( + "average dead cell diameter (cell counter)" + ) + average_particle_size = "average particle size" + average_total_cell_circularity = "average total cell circularity" + average_total_cell_diameter = "average total cell diameter" + average_viable_cell_circularity = "average viable cell circularity" + background_corrected_turbidity = "background corrected turbidity" + birefringence = "birefringence" + break_strain = "break strain" + break_stress = "break stress" + cell_path_length = "cell path length" + chemical_shift = "chemical shift" + chromatography_column_film_thickness = "chromatography column film thickness" + chromatography_column_length = "chromatography column length" + chromatography_column_particle_size = "chromatography column particle size" + circularity = "circularity" + coating_gap_height = "coating gap height" + collision_energy = "collision energy" + column_inner_diameter = "column inner diameter" + compartment_temperature = "compartment temperature" + concentration = "concentration" + container_diameter = "container diameter" + container_height = "container height" + degassed_sample_weight = "degassed sample weight" + detector_view_volume = "detector view volume" + diameter = "diameter" + dielectric_polarization = "dielectric polarization" + dilution_factor = "dilution factor" + dilution_volume = "dilution volume" + dispensed_volume = "dispensed volume" + dry_gas_flow_rate = "dry gas flow rate" + dry_sample_weight = "dry sample weight" + eccentricity = "eccentricity" + electric_charge = "electric charge" + electric_conductance = "electric conductance" + electric_conductivity = "electric conductivity" + electric_current = "electric current" + electric_impedance = "electric impedance" + electric_resistance = "electric resistance" + electric_resistivity = "electric resistivity" + electron_beam_working_distance = "electron beam working distance" + end_height = "end height" + energy__datum_ = "energy (datum)" + enthalpy = "enthalpy" + enthalpy_of_fusion = "enthalpy of fusion" + enthalpy_of_sublimation = "enthalpy of sublimation" + enthalpy_of_vaporization = "enthalpy of vaporization" + exhaust_gas_flow_rate = "exhaust gas flow rate" + extrapolated_moisture_content = "extrapolated moisture content" + fill_depth = "fill depth" + flow_rate = "flow rate" + flow_ratio = "flow ratio" + fluorescence = "fluorescence" + foam_height = "foam height" + force = "force" + fracture_energy = "fracture energy" + glass_transition_temperature = "glass transition temperature" + gloss = "gloss" + gross_weight = "gross weight" + hardness = "hardness" + heat_capacity = "heat capacity" + heat_capacity__dsc_ = "heat capacity (dsc)" + heat_flow = "heat flow" + heat_seal_length = "heat seal length" + heat_transfer_coefficient = "heat transfer coefficient" + height = "height" + hold_up_volume = "hold-up volume" + humidity = "humidity" + image_height = "image height" + image_width = "image width" + incident_radiation_angle = "incident radiation angle" + inlet_gas_pressure = "inlet gas pressure" + inner_diameter = "inner diameter" + intensity = "intensity" + isocyanate_reservoir_temperature = "isocyanate reservoir temperature" + length = "length" + linear_velocity = "linear velocity" + liquid_height = "liquid height" + luminescence = "luminescence" + m_z = "m/z" + mass = "mass" + mass_attenuation_coefficient = "mass attenuation coefficient" + mass_change = "mass change" + mass_concentration = "mass concentration" + mass_fraction = "mass fraction" + measurement_chamber_free_space_volume = "measurement chamber free space volume" + molar_attenuation_coefficient = "molar attenuation coefficient" + molar_concentration = "molar concentration" + molar_enthalpy_of_fusion = "molar enthalpy of fusion" + molar_enthalpy_of_sublimation = "molar enthalpy of sublimation" + molar_enthalpy_of_vaporization = "molar enthalpy of vaporization" + molar_mass = "molar mass" + molecular_mass = "molecular mass" + monolayer_quantity = "monolayer quantity" + normalized_foam_height = "normalized foam height" + number_concentration = "number concentration" + osmolality = "osmolality" + p_co2 = "pCO2" + p_co2__bga_ = "pCO2 (bga)" + p_h = "pH" + p_o2 = "pO2" + p_o2__bga_ = "pO2 (bga)" + partial_pressure = "partial pressure" + particle_size = "particle size" + peak_analyte_amount = "peak analyte amount" + peak_load_force = "peak load force" + peak_onset_temperature = "peak onset temperature" + peak_temperature = "peak temperature" + plate_heater_temperature = "plate heater temperature" + plate_temperature = "plate temperature" + plate_well_count = "plate well count" + polarity = "polarity" + polyol_reservoir_temperature = "polyol reservoir temperature" + position_count = "position count" + power = "power" + pressure = "pressure" + probe_volume = "probe volume" + protein_attenuation_coefficient = "protein attenuation coefficient" + purity = "purity" + q_nmr_purity_result = "qNMR purity result" + reference_material_weight = "reference material weight" + reflectance = "reflectance" + refractive_index = "refractive index" + relative_humidity = "relative humidity" + relative_intensity = "relative intensity" + relative_permittivity = "relative permittivity" + relative_pressure__bet_ = "relative pressure (BET)" + relative_response = "relative response" + relative_weight_loss_on_drying = "relative weight loss on drying" + reservoir_temperature = "reservoir temperature" + rotational_speed = "rotational speed" + sample_temperature = "sample temperature" + sample_thickness = "sample thickness" + sample_weight = "sample weight" + sample_weight_before_drying = "sample weight before drying" + sample_width = "sample width" + saturated_gas_flow_rate = "saturated gas flow rate" + saturation_vapor_pressure = "saturation vapor pressure" + seal_initiation_temperature = "seal initiation temperature" + size__datum_ = "size (datum)" + solvent_reservoir_temperature = "solvent reservoir temperature" + specific_enthalpy_of_fusion = "specific enthalpy of fusion" + specific_enthalpy_of_sublimation = "specific enthalpy of sublimation" + specific_enthalpy_of_vaporization = "specific enthalpy of vaporization" + specific_heat_capacity = "specific heat capacity" + specific_rotation = "specific rotation" + specific_surface_area = "specific surface area" + start_height = "start height" + stirring_rate = "stirring rate" + strain = "strain" + stress = "stress" + tablet_thickness = "tablet thickness" + tare_weight = "tare weight" + temperature = "temperature" + temperature_rate = "temperature rate" + thermal_conductance = "thermal conductance" + thermal_conductivity = "thermal conductivity" + thickness = "thickness" + titer = "titer" + torque = "torque" + total_cell_diameter = "total cell diameter" + total_foam_height = "total foam height" + total_gas_flow_rate = "total gas flow rate" + total_material_height = "total material height" + transition_enthalpy = "transition enthalpy" + transmittance = "transmittance" + turbidity = "turbidity" + velocity = "velocity" + viscosity = "viscosity" + void_volume = "void volume" + voltage = "voltage" + voltage_range = "voltage range" + volume = "volume" + volume_concentration = "volume concentration" + volume_fraction = "volume fraction" + water_mass_concentration = "water mass concentration" + water_mass_fraction = "water mass fraction" + wavelength = "wavelength" + wavenumber = "wavenumber" + weight_loss = "weight loss" + well_volume = "well volume" + width = "width" + yield_strain = "yield strain" + yield_stress = "yield stress" + + +class SampleRoleType(Enum): + control_sample_role = "control sample role" + standard_sample_role = "standard sample role" + validation_sample_role = "validation sample role" + experiment_sample_role = "experiment sample role" + sample_role = "sample role" + spiked_sample_role = "spiked sample role" + blank_role = "blank role" + unknown_sample_role = "unknown sample role" + calibration_sample_role = "calibration sample role" + unspiked_sample_role = "unspiked sample role" + specimen_role = "specimen role" + quality_control_sample_role = "quality control sample role" + reference_sample_role = "reference sample role" + + +class StatisticalFeature(Enum): + bet_c_constant = "BET C constant" + raman_intensity = "Raman intensity" + raman_interferogram_intensity = "Raman interferogram intensity" + raman_wavenumber_shift = "Raman wavenumber shift" + young_modulus = "Young modulus" + abrasion_weight = "abrasion weight" + absolute_intensity = "absolute intensity" + absolute_water_content = "absolute water content" + absorbance = "absorbance" + acquisition_volume = "acquisition volume" + actual_p_p0_result = "actual P/P0 result" + adsorbed_volume_at_stp = "adsorbed volume at STP" + ambient_humidity = "ambient humidity" + ambient_pressure = "ambient pressure" + ambient_temperature = "ambient temperature" + amount_of_substance = "amount of substance" + angle = "angle" + angle_of_optical_rotation = "angle of optical rotation" + angular_velocity = "angular velocity" + area = "area" + attenuation_coefficient = "attenuation coefficient" + average_dead_cell_diameter__cell_counter_ = ( + "average dead cell diameter (cell counter)" + ) + average_particle_size = "average particle size" + average_total_cell_circularity = "average total cell circularity" + average_total_cell_diameter = "average total cell diameter" + average_viable_cell_circularity = "average viable cell circularity" + background_corrected_turbidity = "background corrected turbidity" + birefringence = "birefringence" + break_strain = "break strain" + break_stress = "break stress" + cell_path_length = "cell path length" + chemical_shift = "chemical shift" + chromatography_column_film_thickness = "chromatography column film thickness" + chromatography_column_length = "chromatography column length" + chromatography_column_particle_size = "chromatography column particle size" + circularity = "circularity" + coating_gap_height = "coating gap height" + collision_energy = "collision energy" + column_inner_diameter = "column inner diameter" + compartment_temperature = "compartment temperature" + concentration = "concentration" + container_diameter = "container diameter" + container_height = "container height" + degassed_sample_weight = "degassed sample weight" + detector_view_volume = "detector view volume" + diameter = "diameter" + dielectric_polarization = "dielectric polarization" + dilution_factor = "dilution factor" + dilution_volume = "dilution volume" + dispensed_volume = "dispensed volume" + dry_gas_flow_rate = "dry gas flow rate" + dry_sample_weight = "dry sample weight" + eccentricity = "eccentricity" + electric_charge = "electric charge" + electric_conductance = "electric conductance" + electric_conductivity = "electric conductivity" + electric_current = "electric current" + electric_impedance = "electric impedance" + electric_resistance = "electric resistance" + electric_resistivity = "electric resistivity" + electron_beam_working_distance = "electron beam working distance" + end_height = "end height" + energy__datum_ = "energy (datum)" + enthalpy = "enthalpy" + enthalpy_of_fusion = "enthalpy of fusion" + enthalpy_of_sublimation = "enthalpy of sublimation" + enthalpy_of_vaporization = "enthalpy of vaporization" + exhaust_gas_flow_rate = "exhaust gas flow rate" + extrapolated_moisture_content = "extrapolated moisture content" + fill_depth = "fill depth" + flow_rate = "flow rate" + flow_ratio = "flow ratio" + fluorescence = "fluorescence" + foam_height = "foam height" + force = "force" + fracture_energy = "fracture energy" + glass_transition_temperature = "glass transition temperature" + gloss = "gloss" + gross_weight = "gross weight" + hardness = "hardness" + heat_capacity = "heat capacity" + heat_capacity__dsc_ = "heat capacity (dsc)" + heat_flow = "heat flow" + heat_seal_length = "heat seal length" + heat_transfer_coefficient = "heat transfer coefficient" + height = "height" + hold_up_volume = "hold-up volume" + humidity = "humidity" + image_height = "image height" + image_width = "image width" + incident_radiation_angle = "incident radiation angle" + inlet_gas_pressure = "inlet gas pressure" + inner_diameter = "inner diameter" + intensity = "intensity" + isocyanate_reservoir_temperature = "isocyanate reservoir temperature" + length = "length" + linear_velocity = "linear velocity" + liquid_height = "liquid height" + luminescence = "luminescence" + m_z = "m/z" + mass = "mass" + mass_attenuation_coefficient = "mass attenuation coefficient" + mass_change = "mass change" + mass_concentration = "mass concentration" + mass_fraction = "mass fraction" + measurement_chamber_free_space_volume = "measurement chamber free space volume" + molar_attenuation_coefficient = "molar attenuation coefficient" + molar_concentration = "molar concentration" + molar_enthalpy_of_fusion = "molar enthalpy of fusion" + molar_enthalpy_of_sublimation = "molar enthalpy of sublimation" + molar_enthalpy_of_vaporization = "molar enthalpy of vaporization" + molar_mass = "molar mass" + molecular_mass = "molecular mass" + monolayer_quantity = "monolayer quantity" + normalized_foam_height = "normalized foam height" + number_concentration = "number concentration" + osmolality = "osmolality" + p_co2 = "pCO2" + p_co2__bga_ = "pCO2 (bga)" + p_h = "pH" + p_o2 = "pO2" + p_o2__bga_ = "pO2 (bga)" + partial_pressure = "partial pressure" + particle_size = "particle size" + peak_analyte_amount = "peak analyte amount" + peak_load_force = "peak load force" + peak_onset_temperature = "peak onset temperature" + peak_temperature = "peak temperature" + plate_heater_temperature = "plate heater temperature" + plate_temperature = "plate temperature" + plate_well_count = "plate well count" + polarity = "polarity" + polyol_reservoir_temperature = "polyol reservoir temperature" + position_count = "position count" + power = "power" + pressure = "pressure" + probe_volume = "probe volume" + protein_attenuation_coefficient = "protein attenuation coefficient" + purity = "purity" + q_nmr_purity_result = "qNMR purity result" + reference_material_weight = "reference material weight" + reflectance = "reflectance" + refractive_index = "refractive index" + relative_humidity = "relative humidity" + relative_intensity = "relative intensity" + relative_permittivity = "relative permittivity" + relative_pressure__bet_ = "relative pressure (BET)" + relative_response = "relative response" + relative_weight_loss_on_drying = "relative weight loss on drying" + reservoir_temperature = "reservoir temperature" + rotational_speed = "rotational speed" + sample_temperature = "sample temperature" + sample_thickness = "sample thickness" + sample_weight = "sample weight" + sample_weight_before_drying = "sample weight before drying" + sample_width = "sample width" + saturated_gas_flow_rate = "saturated gas flow rate" + saturation_vapor_pressure = "saturation vapor pressure" + seal_initiation_temperature = "seal initiation temperature" + size__datum_ = "size (datum)" + solvent_reservoir_temperature = "solvent reservoir temperature" + specific_enthalpy_of_fusion = "specific enthalpy of fusion" + specific_enthalpy_of_sublimation = "specific enthalpy of sublimation" + specific_enthalpy_of_vaporization = "specific enthalpy of vaporization" + specific_heat_capacity = "specific heat capacity" + specific_rotation = "specific rotation" + specific_surface_area = "specific surface area" + start_height = "start height" + stirring_rate = "stirring rate" + strain = "strain" + stress = "stress" + tablet_thickness = "tablet thickness" + tare_weight = "tare weight" + temperature = "temperature" + temperature_rate = "temperature rate" + thermal_conductance = "thermal conductance" + thermal_conductivity = "thermal conductivity" + thickness = "thickness" + titer = "titer" + torque = "torque" + total_cell_diameter = "total cell diameter" + total_foam_height = "total foam height" + total_gas_flow_rate = "total gas flow rate" + total_material_height = "total material height" + transition_enthalpy = "transition enthalpy" + transmittance = "transmittance" + turbidity = "turbidity" + velocity = "velocity" + viscosity = "viscosity" + void_volume = "void volume" + voltage = "voltage" + voltage_range = "voltage range" + volume = "volume" + volume_concentration = "volume concentration" + volume_fraction = "volume fraction" + water_mass_concentration = "water mass concentration" + water_mass_fraction = "water mass fraction" + wavelength = "wavelength" + wavenumber = "wavenumber" + weight_loss = "weight loss" + well_volume = "well volume" + width = "width" + yield_strain = "yield strain" + yield_stress = "yield stress" + + +@dataclass(frozen=True, kw_only=True) +class SynonymDocumentItem: + written_name: TStringValue + + +@dataclass(frozen=True, kw_only=True) +class CustomInformationAggregateDocument: + custom_information_document: list[CustomInformationDocumentItem] + + +@dataclass(frozen=True, kw_only=True) +class DataSourceAggregateDocument: + data_source_document: list[DataSourceDocumentItem] + + +@dataclass(frozen=True, kw_only=True) +class ElectronicSignatureAggregateDocument: + electronic_signature_document: list[ElectronicSignatureDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class ErrorAggregateDocument: + error_document: list[ErrorDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class ImageAggregateDocument: + image_document: list[ImageDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class MatchQualityIndexAggregateDocument: + match_quality_index_document: list[MatchQualityIndexDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class ParameterAggregateDocument: + parameter_document: list[ParameterDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class RegressionPointDocumentItem: + regression_feature: RegressionFeature + standard_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class StatisticsDocumentItem: + statistical_feature: StatisticalFeature + + +@dataclass(frozen=True, kw_only=True) +class SynonymAggregateDocument: + synonym_document: list[SynonymDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class AnalysisSequenceDocument: + written_name: TStringValue + unc_path: TStringValue | None = field( + default=None, metadata={"json_name": "UNC path"} + ) + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + end_time: TDateTimeValue | None = None + file_name: TStringValue | None = None + identifier: TStringValue | None = None + method_identifier: TStringValue | None = None + method_name: TStringValue | None = None + start_time: TDateTimeValue | None = None + version_number: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DataSystemDocument: + asm_file_identifier: TStringValue = field( + metadata={"json_name": "ASM file identifier"} + ) + data_system_instance_identifier: TStringValue + asm_conversion_time: TDateTimeValue | None = field( + default=None, metadata={"json_name": "ASM conversion time"} + ) + asm_converter_name: TStringValue | None = field( + default=None, metadata={"json_name": "ASM converter name"} + ) + asm_converter_version: TStringValue | None = field( + default=None, metadata={"json_name": "ASM converter version"} + ) + unc_path: TStringValue | None = field( + default=None, metadata={"json_name": "UNC path"} + ) + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + database_primary_key: TStringValue | None = None + file_name: TStringValue | None = None + software_name: TStringValue | None = None + software_version: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DeviceControlDocumentItem(OrderedItem): + device_type: TStringValue + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + detection_type: TStringValue | None = None + device_identifier: TStringValue | None = None + duration_setting: TQuantityValueSecondTime | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DeviceDocumentItem(OrderedItem): + device_type: TStringValue + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + device_identifier: TStringValue | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + written_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DiagnosticTraceDocumentItem: + description: Any + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + + +@dataclass(frozen=True, kw_only=True) +class LogEntryItem: + observation: TStringValue + scalar_timestamp_datum: TDateTimeValue + author: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + elapsed_time: TQuantityValueMinuteTime | None = None + identifier: TStringValue | None = None + log_source_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class SampleDocument: + sample_identifier: TStringValue + batch_identifier: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + description: Any | None = None + location_identifier: TStringValue | None = None + sample_role_type: SampleRoleType | None = None + written_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class CalculatedDataDocumentItem(OrderedItem): + calculated_data_name: TStringValue + calculated_result: TQuantityValue + calculated_data_identifier: TStringValue | None = None + calculation_description: TStringValue | None = None + data_source_aggregate_document: DataSourceAggregateDocument | None = None + electronic_project_record: ElectronicProjectRecord | None = None + + +@dataclass(frozen=True, kw_only=True) +class RegressionPointAggregateDocument: + regression_point_document: list[RegressionPointDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class StatisticsAggregateDocument: + statistics_document: list[StatisticsDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class MatchResultDocumentItem: + in_ch_i_molecular_structure: TStringValue | None = field( + default=None, metadata={"json_name": "InChI molecular structure"} + ) + in_ch_ikey_molecular_structure: TStringValue | None = field( + default=None, metadata={"json_name": "InChIKey molecular structure"} + ) + molfile_molecular_structure: TStringValue | None = field( + default=None, metadata={"json_name": "Molfile molecular structure"} + ) + smiles_molecular_structure: TStringValue | None = field( + default=None, metadata={"json_name": "SMILES molecular structure"} + ) + database_identifier: TStringValue | None = None + description: TStringValue | None = None + fingerprint_identifier: TStringValue | None = None + match_quality_index_aggregate_document: MatchQualityIndexAggregateDocument | None = ( + None + ) + molecular_formula: TStringValue | None = None + reference_identifier: TStringValue | None = None + synonym_aggregate_document: SynonymAggregateDocument | None = None + + +@dataclass(frozen=True, kw_only=True) +class DeviceControlAggregateDocument: + device_control_document: list[DeviceControlDocumentItem] + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + + +@dataclass(frozen=True, kw_only=True) +class DeviceSystemDocument: + asset_management_identifier: TStringValue | None = None + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + description: Any | None = None + device_document: list[DeviceDocumentItem] | None = None + device_identifier: TStringValue | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DiagnosticTraceAggregateDocument: + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + diagnostic_trace_document: list[DiagnosticTraceDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class Log: + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + log_entry: list[LogEntryItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class CalculatedDataAggregateDocument: + calculated_data_document: list[CalculatedDataDocumentItem] + + +@dataclass(frozen=True, kw_only=True) +class RegressionDocumentItem: + data_cube: DataCube | None = None + data_source_aggregate_document: DataSourceAggregateDocument | None = None + description: TStringValue | None = None + parameter_aggregate_document: ParameterAggregateDocument | None = None + regression_equation: TStringValue | None = None + regression_identifier: TStringValue | None = None + regression_point_aggregate_document: RegressionPointAggregateDocument | None = None + regression_type: TStringValue | None = None + written_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class MatchResultAggregateDocument: + match_result_document: list[MatchResultDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class RegressionAggregateDocument: + regression_document: list[RegressionDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class ProcessedDataDocumentItem(OrderedItem): + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + data_processing_document: DataProcessingDocument | None = None + data_source_aggregate_document: DataSourceAggregateDocument | None = None + description: TStringValue | None = None + electronic_project_record: ElectronicProjectRecord | None = None + group_identifier: TStringValue | None = None + match_result_aggregate_document: MatchResultAggregateDocument | None = None + processed_data_identifier: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ProcessedDataAggregateDocument: + processed_data_document: list[ProcessedDataDocumentItem] + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + electronic_project_record: ElectronicProjectRecord | None = None + + +@dataclass(frozen=True, kw_only=True) +class MeasurementDocumentItem: + device_control_aggregate_document: DeviceControlAggregateDocument + sample_document: SampleDocument + analytical_method_identifier: TStringValue | None = None + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + detection_type: TStringValue | None = None + duration: TQuantityValueSecondTime | None = None + electronic_project_record: ElectronicProjectRecord | None = None + error_aggregate_document: ErrorAggregateDocument | None = None + experimental_data_identifier: TStringValue | None = None + image_aggregate_document: ImageAggregateDocument | None = None + measurement_identifier: TStringValue | None = None + measurement_time: TDateTimeStampValue | None = None + method_version: TStringValue | None = None + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + + +@dataclass(frozen=True, kw_only=True) +class TechniqueAggregateDocument: + analysis_sequence_document: AnalysisSequenceDocument | None = None + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + data_system_document: DataSystemDocument | None = None + device_system_document: DeviceSystemDocument | None = None + electronic_project_record: ElectronicProjectRecord | None = None + electronic_signature_aggregate_document: ElectronicSignatureAggregateDocument | None = ( + None + ) + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + + +@dataclass(frozen=True, kw_only=True) +class MeasurementAggregateDocument: + measurement_document: list[MeasurementDocumentItem] + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + diagnostic_trace_aggregate_document: DiagnosticTraceAggregateDocument | None = None + error_aggregate_document: ErrorAggregateDocument | None = None + image_aggregate_document: ImageAggregateDocument | None = None + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + + +@dataclass(frozen=True, kw_only=True) +class TechniqueDocument: + measurement_aggregate_document: MeasurementAggregateDocument + analyst: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + electronic_project_record: ElectronicProjectRecord | None = None + log: Log | None = None + submitter: TStringValue | None = None diff --git a/src/allotropy/allotrope/models/adm/pcr/rec/_2026/_03/dpcr.py b/src/allotropy/allotrope/models/adm/pcr/rec/_2026/_03/dpcr.py new file mode 100644 index 0000000000..342c538b99 --- /dev/null +++ b/src/allotropy/allotrope/models/adm/pcr/rec/_2026/_03/dpcr.py @@ -0,0 +1,270 @@ +# generated by allotropy.schema_gen + +from __future__ import annotations + +from dataclasses import dataclass, field +from enum import Enum +from typing import Any + +from allotropy.allotrope.models.adm.core.rec._2026._03.core import ( + OrderedItem, + TDateTimeStampValue, + TStringValue, +) +from allotropy.allotrope.models.adm.core.rec._2026._03.hierarchy import ( + CalculatedDataAggregateDocument, + CustomInformationAggregateDocument, + DataSourceAggregateDocument, + ElectronicProjectRecord, + ErrorAggregateDocument, + ImageAggregateDocument, + MatchResultAggregateDocument, + StatisticsAggregateDocument, + TechniqueAggregateDocument, + TechniqueDocument, +) +from allotropy.allotrope.models.shared.definitions.quantity_values import ( + TQuantityValueCountsPerMicroliter, + TQuantityValueDegreeCelsius, + TQuantityValueMicroliter, + TQuantityValueNumber, + TQuantityValueRelativeFluorescenceUnit, + TQuantityValueSecondTime, + TQuantityValueUnitless, +) + + +class ContainerType(Enum): + reactor = "reactor" + controlled_lab_reactor = "controlled lab reactor" + tube = "tube" + well_plate = "well plate" + differential_scanning_calorimetry_pan = "differential scanning calorimetry pan" + pcr_reaction_block = "PCR reaction block" + vial_rack = "vial rack" + pan = "pan" + reservoir = "reservoir" + array_card_block = "array card block" + capillary = "capillary" + disintegration_apparatus_basket = "disintegration apparatus basket" + jar = "jar" + container = "container" + tray = "tray" + basket = "basket" + cell_holder = "cell holder" + + +@dataclass(frozen=True, kw_only=True) +class DataProcessingDocument: + data_processing_time: TDateTimeStampValue | None = None + data_processing_type: TStringValue | None = None + method_identifier: TStringValue | None = None + method_name: TStringValue | None = None + method_version: TStringValue | None = None + fluorescence_intensity_threshold_setting: TQuantityValueRelativeFluorescenceUnit | None = ( + None + ) + + +@dataclass(frozen=True, kw_only=True) +class DeviceControlDocumentItem(OrderedItem): + device_type: TStringValue + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + detection_type: TStringValue | None = None + device_identifier: TStringValue | None = None + duration_setting: TQuantityValueSecondTime | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + pcr_detection_chemistry: TStringValue | None = field( + default=None, metadata={"json_name": "PCR detection chemistry"} + ) + annealing_duration_setting: TQuantityValueSecondTime | None = None + annealing_temperature_setting: TQuantityValueDegreeCelsius | None = None + denaturing_duration_setting: TQuantityValueSecondTime | None = None + denaturing_temperature_setting: TQuantityValueDegreeCelsius | None = None + measurement_method_identifier: TStringValue | None = None + passive_reference_dye_setting: TStringValue | None = None + primer_extension_duration_setting: TQuantityValueSecondTime | None = None + primer_extension_temperature_setting: TQuantityValueDegreeCelsius | None = None + quencher_dye_setting: TStringValue | None = None + reporter_dye_setting: TStringValue | None = None + total_cycle_number_setting: TQuantityValueUnitless | None = None + + +@dataclass(frozen=True, kw_only=True) +class DeviceDocumentItem(OrderedItem): + device_type: TStringValue + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + device_identifier: TStringValue | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + written_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DiagnosticTraceDocumentItem: + description: Any + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + + +class SampleRoleType(Enum): + control_sample_role = "control sample role" + standard_sample_role = "standard sample role" + validation_sample_role = "validation sample role" + experiment_sample_role = "experiment sample role" + sample_role = "sample role" + spiked_sample_role = "spiked sample role" + blank_role = "blank role" + unknown_sample_role = "unknown sample role" + calibration_sample_role = "calibration sample role" + unspiked_sample_role = "unspiked sample role" + specimen_role = "specimen role" + quality_control_sample_role = "quality control sample role" + reference_sample_role = "reference sample role" + + +@dataclass(frozen=True, kw_only=True) +class ProcessedDataDocumentItem(OrderedItem): + number_concentration: TQuantityValueCountsPerMicroliter + positive_partition_count: TQuantityValueUnitless + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + data_processing_document: DataProcessingDocument | None = None + data_source_aggregate_document: DataSourceAggregateDocument | None = None + description: TStringValue | None = None + electronic_project_record: ElectronicProjectRecord | None = None + group_identifier: TStringValue | None = None + match_result_aggregate_document: MatchResultAggregateDocument | None = None + processed_data_identifier: TStringValue | None = None + negative_partition_count: TQuantityValueUnitless | None = None + + +@dataclass(frozen=True, kw_only=True) +class DeviceControlAggregateDocument: + device_control_document: list[DeviceControlDocumentItem] + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + + +@dataclass(frozen=True, kw_only=True) +class DeviceSystemDocument: + model_number: TStringValue + asset_management_identifier: TStringValue | None = None + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + description: Any | None = None + device_document: list[DeviceDocumentItem] | None = None + device_identifier: TStringValue | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + product_manufacturer: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DiagnosticTraceAggregateDocument: + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + diagnostic_trace_document: list[DiagnosticTraceDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class SampleDocument: + location_identifier: TStringValue + sample_identifier: TStringValue + batch_identifier: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + description: Any | None = None + sample_role_type: SampleRoleType | None = None + written_name: TStringValue | None = None + vial_location_identifier: TStringValue | None = None + well_location_identifier: TStringValue | None = None + well_plate_identifier: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ProcessedDataAggregateDocument: + processed_data_document: list[ProcessedDataDocumentItem] + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + electronic_project_record: ElectronicProjectRecord | None = None + + +@dataclass(frozen=True, kw_only=True) +class MeasurementDocumentItem: + device_control_aggregate_document: DeviceControlAggregateDocument + measurement_identifier: TStringValue + measurement_time: TDateTimeStampValue + sample_document: SampleDocument + total_partition_count: TQuantityValueUnitless + analytical_method_identifier: TStringValue | None = None + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + detection_type: TStringValue | None = None + duration: TQuantityValueSecondTime | None = None + electronic_project_record: ElectronicProjectRecord | None = None + error_aggregate_document: ErrorAggregateDocument | None = None + experimental_data_identifier: TStringValue | None = None + image_aggregate_document: ImageAggregateDocument | None = None + method_version: TStringValue | None = None + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + target_dna_description: TStringValue | None = field( + default=None, metadata={"json_name": "target DNA description"} + ) + + +@dataclass(frozen=True, kw_only=True) +class MeasurementAggregateDocument: + measurement_document: list[MeasurementDocumentItem] + experiment_type: TStringValue + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + diagnostic_trace_aggregate_document: DiagnosticTraceAggregateDocument | None = None + error_aggregate_document: ErrorAggregateDocument | None = None + image_aggregate_document: ImageAggregateDocument | None = None + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + container_type: ContainerType | None = None + plate_well_count: TQuantityValueNumber | None = None + well_volume: TQuantityValueMicroliter | None = None + + +@dataclass(frozen=True, kw_only=True) +class PcrDocumentItem(TechniqueDocument): + measurement_aggregate_document: MeasurementAggregateDocument | None = None + + +@dataclass(frozen=True, kw_only=True) +class PcrAggregateDocument(TechniqueAggregateDocument): + pcr_document: list[PcrDocumentItem] + device_system_document: DeviceSystemDocument | None = None + + +@dataclass(kw_only=True) +class Model: + field_asm_manifest: str = field(metadata={"json_name": "$asm.manifest"}) + pcr_aggregate_document: PcrAggregateDocument | None = None diff --git a/src/allotropy/allotrope/models/adm/pcr/rec/_2026/_03/qpcr.py b/src/allotropy/allotrope/models/adm/pcr/rec/_2026/_03/qpcr.py new file mode 100644 index 0000000000..8cf5de76fd --- /dev/null +++ b/src/allotropy/allotrope/models/adm/pcr/rec/_2026/_03/qpcr.py @@ -0,0 +1,332 @@ +# generated by allotropy.schema_gen + +from __future__ import annotations + +from dataclasses import dataclass, field +from enum import Enum +from typing import Any + +from allotropy.allotrope.models.adm.core.rec._2026._03.core import ( + OrderedItem, + TBooleanValue, + TDateTimeStampValue, + TStringValue, +) +from allotropy.allotrope.models.adm.core.rec._2026._03.cube import ( + TDatacube, + TDatacubeStructure, +) +from allotropy.allotrope.models.adm.core.rec._2026._03.hierarchy import ( + CalculatedDataAggregateDocument, + CustomInformationAggregateDocument, + DataSourceAggregateDocument, + ElectronicProjectRecord, + ErrorAggregateDocument, + ImageAggregateDocument, + MatchResultAggregateDocument, + StatisticsAggregateDocument, + TechniqueAggregateDocument, + TechniqueDocument, +) +from allotropy.allotrope.models.shared.definitions.quantity_values import ( + TQuantityValueDegreeCelsius, + TQuantityValueMicroliter, + TQuantityValueNumber, + TQuantityValuePicogramPerMilliliter, + TQuantityValueSecondTime, + TQuantityValueUnitless, +) + + +@dataclass(frozen=True, kw_only=True) +class BaselineCorrectedReporterDataCube(TDatacube): + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + + +class ContainerType(Enum): + reactor = "reactor" + controlled_lab_reactor = "controlled lab reactor" + tube = "tube" + well_plate = "well plate" + differential_scanning_calorimetry_pan = "differential scanning calorimetry pan" + pcr_reaction_block = "PCR reaction block" + vial_rack = "vial rack" + pan = "pan" + reservoir = "reservoir" + array_card_block = "array card block" + capillary = "capillary" + disintegration_apparatus_basket = "disintegration apparatus basket" + jar = "jar" + container = "container" + tray = "tray" + basket = "basket" + cell_holder = "cell holder" + + +@dataclass(frozen=True, kw_only=True) +class DataProcessingDocument: + data_processing_time: TDateTimeStampValue | None = None + data_processing_type: TStringValue | None = None + method_identifier: TStringValue | None = None + method_name: TStringValue | None = None + method_version: TStringValue | None = None + automatic_baseline_determination_enabled_setting: TBooleanValue | None = None + automatic_cycle_threshold_enabled_setting: TBooleanValue | None = None + baseline_determination_end_cycle_setting: TQuantityValueNumber | None = None + baseline_determination_start_cycle_setting: TQuantityValueNumber | None = None + cycle_threshold_value_setting__q_pcr_: TQuantityValueUnitless | None = field( + default=None, metadata={"json_name": "cycle threshold value setting (qPCR)"} + ) + genotyping_q_pcr_method_identifier: TStringValue | None = field( + default=None, metadata={"json_name": "genotyping qPCR method identifier"} + ) + genotyping_q_pcr_method_setting__q_pcr_: TQuantityValueUnitless | None = field( + default=None, metadata={"json_name": "genotyping qPCR method setting (qPCR)"} + ) + + +@dataclass(frozen=True, kw_only=True) +class DeviceControlDocumentItem(OrderedItem): + device_type: TStringValue + measurement_method_identifier: TStringValue + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + detection_type: TStringValue | None = None + device_identifier: TStringValue | None = None + duration_setting: TQuantityValueSecondTime | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + annealing_duration_setting: TQuantityValueSecondTime | None = None + annealing_temperature_setting: TQuantityValueDegreeCelsius | None = None + denaturing_duration_setting: TQuantityValueSecondTime | None = None + denaturing_temperature_setting: TQuantityValueDegreeCelsius | None = None + passive_reference_dye_setting: TStringValue | None = None + primer_extension_duration_setting: TQuantityValueSecondTime | None = None + primer_extension_temperature_setting: TQuantityValueDegreeCelsius | None = None + q_pcr_detection_chemistry: TStringValue | None = field( + default=None, metadata={"json_name": "qPCR detection chemistry"} + ) + quencher_dye_setting: TStringValue | None = None + reporter_dye_setting: TStringValue | None = None + total_cycle_number_setting: TQuantityValueUnitless | None = None + + +@dataclass(frozen=True, kw_only=True) +class DeviceDocumentItem(OrderedItem): + device_type: TStringValue + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + device_identifier: TStringValue | None = None + equipment_serial_number: TStringValue | None = None + firmware_version: TStringValue | None = None + model_number: TStringValue | None = None + product_manufacturer: TStringValue | None = None + written_name: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DiagnosticTraceDocumentItem: + description: Any + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + + +@dataclass(frozen=True, kw_only=True) +class MeltingCurveDataCube(TDatacube): + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + + +@dataclass(frozen=True, kw_only=True) +class NormalizedReporterDataCube(TDatacube): + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + + +@dataclass(frozen=True, kw_only=True) +class PassiveReferenceDataCube(TDatacube): + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + + +@dataclass(frozen=True, kw_only=True) +class ReporterDataCube(TDatacube): + cube_structure: TDatacubeStructure | None = field( + default=None, metadata={"json_name": "cube-structure"} + ) + + +class SampleRoleType(Enum): + control_sample_role = "control sample role" + standard_sample_role = "standard sample role" + validation_sample_role = "validation sample role" + experiment_sample_role = "experiment sample role" + sample_role = "sample role" + spiked_sample_role = "spiked sample role" + blank_role = "blank role" + unknown_sample_role = "unknown sample role" + calibration_sample_role = "calibration sample role" + unspiked_sample_role = "unspiked sample role" + specimen_role = "specimen role" + quality_control_sample_role = "quality control sample role" + reference_sample_role = "reference sample role" + + +@dataclass(frozen=True, kw_only=True) +class DeviceControlAggregateDocument: + device_control_document: list[DeviceControlDocumentItem] + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + + +@dataclass(frozen=True, kw_only=True) +class DeviceSystemDocument: + device_identifier: TStringValue + equipment_serial_number: TStringValue + model_number: TStringValue + asset_management_identifier: TStringValue | None = None + brand_name: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + description: Any | None = None + device_document: list[DeviceDocumentItem] | None = None + firmware_version: TStringValue | None = None + product_manufacturer: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class DiagnosticTraceAggregateDocument: + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + diagnostic_trace_document: list[DiagnosticTraceDocumentItem] | None = None + + +@dataclass(frozen=True, kw_only=True) +class ProcessedDataDocumentItem(OrderedItem): + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + data_processing_document: DataProcessingDocument | None = None + data_source_aggregate_document: DataSourceAggregateDocument | None = None + description: TStringValue | None = None + electronic_project_record: ElectronicProjectRecord | None = None + group_identifier: TStringValue | None = None + match_result_aggregate_document: MatchResultAggregateDocument | None = None + processed_data_identifier: TStringValue | None = None + baseline_corrected_reporter_data_cube: BaselineCorrectedReporterDataCube | None = ( + None + ) + baseline_corrected_reporter_result: TQuantityValueUnitless | None = None + cycle_threshold_result__q_pcr_: TQuantityValueUnitless | None = field( + default=None, metadata={"json_name": "cycle threshold result (qPCR)"} + ) + genotyping_q_pcr_result: TStringValue | None = field( + default=None, metadata={"json_name": "genotyping qPCR result"} + ) + normalized_reporter_data_cube: NormalizedReporterDataCube | None = None + normalized_reporter_result: TQuantityValueUnitless | None = None + + +@dataclass(frozen=True, kw_only=True) +class SampleDocument: + location_identifier: TStringValue + sample_identifier: TStringValue + batch_identifier: TStringValue | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + description: Any | None = None + sample_role_type: SampleRoleType | None = None + written_name: TStringValue | None = None + mass_concentration: TQuantityValuePicogramPerMilliliter | None = None + vial_location_identifier: TStringValue | None = None + well_location_identifier: TStringValue | None = None + well_plate_identifier: TStringValue | None = None + + +@dataclass(frozen=True, kw_only=True) +class ProcessedDataAggregateDocument: + processed_data_document: list[ProcessedDataDocumentItem] + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + electronic_project_record: ElectronicProjectRecord | None = None + + +@dataclass(frozen=True, kw_only=True) +class MeasurementDocumentItem: + device_control_aggregate_document: DeviceControlAggregateDocument + measurement_identifier: TStringValue + measurement_time: TDateTimeStampValue + sample_document: SampleDocument + analytical_method_identifier: TStringValue | None = None + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + detection_type: TStringValue | None = None + duration: TQuantityValueSecondTime | None = None + electronic_project_record: ElectronicProjectRecord | None = None + error_aggregate_document: ErrorAggregateDocument | None = None + experimental_data_identifier: TStringValue | None = None + image_aggregate_document: ImageAggregateDocument | None = None + method_version: TStringValue | None = None + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + melting_curve_data_cube: MeltingCurveDataCube | None = None + passive_reference_data_cube: PassiveReferenceDataCube | None = None + reporter_data_cube: ReporterDataCube | None = None + target_dna_description: TStringValue | None = field( + default=None, metadata={"json_name": "target DNA description"} + ) + + +@dataclass(frozen=True, kw_only=True) +class MeasurementAggregateDocument: + measurement_document: list[MeasurementDocumentItem] + container_type: ContainerType + experiment_type: TStringValue + experimental_data_identifier: TStringValue + well_volume: TQuantityValueMicroliter + calculated_data_aggregate_document: CalculatedDataAggregateDocument | None = None + custom_information_aggregate_document: CustomInformationAggregateDocument | None = ( + None + ) + diagnostic_trace_aggregate_document: DiagnosticTraceAggregateDocument | None = None + error_aggregate_document: ErrorAggregateDocument | None = None + image_aggregate_document: ImageAggregateDocument | None = None + processed_data_aggregate_document: ProcessedDataAggregateDocument | None = None + statistics_aggregate_document: StatisticsAggregateDocument | None = None + plate_well_count: TQuantityValueNumber | None = None + + +@dataclass(frozen=True, kw_only=True) +class QpcrDocumentItem(TechniqueDocument): + measurement_aggregate_document: MeasurementAggregateDocument | None = None + + +@dataclass(frozen=True, kw_only=True) +class QpcrAggregateDocument(TechniqueAggregateDocument): + qpcr_document: list[QpcrDocumentItem] + device_system_document: DeviceSystemDocument | None = None + + +@dataclass(kw_only=True) +class Model: + field_asm_manifest: str = field(metadata={"json_name": "$asm.manifest"}) + qpcr_aggregate_document: QpcrAggregateDocument | None = None diff --git a/src/allotropy/allotrope/models/shared/definitions/quantity_values.py b/src/allotropy/allotrope/models/shared/definitions/quantity_values.py index 7774737c45..6247829cd3 100644 --- a/src/allotropy/allotrope/models/shared/definitions/quantity_values.py +++ b/src/allotropy/allotrope/models/shared/definitions/quantity_values.py @@ -3575,11 +3575,21 @@ class TQuantityValueSquareMetersPerGram(TQuantityValue): unit: str = "m^2/g" +@dataclass(frozen=True, kw_only=True) +class TQuantityValueSquareMicrometer(TQuantityValue): + unit: str = "µm^2" + + @dataclass(frozen=True, kw_only=True) class TQuantityValueSquareMile(TQuantityValue): unit: str = "mi^2" +@dataclass(frozen=True, kw_only=True) +class TQuantityValueSquarePixel(TQuantityValue): + unit: str = "pixel^2" + + @dataclass(frozen=True, kw_only=True) class TQuantityValueSquareYard(TQuantityValue): unit: str = "yd^2" diff --git a/src/allotropy/allotrope/models/shared/definitions/units.py b/src/allotropy/allotrope/models/shared/definitions/units.py index 8ca74a89bb..2548692965 100644 --- a/src/allotropy/allotrope/models/shared/definitions/units.py +++ b/src/allotropy/allotrope/models/shared/definitions/units.py @@ -3584,11 +3584,21 @@ class SquareMetersPerGram(HasUnit): unit: str = "m^2/g" +@dataclass(frozen=True, kw_only=True) +class SquareMicrometer(HasUnit): + unit: str = "µm^2" + + @dataclass(frozen=True, kw_only=True) class SquareMile(HasUnit): unit: str = "mi^2" +@dataclass(frozen=True, kw_only=True) +class SquarePixel(HasUnit): + unit: str = "pixel^2" + + @dataclass(frozen=True, kw_only=True) class SquareYard(HasUnit): unit: str = "yd^2" diff --git a/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/_03/__init__.py b/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/_03/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/_03/qpcr.py b/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/_03/qpcr.py new file mode 100644 index 0000000000..317df34694 --- /dev/null +++ b/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/_03/qpcr.py @@ -0,0 +1,442 @@ +from dataclasses import dataclass +from enum import Enum +from typing import Any, TypeVar + +from allotropy.allotrope.converter import add_custom_information_document +from allotropy.allotrope.models.adm.core.rec._2026._03.hierarchy import ( + CalculatedDataAggregateDocument, + CalculatedDataDocumentItem, + DataSourceAggregateDocument, + DataSourceDocumentItem, + DataSystemDocument, + ErrorAggregateDocument, + ErrorDocumentItem, +) +from allotropy.allotrope.models.adm.pcr.rec._2026._03.qpcr import ( + BaselineCorrectedReporterDataCube, + ContainerType as ModelContainerType, + DataProcessingDocument, + DeviceControlAggregateDocument, + DeviceControlDocumentItem, + DeviceSystemDocument, + MeasurementAggregateDocument, + MeasurementDocumentItem, + MeltingCurveDataCube, + Model, + NormalizedReporterDataCube, + PassiveReferenceDataCube, + ProcessedDataAggregateDocument, + ProcessedDataDocumentItem, + QpcrAggregateDocument, + QpcrDocumentItem, + ReporterDataCube, + SampleDocument, + SampleRoleType as ModelSampleRoleType, +) +from allotropy.allotrope.models.shared.definitions.definitions import TQuantityValue +from allotropy.allotrope.models.shared.definitions.quantity_values import ( + TQuantityValueMicroliter, + TQuantityValueNumber, + TQuantityValueUnitless, +) +from allotropy.allotrope.schema_mappers.data_cube import DataCube, get_data_cube +from allotropy.allotrope.schema_mappers.schema_mapper import SchemaMapper +from allotropy.constants import ASM_CONVERTER_VERSION +from allotropy.parsers.utils.values import assert_not_none, quantity_or_none + + +# TODO: These Enumn should be autogenerated from the schema +class ContainerType(Enum): + reactor = "reactor" + controlled_lab_reactor = "controlled lab reactor" + tube = "tube" + well_plate = "well plate" + differential_scanning_calorimetry_pan = "differential scanning calorimetry pan" + PCR_reaction_block = "PCR reaction block" + vial_rack = "vial rack" + pan = "pan" + reservoir = "reservoir" + array_card_block = "array card block" + capillary = "capillary" + disintegration_apparatus_basket = "disintegration apparatus basket" + jar = "jar" + container = "container" + tray = "tray" + basket = "basket" + cell_holder = "cell holder" + + +class SampleRoleType(str, Enum): + control_sample_role = "control sample role" + standard_sample_role = "standard sample role" + validation_sample_role = "validation sample role" + experiment_sample_role = "experiment sample role" + sample_role = "sample role" + spiked_sample_role = "spiked sample role" + blank_role = "blank role" + unknown_sample_role = "unknown sample role" + calibration_sample_role = "calibration sample role" + unspiked_sample_role = "unspiked sample role" + specimen_role = "specimen role" + quality_control_sample_role = "quality control sample role" + reference_sample_role = "reference sample role" + + +@dataclass +class DataSource: + identifier: str + feature: str + + +@dataclass +class Error: + error: str + feature: str + + +@dataclass +class CalculatedDataItem: + identifier: str + name: str + value: float + unit: str + data_sources: list[DataSource] + + +@dataclass +class CalculatedData: + items: list[CalculatedDataItem] + + +@dataclass +class ProcessedData: + # Settings + cycle_threshold_value_setting: float | None = None + cycle_threshold_result: float | None = None + automatic_cycle_threshold_enabled_setting: bool | None = None + automatic_baseline_determination_enabled_setting: bool | None = None + baseline_determination_start_cycle_setting: int | None = None + baseline_determination_end_cycle_setting: int | None = None + genotyping_determination_method_setting: float | None = None + + # Results + genotyping_determination_result: str | None = None + normalized_reporter_result: float | None = None + baseline_corrected_reporter_result: float | None = None + normalized_reporter_data_cube: DataCube | None = None + baseline_corrected_reporter_data_cube: DataCube | None = None + + # Metadata + comments: str | None = None + + data_processing_custom_info: dict[str, Any] | None = None + custom_info: dict[str, Any] | None = None + + +@dataclass +class Measurement: + # Measurement metadata + identifier: str + timestamp: str + sample_identifier: str + target_identifier: str + location_identifier: str + group_identifier: str | None = None + + # Settings + pcr_detection_chemistry: str | None = None + + # Optional measurement metadata + sample_role_type: SampleRoleType | None = None + well_location_identifier: str | None = None + well_plate_identifier: str | None = None + + # Optional settings + total_cycle_number_setting: float | None = None + reporter_dye_setting: str | None = None + quencher_dye_setting: str | None = None + passive_reference_dye_setting: str | None = None + + # Processed data + processed_data: ProcessedData | None = None + reporter_dye_data_cube: DataCube | None = None + passive_reference_dye_data_cube: DataCube | None = None + melting_curve_data_cube: DataCube | None = None + + # Custom metadata + custom_info: dict[str, Any] | None = None + sample_custom_info: dict[str, Any] | None = None + device_control_custom_info: dict[str, Any] | None = None + + # Error document + error_document: list[Error] | None = None + + +@dataclass +class MeasurementGroup: + measurements: list[Measurement] + plate_well_count: int | None + experimental_data_identifier: str + well_volume: float + analyst: str | None = None + custom_info: dict[str, Any] | None = None + + # Error document + error_document: list[Error] | None = None + + +@dataclass +class Metadata: + device_identifier: str + asm_file_identifier: str + data_system_instance_identifier: str + device_type: str + device_serial_number: str + model_number: str + file_name: str + measurement_method_identifier: str + experiment_type: str + container_type: ContainerType + unc_path: str | None = None + software_name: str | None = None + software_version: str | None = None + product_manufacturer: str | None = None + custom_info: dict[str, Any] | None = None + + +@dataclass +class Data: + metadata: Metadata + measurement_groups: list[MeasurementGroup] + calculated_data: CalculatedData | None = None + + +CubeClass = TypeVar("CubeClass") + + +class Mapper(SchemaMapper[Data, Model]): + MANIFEST = "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest" + + def map_model(self, data: Data) -> Model: + return Model( + field_asm_manifest=self.MANIFEST, + qpcr_aggregate_document=add_custom_information_document( + QpcrAggregateDocument( + device_system_document=DeviceSystemDocument( + device_identifier=data.metadata.device_identifier, + model_number=data.metadata.model_number, + equipment_serial_number=data.metadata.device_serial_number, + product_manufacturer=data.metadata.product_manufacturer, + ), + data_system_document=DataSystemDocument( + data_system_instance_identifier=data.metadata.data_system_instance_identifier, + file_name=data.metadata.file_name, + unc_path=data.metadata.unc_path, + software_name=data.metadata.software_name, + software_version=data.metadata.software_version, + asm_converter_name=self.converter_name, + asm_converter_version=ASM_CONVERTER_VERSION, + asm_file_identifier=data.metadata.asm_file_identifier, + ), + qpcr_document=[ + self._get_technique_document(measurement_group, data.metadata) + for measurement_group in data.measurement_groups + ], + calculated_data_aggregate_document=self._get_calculated_data_aggregate_document( + data + ), + ), + data.metadata.custom_info, + ), + ) + + def _get_technique_document( + self, measurement_group: MeasurementGroup, metadata: Metadata + ) -> QpcrDocumentItem: + return QpcrDocumentItem( + analyst=measurement_group.analyst, + measurement_aggregate_document=add_custom_information_document( + MeasurementAggregateDocument( + experimental_data_identifier=measurement_group.experimental_data_identifier, + experiment_type=metadata.experiment_type, + container_type=ModelContainerType(metadata.container_type.value), + well_volume=TQuantityValueMicroliter( + value=measurement_group.well_volume, + ), + plate_well_count=quantity_or_none( + TQuantityValueNumber, measurement_group.plate_well_count + ), + measurement_document=[ + self._get_measurement_document_item( + measurement, + metadata, + measurement_group.experimental_data_identifier, + ) + for measurement in measurement_group.measurements + ], + error_aggregate_document=self._get_error_aggregate_document( + measurement_group.error_document + ), + ), + measurement_group.custom_info or {}, + ), + ) + + def _get_measurement_document_item( + self, + measurement: Measurement, + metadata: Metadata, + experimental_data_identifier: str, + ) -> MeasurementDocumentItem: + sample_doc = add_custom_information_document( + SampleDocument( + sample_identifier=measurement.sample_identifier, + sample_role_type=( + None + if measurement.sample_role_type is None + else ModelSampleRoleType(measurement.sample_role_type.value) + ), + well_location_identifier=measurement.well_location_identifier, + well_plate_identifier=measurement.well_plate_identifier, + location_identifier=measurement.location_identifier, + ), + measurement.sample_custom_info or {}, + ) + + measurement_doc = MeasurementDocumentItem( + measurement_identifier=measurement.identifier, + measurement_time=self.get_date_time(measurement.timestamp), + target_dna_description=measurement.target_identifier, + experimental_data_identifier=experimental_data_identifier, + sample_document=sample_doc, + device_control_aggregate_document=DeviceControlAggregateDocument( + device_control_document=[ + DeviceControlDocumentItem( + device_type=metadata.device_type, + measurement_method_identifier=metadata.measurement_method_identifier, + total_cycle_number_setting=quantity_or_none( + TQuantityValueUnitless, + measurement.total_cycle_number_setting, + ), + q_pcr_detection_chemistry=measurement.pcr_detection_chemistry, + reporter_dye_setting=measurement.reporter_dye_setting, + quencher_dye_setting=measurement.quencher_dye_setting, + passive_reference_dye_setting=measurement.passive_reference_dye_setting, + ) + ], + ), + processed_data_aggregate_document=assert_not_none( + self._get_processed_data_aggregate_document( + measurement.processed_data, + measurement.group_identifier, + ) + ), + reporter_data_cube=get_data_cube( + measurement.reporter_dye_data_cube, ReporterDataCube + ), + passive_reference_data_cube=get_data_cube( + measurement.passive_reference_dye_data_cube, PassiveReferenceDataCube + ), + melting_curve_data_cube=get_data_cube( + measurement.melting_curve_data_cube, MeltingCurveDataCube + ), + error_aggregate_document=self._get_error_aggregate_document( + measurement.error_document + ), + ) + return add_custom_information_document(measurement_doc, measurement.custom_info) + + def _get_processed_data_aggregate_document( + self, data: ProcessedData | None, group_identifier: str | None = None + ) -> ProcessedDataAggregateDocument | None: + if not data: + return None + doc = ProcessedDataDocumentItem( + group_identifier=group_identifier, + data_processing_document=add_custom_information_document( + DataProcessingDocument( + automatic_cycle_threshold_enabled_setting=data.automatic_cycle_threshold_enabled_setting, + cycle_threshold_value_setting__q_pcr_=quantity_or_none( + TQuantityValueUnitless, data.cycle_threshold_value_setting + ), + automatic_baseline_determination_enabled_setting=data.automatic_baseline_determination_enabled_setting, + genotyping_q_pcr_method_setting__q_pcr_=quantity_or_none( + TQuantityValueUnitless, + data.genotyping_determination_method_setting, + ), + baseline_determination_start_cycle_setting=quantity_or_none( + TQuantityValueNumber, + data.baseline_determination_start_cycle_setting, + ), + baseline_determination_end_cycle_setting=quantity_or_none( + TQuantityValueNumber, + data.baseline_determination_end_cycle_setting, + ), + ), + data.data_processing_custom_info, + ), + cycle_threshold_result__q_pcr_=quantity_or_none( + TQuantityValueUnitless, data.cycle_threshold_result + ), + normalized_reporter_result=quantity_or_none( + TQuantityValueUnitless, data.normalized_reporter_result + ), + baseline_corrected_reporter_result=quantity_or_none( + TQuantityValueUnitless, data.baseline_corrected_reporter_result + ), + genotyping_q_pcr_result=data.genotyping_determination_result, + normalized_reporter_data_cube=get_data_cube( + data.normalized_reporter_data_cube, NormalizedReporterDataCube + ), + baseline_corrected_reporter_data_cube=get_data_cube( + data.baseline_corrected_reporter_data_cube, + BaselineCorrectedReporterDataCube, + ), + ) + return ProcessedDataAggregateDocument( + processed_data_document=[ + add_custom_information_document(doc, data.custom_info) + ] + ) + + def _get_calculated_data_aggregate_document( + self, data: Data + ) -> CalculatedDataAggregateDocument | None: + if not data.calculated_data or not data.calculated_data.items: + return None + + return CalculatedDataAggregateDocument( + calculated_data_document=[ + CalculatedDataDocumentItem( + calculated_data_identifier=calc_doc.identifier, + data_source_aggregate_document=DataSourceAggregateDocument( + data_source_document=[ + DataSourceDocumentItem( + data_source_identifier=data_source.identifier, + data_source_feature=data_source.feature, + ) + for data_source in calc_doc.data_sources + ], + ), + calculated_data_name=calc_doc.name, + calculation_description=None, + calculated_result=TQuantityValue( + value=calc_doc.value, unit=calc_doc.unit + ), + ) + for calc_doc in data.calculated_data.items + ], + ) + + def _get_error_aggregate_document( + self, errors: list[Error] | None + ) -> ErrorAggregateDocument | None: + if not errors: + return None + + return ErrorAggregateDocument( + error_document=[ + ErrorDocumentItem(error=error.error, error_feature=error.feature) + for error in errors + ] + ) diff --git a/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/__init__.py b/src/allotropy/allotrope/schema_mappers/adm/pcr/rec/_2026/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/core.schema.json b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/core.schema.json new file mode 100644 index 0000000000..ec94ff1c08 --- /dev/null +++ b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/core.schema.json @@ -0,0 +1,764 @@ +{ + "$defs": { + "asm": { + "properties": { + "$asm.manifest": { + "oneOf": [ + { + "format": "iri", + "type": "string" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/manifest.schema" + } + ] + } + } + }, + "mixedItem": { + "description": "A schema for a polymorphic array item, which requires that each item has a @type declaration", + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + } + }, + "required": [ + "@type" + ] + }, + "orderedItem": { + "description": "A schema for an array item, that is ordered in a not-natural way. This means that it MUST have an explicit @index property stating the position. The index value is a strict positive 32bit signed integer (excluding 0).", + "properties": { + "@index": { + "maximum": 2147483647, + "minimum": 1, + "type": "integer" + } + } + }, + "tArray": { + "$asm.type": "http://purl.allotrope.org/ontologies/common#AFC_0000160", + "description": "An JSON array. This will be mapped to a list, which can be a blank node.", + "type": "array" + }, + "tBooleanValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#boolean", + "description": "A boolean value.", + "oneOf": [ + { + "type": "boolean" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "type": "boolean" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tByteValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#byte", + "description": "A signed 8 bit integer value.", + "oneOf": [ + { + "maximum": 127, + "minimum": -128, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 127, + "minimum": -128, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tClass": { + "$asm.lookup-property": "http://www.w3.org/2004/02/skos/core#prefLabel", + "$asm.type": "http://www.w3.org/2000/01/rdf-schema#Class", + "description": "A class reference is the SKOS preferred label of a class. This label MUST be unique within the transitive closure of the vocabulary referenced by the manifest.", + "type": "string" + }, + "tDateTimeStampValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#dateTimeStamp", + "description": "All timestamps MUST be in ISO8601 date/time format.", + "oneOf": [ + { + "format": "date-time", + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "format": "date-time", + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tDateTimeValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#dateTime", + "description": "All timestamps MUST be in ISO8601 date/time format.", + "oneOf": [ + { + "format": "date-time", + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "format": "date-time", + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tDateValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#date", + "description": "All timestamps MUST be in ISO8601 date format.", + "oneOf": [ + { + "format": "date", + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "format": "date", + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tDecimalValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#decimal", + "description": "A number value stored as an XSD decimal.", + "oneOf": [ + { + "type": "number" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "type": "number" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tDoubleValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#double", + "description": "A number value stored as an XSD double.", + "oneOf": [ + { + "type": "number" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "type": "number" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tDurationValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#duration", + "description": "All durations MUST be in ISO8601 duration format.", + "oneOf": [ + { + "format": "duration", + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "format": "duration", + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tFloatValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#float", + "description": "A number value stored as an XSD float.", + "oneOf": [ + { + "type": "number" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "type": "number" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tIRIValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#anyURI", + "description": "A literal IRI reference, not to be confused with a resource reference (tResource)", + "oneOf": [ + { + "format": "iri", + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "format": "iri", + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tIntValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#int", + "description": "A signed 32 bit integer value.", + "oneOf": [ + { + "maximum": 2147483647, + "minimum": -2147483648, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 2147483647, + "minimum": -2147483648, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tIntegerValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#integer", + "description": "A arbitrary length integer value.", + "oneOf": [ + { + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tLongValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#long", + "description": "A signed 64 bit integer value.", + "oneOf": [ + { + "maximum": 9223372036854775807, + "minimum": -9223372036854775808, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 9223372036854775807, + "minimum": -9223372036854775808, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tNamed": { + "$asm.lookup-property": "http://www.w3.org/2004/02/skos/core#prefLabel", + "$asm.type": "http://www.w3.org/2000/01/rdf-schema#Resource", + "description": "A reference to an arbitrary RDF resource identified by a SKOS preferred label. The label MUST be unique.", + "type": "string" + }, + "tNumericValue": { + "anyOf": [ + { + "$ref": "#/$defs/tByteValue" + }, + { + "$ref": "#/$defs/tShortValue" + }, + { + "$ref": "#/$defs/tIntValue" + }, + { + "$ref": "#/$defs/tLongValue" + }, + { + "$ref": "#/$defs/tUnsignedByteValue" + }, + { + "$ref": "#/$defs/tUnsignedShortValue" + }, + { + "$ref": "#/$defs/tUnsignedIntValue" + }, + { + "$ref": "#/$defs/tUnsignedLongValue" + }, + { + "$ref": "#/$defs/tFloatValue" + }, + { + "$ref": "#/$defs/tDoubleValue" + }, + { + "$ref": "#/$defs/tDecimalValue" + }, + { + "$ref": "#/$defs/tIntegerValue" + } + ] + }, + "tObject": { + "$asm.type": "http://www.w3.org/2000/01/rdf-schema#Resource", + "description": "An JSON object with properties. This will be mapped to an RDF resource, which can be a blank node.", + "type": "object" + }, + "tOrderedValue": { + "oneOf": [ + { + "$ref": "#/$defs/tNumericValue" + }, + { + "$ref": "#/$defs/tStringValue" + }, + { + "$ref": "#/$defs/tDateTimeValue" + }, + { + "$ref": "#/$defs/tDateTimeStampValue" + }, + { + "$ref": "#/$defs/tDateValue" + }, + { + "$ref": "#/$defs/tTimeValue" + } + ] + }, + "tQuantityValue": { + "$asm.type": "http://qudt.org/schema/qudt#QuantityValue", + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "has statistic datum role": { + "$ref": "#/$defs/tStatisticDatumRole" + }, + "unit": { + "$ref": "#/$defs/tUnit" + }, + "value": { + "type": "number" + } + }, + "required": [ + "value", + "unit" + ], + "type": "object" + }, + "tRangeValue": { + "$asm.type": "http://purl.allotrope.org/ontologies/common#AFC_0000021", + "dependencies": { + "maxExclusive": { + "not": { + "required": [ + "max" + ] + } + }, + "maxInclusive": { + "not": { + "required": [ + "maxExclusive" + ] + } + }, + "minExclusive": { + "not": { + "required": [ + "min" + ] + } + }, + "minInclusive": { + "not": { + "required": [ + "minExclusive" + ] + } + } + }, + "properties": { + "maxExclusive": { + "$ref": "#/$defs/tOrderedValue" + }, + "maxInclusive": { + "$ref": "#/$defs/tOrderedValue" + }, + "minExclusive": { + "$ref": "#/$defs/tOrderedValue" + }, + "minInclusive": { + "$ref": "#/$defs/tOrderedValue" + }, + "unit": { + "$ref": "#/$defs/tUnit" + } + }, + "type": "object" + }, + "tReference": { + "$asm.type": "http://www.w3.org/2000/01/rdf-schema#Resource", + "description": "A reference to an object within an JSON document using JSON pointers.", + "format": "uri-reference", + "type": "string" + }, + "tResource": { + "$asm.type": "http://www.w3.org/2000/01/rdf-schema#Resource", + "description": "A reference to an arbitrary RDF resource identified by an IRI. The mapping to RDF will introduce a node reference instead of a literal IRI.", + "format": "iri", + "type": "string" + }, + "tShortValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#short", + "description": "A signed 16 bit integer value.", + "oneOf": [ + { + "maximum": 32767, + "minimum": -32768, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 32767, + "minimum": -32768, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tStatisticDatumRole": { + "$asm.lookup-property": "http://www.w3.org/2004/02/skos/core#prefLabel", + "$asm.type": "http://www.w3.org/2000/01/rdf-schema#Class", + "$asm.value-sub-class-of": "http://purl.allotrope.org/ontologies/role#AFRL_0000328", + "description": "A statistic datum role.", + "enum": [ + "arithmetic mean role", + "median role", + "relative standard deviation role", + "skewness role", + "standard deviation role", + "variance role", + "maximum value role", + "minimum value role", + "initial value role", + "final value role", + "geometric mean role", + "coefficient of variation role", + "median absolute deviation role" + ], + "type": "string" + }, + "tStringValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "description": "A literal string in UTF-8 encoding.", + "oneOf": [ + { + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tTimeValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#time", + "description": "All timestamps MUST be in ISO8601 time format.", + "oneOf": [ + { + "format": "time", + "type": "string" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "format": "time", + "type": "string" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tUnit": { + "$asm.lookup-property": "http://purl.allotrope.org/ontology/qudt-ext/schema#symbol", + "$asm.type": "http://qudt.org/schema/qudt#Unit", + "description": "A unit is referenced by its QUDT symbol. It MUST be unique within the QUDT units defined in the vocabularies declared in the manifest.", + "type": "string" + }, + "tUnsignedByteValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#unsignedByte", + "description": "An unsigned 8 bit integer value.", + "oneOf": [ + { + "maximum": 255, + "minimum": 0, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 255, + "minimum": 0, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tUnsignedIntValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#unsignedInt", + "description": "A signed 32 bit integer value.", + "oneOf": [ + { + "maximum": 4294967295, + "minimum": 0, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 4294967295, + "minimum": 0, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tUnsignedLongValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#unsignedLong", + "description": "A signed 64 bit integer value.", + "oneOf": [ + { + "maximum": 18446744073709551615, + "minimum": 0, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 18446744073709551615, + "minimum": 0, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + }, + "tUnsignedShortValue": { + "$asm.type": "http://www.w3.org/2001/XMLSchema#unsignedShort", + "description": "An unsigned 16 bit integer value.", + "oneOf": [ + { + "maximum": 65535, + "minimum": 0, + "type": "integer" + }, + { + "properties": { + "@type": { + "$ref": "#/$defs/tClass" + }, + "value": { + "maximum": 65535, + "minimum": 0, + "type": "integer" + } + }, + "required": [ + "@type", + "value" + ], + "type": "object" + } + ] + } + }, + "$id": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema", + "title": "Schema for leaf node values." +} \ No newline at end of file diff --git a/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/cube.schema.json b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/cube.schema.json new file mode 100644 index 0000000000..0e203710aa --- /dev/null +++ b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/cube.schema.json @@ -0,0 +1,378 @@ +{ + "$defs": { + "cFillValueBoolean": { + "$comment": "constraint on fill values if component data type is boolean", + "if": { + "properties": { + "@componentDatatype": { + "const": "boolean" + } + } + }, + "then": { + "$asm.fill-value": { + "default": false, + "type": "boolean" + } + } + }, + "cFillValueDecimal": { + "$comment": "constraint on fill values if component data type is any numeric type", + "if": { + "properties": { + "@componentDatatype": { + "pattern": "integer|decimal|long|int|short|byte" + } + } + }, + "then": { + "$asm.fill-value": { + "default": 0, + "type": "number" + } + } + }, + "cFillValueIEEE": { + "$comment": "constraint on fill values if component data type is any numeric type", + "if": { + "properties": { + "@componentDatatype": { + "pattern": "double|float" + } + } + }, + "then": { + "$asm.fill-value": { + "default": 0.0, + "oneOf": [ + { + "type": "number" + }, + { + "const": "NaN" + }, + { + "const": "+Infinity" + }, + { + "const": "-Infinity" + } + ] + } + } + }, + "cFillValueString": { + "$comment": "constraint on fill values if component data type is string", + "if": { + "properties": { + "@componentDatatype": { + "pattern": "string|dateTime|date" + } + } + }, + "then": { + "$asm.fill-value": { + "default": "", + "type": "string" + } + } + }, + "tBooleanArray": { + "$comment": "homogenous array of booleans", + "items": { + "type": "boolean" + }, + "type": "array" + }, + "tBooleanOrNullArray": { + "$comment": "homogenous array of booleans, may contain null values", + "items": { + "anyOf": [ + { + "type": "boolean" + }, + { + "type": "null" + } + ] + }, + "type": "array" + }, + "tDatacube": { + "properties": { + "cube-structure": { + "$ref": "#/$defs/tDatacubeStructure" + }, + "data": { + "$ref": "#/$defs/tDatacubeData" + }, + "label": { + "type": "string" + } + }, + "type": "object" + }, + "tDatacubeComponent": { + "allOf": [ + { + "$ref": "#/$defs/cFillValueIEEE" + }, + { + "$ref": "#/$defs/cFillValueDecimal" + }, + { + "$ref": "#/$defs/cFillValueBoolean" + }, + { + "$ref": "#/$defs/cFillValueString" + } + ], + "properties": { + "$asm.fill-value": { + "type": [ + "string", + "number", + "integer", + "boolean" + ] + }, + "@componentDatatype": { + "default": "double", + "description": "Subset of XSD datatypes supported in simple models", + "enum": [ + "double", + "float", + "decimal", + "integer", + "byte", + "int", + "short", + "long", + "string", + "boolean", + "dateTime" + ] + }, + "concept": { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tClass" + }, + "scale": { + "enum": [ + "nominal", + "ordinal", + "cardinal", + "interval", + "range" + ] + }, + "unit": { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tUnit" + } + }, + "required": [ + "@componentDatatype", + "concept" + ], + "type": "object" + }, + "tDatacubeData": { + "allOf": [ + { + "$ref": "#/$defs/tDimensionData" + }, + { + "$ref": "#/$defs/tMeasureData" + } + ] + }, + "tDatacubeStructure": { + "properties": { + "dimensions": { + "items": { + "$ref": "#/$defs/tDatacubeComponent" + }, + "type": "array", + "uniqueItems": true + }, + "measures": { + "items": { + "$ref": "#/$defs/tDatacubeComponent" + }, + "minItems": 1, + "type": "array", + "uniqueItems": true + } + }, + "required": [ + "dimensions", + "measures" + ], + "type": "object" + }, + "tDimensionArray": { + "$comment": "homogenous array of data used in explicit dimension arrays", + "oneOf": [ + { + "$ref": "#/$defs/tNumberArray" + }, + { + "$ref": "#/$defs/tBooleanArray" + }, + { + "$ref": "#/$defs/tStringArray" + } + ] + }, + "tDimensionData": { + "properties": { + "dimensions": { + "items": { + "oneOf": [ + { + "$ref": "#/$defs/tDimensionArray" + }, + { + "$ref": "#/$defs/tFunction" + } + ] + }, + "type": "array" + } + }, + "required": [ + "dimensions" + ] + }, + "tFunction": { + "properties": { + "incr": { + "default": 1, + "type": "number" + }, + "length": { + "type": "number" + }, + "start": { + "default": 1, + "type": "number" + }, + "type": { + "default": "linear", + "enum": [ + "linear", + "logarithmic" + ] + } + }, + "type": "object" + }, + "tMeasureArray": { + "$comment": "homogenous array of data used in explicit measure arrays, may contain null values", + "oneOf": [ + { + "$ref": "#/$defs/tNumberOrNullArray" + }, + { + "$ref": "#/$defs/tBooleanOrNullArray" + }, + { + "$ref": "#/$defs/tStringOrNullArray" + } + ] + }, + "tMeasureData": { + "oneOf": [ + { + "properties": { + "measures": { + "items": { + "$ref": "#/$defs/tMeasureArray" + }, + "type": "array" + } + }, + "required": [ + "measures" + ] + }, + { + "properties": { + "points": { + "items": { + "$ref": "#/$defs/tTupleData" + }, + "type": "array" + } + }, + "required": [ + "points" + ] + } + ] + }, + "tNumberArray": { + "$comment": "homogenous array of numbers", + "items": { + "type": "number" + }, + "type": "array" + }, + "tNumberOrNullArray": { + "$comment": "homogenous array of numbers, may contain null values", + "items": { + "anyOf": [ + { + "type": "number" + }, + { + "type": "null" + } + ] + }, + "type": "array" + }, + "tStringArray": { + "$comment": "homogenous array of strings", + "items": { + "type": "string" + }, + "type": "array" + }, + "tStringOrNullArray": { + "$comment": "homogenous array of strings, may contain null values", + "items": { + "anyOf": [ + { + "type": "string" + }, + { + "type": "null" + } + ] + }, + "type": "array" + }, + "tTupleData": { + "$comment": "heterogenous array of data used in point arrays", + "items": { + "oneOf": [ + { + "type": "number" + }, + { + "type": "boolean" + }, + { + "type": "string" + }, + { + "type": "null" + } + ] + }, + "type": "array" + } + }, + "$id": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/cube.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema" +} \ No newline at end of file diff --git a/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/hierarchy.schema.json b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/hierarchy.schema.json new file mode 100644 index 0000000000..0ea67c1851 --- /dev/null +++ b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/hierarchy.schema.json @@ -0,0 +1,2228 @@ +{ + "$defs": { + "calculatedDataAggregateDocument": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002889", + "properties": { + "calculated data document": { + "$asm.array-mixed": false, + "$asm.array-ordered": true, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002890", + "properties": { + "calculated data identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002893", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "calculated data name": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002891", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "calculated result": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002892", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + } + ] + }, + "calculation description": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002141", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "data source aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/dataSourceAggregateDocument" + } + ] + }, + "electronic project record": { + "allOf": [ + { + "$ref": "#/$defs/electronicProjectRecord" + } + ] + } + }, + "required": [ + "calculated data name", + "calculated result" + ], + "type": "object" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 1, + "type": "array" + } + }, + "required": [ + "calculated data document" + ], + "type": "object" + }, + "customInformationAggregateDocument": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002858", + "properties": { + "custom information document": { + "$asm.array-mixed": false, + "$asm.array-ordered": true, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002764", + "properties": { + "datum label": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.obolibrary.org/obo/IAO_0000009", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "datum label" + ], + "type": "object" + }, + { + "oneOf": [ + { + "properties": { + "scalar double datum": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001104", + "$asm.type": "http://www.w3.org/2001/XMLSchema#double", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tDoubleValue" + }, + "unit": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0003122", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "scalar double datum" + ] + }, + { + "properties": { + "scalar string datum": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001511", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "scalar string datum" + ] + }, + { + "properties": { + "scalar timestamp datum": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001512", + "$asm.type": "http://www.w3.org/2001/XMLSchema#dateTime", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tDateTimeValue" + } + }, + "required": [ + "scalar timestamp datum" + ] + }, + { + "properties": { + "scalar boolean datum": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001510", + "$asm.type": "http://www.w3.org/2001/XMLSchema#boolean", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tBooleanValue" + } + }, + "required": [ + "scalar boolean datum" + ] + } + ] + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "type": "array" + } + }, + "required": [ + "custom information document" + ], + "type": "object" + }, + "dataSourceAggregateDocument": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002894", + "properties": { + "data source document": { + "$asm.array-mixed": false, + "$asm.array-ordered": true, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002895", + "properties": { + "data source feature": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002898", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "data source identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002896", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "data source identifier" + ], + "type": "object" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 1, + "type": "array" + } + }, + "required": [ + "data source document" + ], + "type": "object" + }, + "electronicProjectRecord": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002331", + "properties": { + "description": { + "$asm.pattern": "any datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000922" + }, + "start time": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002422", + "$asm.type": "http://www.w3.org/2001/XMLSchema#dateTime", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tDateTimeValue" + }, + "written name": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.obolibrary.org/obo/IAO_0000590", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "written name" + ], + "type": "object" + }, + "electronicSignatureAggregateDocument": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0003033", + "properties": { + "electronic signature document": { + "$asm.array-mixed": false, + "$asm.array-ordered": false, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002769", + "properties": { + "account identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002770", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000917", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "measurement identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001121", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "method identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002034", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "personal name": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001063", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "processed data identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002897", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "signature role type": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002794", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "time": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000937", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "account identifier", + "personal name", + "signature role type", + "time" + ], + "type": "object" + }, + { + "anyOf": [ + { + "required": [ + "identifier" + ] + }, + { + "required": [ + "measurement identifier" + ] + }, + { + "required": [ + "processed data identifier" + ] + }, + { + "required": [ + "method identifier" + ] + } + ] + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 0, + "type": "array" + } + }, + "type": "object" + }, + "errorAggregateDocument": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002951", + "properties": { + "error document": { + "$asm.array-mixed": false, + "$asm.array-ordered": false, + "$asm.pattern": "indexed datum", + "items": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002952", + "properties": { + "error": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002804", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "error feature": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002953", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "error" + ], + "type": "object" + }, + "minItems": 0, + "type": "array" + } + }, + "type": "object" + }, + "imageAggregateDocument": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002869", + "properties": { + "image document": { + "$asm.array-mixed": false, + "$asm.array-ordered": false, + "$asm.pattern": "indexed datum", + "items": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002225", + "properties": { + "experimental data identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001977", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "index": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000928", + "$asm.type": "http://www.w3.org/2001/XMLSchema#integer", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tIntegerValue" + } + }, + "type": "object" + }, + "minItems": 0, + "type": "array" + } + }, + "type": "object" + }, + "log": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000900", + "properties": { + "custom information aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/customInformationAggregateDocument" + } + ] + }, + "log entry": { + "$asm.array-mixed": false, + "$asm.array-ordered": false, + "$asm.pattern": "indexed datum", + "items": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000901", + "properties": { + "author": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0003096", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "custom information aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/customInformationAggregateDocument" + } + ] + }, + "elapsed time": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002050", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/min" + } + ] + }, + "identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000917", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": 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"#/$defs/imageAggregateDocument" + } + ] + }, + "measurement document": { + "$asm.array-mixed": false, + "$asm.array-ordered": false, + "$asm.pattern": "indexed datum", + "items": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002375", + "properties": { + "analytical method identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001978", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "calculated data aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/calculatedDataAggregateDocument" + } + ] + }, + "custom information aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/customInformationAggregateDocument" + } + ] + }, + "detection type": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002534", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "device control aggregate document": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002722", + "properties": { + "custom information aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/customInformationAggregateDocument" + } + ] + }, + "device control document": { + "$asm.array-mixed": false, + "$asm.array-ordered": true, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002723", + "properties": { + "brand name": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001680", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "custom information aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/customInformationAggregateDocument" + } + ] + }, + "detection type": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002534", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "device identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002018", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "device type": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002568", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001815", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "equipment serial number": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001119", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "firmware version": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001259", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "model number": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.obolibrary.org/obo/IAO_0000017", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "product manufacturer": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001258", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "device type" + ], + "type": "object" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 1, + "type": "array" + } + }, + "required": [ + "device control document" + ], + "type": "object" + }, + "duration": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000951", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "electronic project record": { + "allOf": [ + { + "$ref": "#/$defs/electronicProjectRecord" + } + ] + }, + "error aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/errorAggregateDocument" + } + ] + }, + "experimental data identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001977", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "image aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/imageAggregateDocument" + } + ] + }, + "measurement identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001121", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "measurement time": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000952", + "$asm.type": "http://www.w3.org/2001/XMLSchema#dateTimeStamp", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tDateTimeStampValue" + }, + "method version": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002837", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "processed data aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/processedDataAggregateDocument" + } + ] + }, + "sample document": { + "$asm.pattern": "aggregate datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002083", + "properties": { + "batch identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001120", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "custom information aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/customInformationAggregateDocument" + } + ] + }, + "description": { + "$asm.pattern": "any datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0000922" + }, + "location identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002844", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "sample identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001118", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "sample role type": { + "$asm.pattern": "class datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002242", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tClass" + }, + { + "$asm.value-sub-class-of": "http://purl.allotrope.org/ontologies/role#AFRL_0000035", + "enum": [ + "control sample role", + "standard sample role", + "validation sample role", + "experiment sample role", + "sample role", + "spiked sample role", + "blank role", + "unknown sample role", + "calibration sample role", + "unspiked sample role", + "specimen role", + "quality control sample role", + "reference sample role" + ], + "type": "string" + } + ] + }, + "written name": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.obolibrary.org/obo/IAO_0000590", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "sample identifier" + ], + "type": "object" + }, + "statistics aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/statisticsAggregateDocument" + } + ] + } + }, + "required": [ + "sample document", + "device control aggregate document" + ], + "type": "object" + }, + "minItems": 1, + "type": "array" + }, + "processed data aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/processedDataAggregateDocument" + } + ] + }, + "statistics aggregate document": { + "allOf": [ + { + "$ref": "#/$defs/statisticsAggregateDocument" + } + ] + } + }, + "required": [ + "measurement document" + ], + "type": "object" + }, + "submitter": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002531", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "measurement aggregate document" + ], + "type": "object" + } + }, + "$id": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/hierarchy.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema", + "title": "Common hierarchy schema defs." +} \ No newline at end of file diff --git a/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/manifest.schema.json b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/manifest.schema.json new file mode 100644 index 0000000000..99cdd8cd2c --- /dev/null +++ b/src/allotropy/allotrope/schemas/adm/core/REC/2026/03/manifest.schema.json @@ -0,0 +1,48 @@ +{ + "$id": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/manifest.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema", + "properties": { + "@id": { + "format": "uri", + "maxItems": 1, + "minItems": 1, + "type": "string" + }, + "@type": { + "format": "uri", + "maxItems": 1, + "minItems": 1, + "type": "string" + }, + "json-schemas": { + "items": { + "format": "uri", + "type": "string" + }, + "minItems": 1, + "type": "array" + }, + "shapes": { + "items": { + "format": "uri", + "type": "string" + }, + "minItems": 1, + "type": "array" + }, + "vocabulary": { + "items": { + "format": "uri", + "type": "string" + }, + "minItems": 1, + "type": "array" + } + }, + "required": [ + "vocabulary", + "json-schemas" + ], + "title": "Schema for manifests.", + "type": "object" +} \ No newline at end of file diff --git a/src/allotropy/allotrope/schemas/adm/pcr/REC/2026/03/dpcr.schema.json b/src/allotropy/allotrope/schemas/adm/pcr/REC/2026/03/dpcr.schema.json new file mode 100644 index 0000000000..0426fc1109 --- /dev/null +++ b/src/allotropy/allotrope/schemas/adm/pcr/REC/2026/03/dpcr.schema.json @@ -0,0 +1,388 @@ +{ + "$id": "http://purl.allotrope.org/json-schemas/adm/pcr/REC/2026/03/dpcr.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema", + "allOf": [ + { + "properties": { + "pcr aggregate document": { + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/hierarchy.schema#/$defs/techniqueAggregateDocument" + }, + { + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002925", + "properties": { + "device system document": { + "required": [ + "model number" + ] + }, + "pcr document": { + "$asm.array-mixed": false, + "$asm.array-ordered": true, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/hierarchy.schema#/$defs/techniqueDocument" + }, + { + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002926", + "properties": { + "measurement aggregate document": { + "properties": { + "container type": { + "$asm.pattern": "class datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001987", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tClass" + }, + { + "$asm.value-sub-class-of": "http://purl.allotrope.org/ontologies/equipment#AFE_0000407", + "enum": [ + "reactor", + "controlled lab reactor", + "tube", + "well plate", + "differential scanning calorimetry pan", + "PCR reaction block", + "vial rack", + "pan", + "reservoir", + "array card block", + "capillary", + "disintegration apparatus basket", + "jar", + "container", + "tray", + "basket", + "cell holder" + ], + "type": "string" + } + ] + }, + "experiment type": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002229", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "measurement document": { + "items": { + "allOf": [ + { + "properties": { + "device control aggregate document": { + "properties": { + "device control document": { + "items": { + "allOf": [ + { + "properties": { + "PCR detection chemistry": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002233", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "annealing duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002905", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "annealing temperature setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002904", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/degC" + } + ] + }, + "denaturing duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002903", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "denaturing temperature setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002902", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/degC" + } + ] + }, + "measurement method identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002003", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "passive reference dye setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002234", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "primer extension duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002907", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "primer extension temperature setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002906", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/degC" + } + ] + }, + "quencher dye setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002244", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "reporter dye setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002243", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "total cycle number setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002901", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + } + } + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 1 + } + } + }, + "processed data aggregate document": { + "properties": { + "processed data document": { + "items": { + "allOf": [ + { + "properties": { + "data processing document": { + "properties": { + "fluorescence intensity threshold setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002928", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/RFU" + } + ] + } + } + }, + "negative partition count": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002930", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + }, + "number concentration": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002935", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/Counts~1%CE%BCL" + } + ] + }, + "positive partition count": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002929", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + } + }, + "required": [ + "number concentration", + "positive partition count" + ] + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 1 + } + } + }, + "sample document": { + "properties": { + "vial location identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002464", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "well location identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002240", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "well plate identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002888", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + } + }, + "required": [ + "location identifier" + ] + }, + "target DNA description": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002241", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "total partition count": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002927", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + } + }, + "required": [ + "measurement identifier", + "measurement time", + "total partition count" + ] + } + ] + } + }, + "plate well count": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002231", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/%23" + } + ] + }, + "well volume": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002232", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/%CE%BCL" + } + ] + } + }, + "required": [ + "experiment type" + ] + } + } + } + ] + }, + "minItems": 1, + "type": "array" + } + }, + "required": [ + "pcr document" + ] + } + ] + } + } + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/asm" + } + ], + "required": [ + "$asm.manifest" + ] +} \ No newline at end of file diff --git a/src/allotropy/allotrope/schemas/adm/pcr/REC/2026/03/qpcr.schema.json b/src/allotropy/allotrope/schemas/adm/pcr/REC/2026/03/qpcr.schema.json new file mode 100644 index 0000000000..8b892be8db --- /dev/null +++ b/src/allotropy/allotrope/schemas/adm/pcr/REC/2026/03/qpcr.schema.json @@ -0,0 +1,752 @@ +{ + "$id": "http://purl.allotrope.org/json-schemas/adm/pcr/REC/2026/03/qpcr.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema", + "allOf": [ + { + "properties": { + "qpcr aggregate document": { + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/hierarchy.schema#/$defs/techniqueAggregateDocument" + }, + { + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002899", + "properties": { + "device system document": { + "required": [ + "device identifier", + "model number", + "equipment serial number" + ] + }, + "qpcr document": { + "$asm.array-mixed": false, + "$asm.array-ordered": true, + "$asm.pattern": "indexed datum", + "items": { + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/hierarchy.schema#/$defs/techniqueDocument" + }, + { + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002900", + "properties": { + "measurement aggregate document": { + "properties": { + "container type": { + "$asm.pattern": "class datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0001987", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tClass" + }, + { + "$asm.value-sub-class-of": "http://purl.allotrope.org/ontologies/equipment#AFE_0000407", + "enum": [ + "reactor", + "controlled lab reactor", + "tube", + "well plate", + "differential scanning calorimetry pan", + "PCR reaction block", + "vial rack", + "pan", + "reservoir", + "array card block", + "capillary", + "disintegration apparatus basket", + "jar", + "container", + "tray", + "basket", + "cell holder" + ], + "type": "string" + } + ] + }, + "experiment type": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002229", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "measurement document": { + "items": { + "allOf": [ + { + "properties": { + "device control aggregate document": { + "properties": { + "device control document": { + "items": { + "allOf": [ + { + "properties": { + "annealing duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002905", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "annealing temperature setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002904", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/degC" + } + ] + }, + "denaturing duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002903", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "denaturing temperature setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002902", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/degC" + } + ] + }, + "measurement method identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002003", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "passive reference dye setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002234", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "primer extension duration setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002907", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/s" + } + ] + }, + "primer extension temperature setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002906", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/degC" + } + ] + }, + "qPCR detection chemistry": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002233", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "quencher dye setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002244", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "reporter dye setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002243", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tStringValue" + }, + "total cycle number setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002901", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + } + }, + "required": [ + "measurement method identifier" + ] + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/orderedItem" + } + ] + }, + "minItems": 1 + } + } + }, + "melting curve data cube": { + "$asm.pattern": "datacube", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002913", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/cube.schema#/$defs/tDatacube" + }, + { + "properties": { + "cube-structure": { + "properties": { + "dimensions": { + "maxItems": 1, + "minItems": 1, + "prefixItems": [ + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "temperature" + }, + "unit": { + "const": "degC" + } + } + } + ] + }, + "measures": { + "contains": { + "oneOf": [ + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "fluorescence" + }, + "unit": { + "const": "RFU" + } + } + }, + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "slope" + }, + "unit": { + "const": "(unitless)" + } + } + } + ] + }, + "maxItems": 2, + "minItems": 2 + } + } + } + } + } + ], + "type": "object" + }, + "passive reference data cube": { + "$asm.pattern": "datacube", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002912", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/cube.schema#/$defs/tDatacube" + }, + { + "properties": { + "cube-structure": { + "properties": { + "dimensions": { + "maxItems": 1, + "minItems": 1, + "prefixItems": [ + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "cycle count" + }, + "unit": { + "const": "#" + } + } + } + ] + }, + "measures": { + "contains": { + "oneOf": [ + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "fluorescence" + }, + "unit": { + "const": "RFU" + } + } + } + ] + }, + "maxItems": 1, + "minItems": 1 + } + } + } + } + } + ], + "type": "object" + }, + "processed data aggregate document": { + "properties": { + "processed data document": { + "items": { + "allOf": [ + { + "properties": { + "baseline corrected reporter data cube": { + "$asm.pattern": "datacube", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002310", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/cube.schema#/$defs/tDatacube" + }, + { + "properties": { + "cube-structure": { + "properties": { + "dimensions": { + "maxItems": 1, + "minItems": 1, + "prefixItems": [ + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "cycle count" + }, + "unit": { + "const": "#" + } + } + } + ] + }, + "measures": { + "contains": { + "oneOf": [ + { + "properties": { + "@componentDatatype": { + "const": "double" + }, + "concept": { + "const": "baseline corrected reporter result" + }, + "unit": { + "const": "(unitless)" + } + } + } + ] + }, + "maxItems": 1, + "minItems": 1 + } + } + } + } + } + ] + }, + "baseline corrected reporter result": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002248", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + }, + "cycle threshold result (qPCR)": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002246", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + }, + "data processing document": { + "properties": { + "automatic baseline determination enabled setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002237", + "$asm.type": "http://www.w3.org/2001/XMLSchema#boolean", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tBooleanValue" + }, + "automatic cycle threshold enabled setting": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002235", + "$asm.type": "http://www.w3.org/2001/XMLSchema#boolean", + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tBooleanValue" + }, + "baseline determination end cycle setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002239", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/%23" + } + ] + }, + "baseline determination start cycle setting": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002238", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/%23" + } + ] + }, + "cycle threshold value setting (qPCR)": { + "$asm.pattern": "quantity datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002236", + "allOf": [ + { + "$ref": "http://purl.allotrope.org/json-schemas/adm/core/REC/2026/03/core.schema#/$defs/tQuantityValue" + }, + { + "$ref": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema#/$defs/(unitless)" + } + ] + }, + "genotyping qPCR method identifier": { + "$asm.pattern": "value datum", + "$asm.property-class": "http://purl.allotrope.org/ontologies/result#AFR_0002908", + "$asm.type": "http://www.w3.org/2001/XMLSchema#string", + "$ref": 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"required": [ + "unit" + ] + }, + "GeV^-2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PerSquareGigaElectronVolt", + "const": "GeV^-2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Gi": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Gilbert", + "const": "Gi", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Gs": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Gauss", + "const": "Gs", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Gy": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Gray", + "const": "Gy", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Gy/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#GrayPerSecond", + "const": "Gy/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "H": { + "properties": { + "unit": { + "$asm.unit-iri": 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"properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KelvinPerTesla", + "const": "K/T", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "K/W": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KelvinPerWatt", + "const": "K/W", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "K/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KelvinPerHour", + "const": "K/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "K/m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KelvinPerMinute", + "const": "K/m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "K/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KelvinPerSecond", + "const": "K/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "L": { + "properties": { + "unit": { + "$asm.unit-iri": 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"http://qudt.org/vocab/unit#CentimeterOfWater", + "const": "cmH2O", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareCentimeter", + "const": "cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "cm^2 min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareCentimeterMinute", + "const": "cm^2 min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "cm^2 s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareCentimeterSecond", + "const": "cm^2 s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "cm^2/g": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#SquareCentimetersPerGram", + "const": "cm^2/g", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "cm^2/mol": { + "properties": { + "unit": { + 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"http://purl.allotrope.org/ontology/qudt-ext/unit#Femtogram", + "const": "fg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fg/L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#FemtogramPerLiter", + "const": "fg/L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fg/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#FemtogramPerSquareCentimeter", + "const": "fg/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fg/fL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#FemtogramPerFemtoliter", + "const": "fg/fL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fg/mL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#FemtogramPerMilliliter", + "const": "fg/mL", + "type": "string" + } + }, + "required": 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"const": "flight", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Femtometer", + "const": "fm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fmol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Femtomole", + "const": "fmol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fmol/L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Femtomolar", + "const": "fmol/L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fps": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FramePerSecond", + "const": "fps", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Foot", + "const": "ft", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootLambert", + "const": "ft L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForce", + "const": "ft lbf", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf/(ft^2 s)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForcePerSquareFootSecond", + "const": "ft lbf/(ft^2 s)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf/ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForcePerSquareFoot", + "const": "ft lbf/ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForcePerHour", + "const": "ft lbf/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf/m^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForcePerSquareMeter", + "const": "ft lbf/m^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForcePerMinute", + "const": "ft lbf/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft lbf/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForcePerSecond", + "const": "ft lbf/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft-pdl": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundal", + "const": "ft-pdl", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPerHour", + "const": "ft/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPerMinute", + "const": "ft/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPerSecond", + "const": "ft/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft/s^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPerSecondSquared", + "const": "ft/s^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ftH2O": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootOfWater", + "const": "ftH2O", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ftUS": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootUSSurvey", + "const": "ftUS", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFoot", + "const": "ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2 h °F": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFootHourDegreeFahrenheit", + "const": "ft^2 h °F", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2 s °F": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFootSecondDegreeFahrenheit", + "const": "ft^2 s °F", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2 °F": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFootDegreeFahrenheit", + "const": "ft^2 °F", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2/(Btu in)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFootPerBtuInch", + "const": "ft^2/(Btu in)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFootPerHour", + "const": "ft^2/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^2/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareFootPerSecond", + "const": "ft^2/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicFoot", + "const": "ft^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^3/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicFootPerMinute", + "const": "ft^3/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ft^3/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicFootPerSecond", + "const": "ft^3/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "fur": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Furlong", + "const": "fur", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Gram", + "const": "g", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g °C": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#GramDegreeCelsius", + "const": "g °C", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerLiter", + "const": "g/L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerSquareCentimeter", + "const": "g/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/cm^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerCubicCentimeter", + "const": "g/cm^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/fL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerFemtoliter", + "const": "g/fL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/mL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerMilliliter", + "const": "g/mL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/m^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerSquareMeter", + "const": "g/m^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramsPerMinute", + "const": "g/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/mol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerMole", + "const": "g/mol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/nL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerNanoliter", + "const": "g/nL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/pL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerPicoliter", + "const": "g/pL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "g/μL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#GramPerMicroliter", + "const": "g/μL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "gal/d": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#GallonUSPerDay", + "const": "gal/d", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "gal/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#GallonUSPerMinute", + "const": "gal/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "gamma": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Gamma", + "const": "gamma", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "gon": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Gon", + "const": "gon", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "gr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Grain", + "const": "gr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "gr/gal": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#GrainPerGallon", + "const": "gr/gal", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "grad": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Grad", + "const": "grad", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "grd": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Grade", + "const": "grd", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Hour", + "const": "h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "h ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HourSquareFoot", + "const": "h ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ha": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Hectare", + "const": "ha", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "hp/H2O": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HorsepowerWater", + "const": "hp/H2O", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "hp/V": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HorsepowerElectric", + "const": "hp/V", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "hp/boiler": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HorsepowerBoiler", + "const": "hp/boiler", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "hp/m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HorsepowerMetric", + "const": "hp/m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "hr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HourSidereal", + "const": "hr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "imp gal": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#GallonImperial", + "const": "imp gal", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "in": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Inch", + "const": "in", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "in lbf": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#InchPoundForce", + "const": "in lbf", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "in/s^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#InchPerSecondSquared", + "const": "in/s^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "inAq": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#InchOfWater", + "const": "inAq", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "inHg": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#InchOfMercury", + "const": "inHg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "in^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareInch", + "const": "in^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "in^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicInch", + "const": "in^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "in^3/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicInchPerMinute", + "const": "in^3/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kHz": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KiloHertz", + "const": "kHz", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kJ/(mol K)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KiloJoulePerMoleKelvin", + "const": "kJ/(mol K)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kPa": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KiloPascal", + "const": "kPa", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kPaA": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KiloPascalAbsolute", + "const": "kPaA", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kV": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KiloVolt", + "const": "kV", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kW": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Kilowatt", + "const": "kW", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kW h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Kilowatthour", + "const": "kW h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kat": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Katal", + "const": "kat", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kbps": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilobitsPerSecond", + "const": "kbps", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Kilocalorie", + "const": "kcal", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/(cm^2 min)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerSquareCentimeterMinute", + "const": "kcal/(cm^2 min)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/(cm^2 s)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerSquareCentimeterSecond", + "const": "kcal/(cm^2 s)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/(g °C)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerGramDegreeCelsius", + "const": "kcal/(g °C)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/(mol °C)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerMoleDegreeCelsius", + "const": "kcal/(mol °C)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerSquareCentimeter", + "const": "kcal/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/g": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerGram", + "const": "kcal/g", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerMinute", + "const": "kcal/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/mol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerMole", + "const": "kcal/mol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kcal/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilocaloriePerSecond", + "const": "kcal/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "keV": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KiloElectronVolt", + "const": "keV", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "keV/µm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KiloElectronVoltPerMicrometer", + "const": "keV/µm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Kilogram", + "const": "kg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg K": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramKelvin", + "const": "kg K", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg m s^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramMeterPerSecond", + "const": "kg m s^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg m^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramMeterSquared", + "const": "kg m^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg mol^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramPerMole", + "const": "kg mol^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg s^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramSecondSquared", + "const": "kg s^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerLiter", + "const": "kg/L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerSquareCentimeter", + "const": "kg/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/fL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerFemtoliter", + "const": "kg/fL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramPerHour", + "const": "kg/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramPerMeter", + "const": "kg/m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/mL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerMilliliter", + "const": "kg/mL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/m^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramPerSquareMeter", + "const": "kg/m^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/m^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramPerCubicMeter", + "const": "kg/m^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/nL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerNanoliter", + "const": "kg/nL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/pL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerPicoliter", + "const": "kg/pL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramPerSecond", + "const": "kg/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kg/μL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#KilogramPerMicroliter", + "const": "kg/μL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kgf": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramForce", + "const": "kgf", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kgf m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramForceMeter", + "const": "kgf m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kgf/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilogramForcePerSquareCentimeter", + "const": "kgf/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kip": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Kip", + "const": "kip", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kip/in^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KipPerSquareInch", + "const": "kip/in^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "km": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Kilometer", + "const": "km", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "km/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilometerPerHour", + "const": "km/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "km/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KilometerPerSecond", + "const": "km/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "km^3/s^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicKilometerPerSecondSquared", + "const": "km^3/s^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kn": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Knot", + "const": "kn", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kp": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KiloPond", + "const": "kp", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "kt/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#KnotPerSecond", + "const": "kt/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "l_P": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PlanckLength", + "const": "l_P", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb mol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundMole", + "const": "lb mol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb mol °F": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundMoleDegreeFahrenheit", + "const": "lb mol °F", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb-degF": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundDegreeFahrenheit", + "const": "lb-degF", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb-degR": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundDegreeRankine", + "const": "lb-degR", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/(ft-hr)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerFootHour", + "const": "lb/(ft-hr)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/(ft-s)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerFootSecond", + "const": "lb/(ft-s)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/ft": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerFoot", + "const": "lb/ft", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerSquareFoot", + "const": "lb/ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/ft^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerCubicFoot", + "const": "lb/ft^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/gal": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerGallon", + "const": "lb/gal", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/hr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerHour", + "const": "lb/hr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/in": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerInch", + "const": "lb/in", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/in^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerCubicInch", + "const": "lb/in^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerMinute", + "const": "lb/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb/yd^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerCubicYard", + "const": "lb/yd^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lb_av": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#AvoirdupoisPound", + "const": "lb_av", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForce", + "const": "lbf", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf / in^2-s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForcePerSquareInchSecond", + "const": "lbf / in^2-s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf-ft": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForceFoot", + "const": "lbf-ft", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf-in": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForceInch", + "const": "lbf-in", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf-s/ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForceSecondPerSquareFoot", + "const": "lbf-s/ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf-s/in^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForceSecondPerSquareInch", + "const": "lbf-s/in^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf/ft": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForcePerFoot", + "const": "lbf/ft", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf/ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForcePerSquareFoot", + "const": "lbf/ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf/in": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForcePerInch", + "const": "lbf/in", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf/lb": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundForcePerPound", + "const": "lbf/lb", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbf/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#FootPoundForceSecond", + "const": "lbf/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundMass", + "const": "lbm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbm (tr)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundTroy", + "const": "lbm (tr)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lbm/m^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PoundPerCubicMeter", + "const": "lbm/m^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lcwt": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HundredWeightLong", + "const": "lcwt", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Lumen", + "const": "lm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "lx": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Lux", + "const": "lx", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ly": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#LightYear", + "const": "ly", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Meter", + "const": "m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m K": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterKelvin", + "const": "m K", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m T": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TeslaMeter", + "const": "m T", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m V": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#VoltMeter", + "const": "m V", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m h^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterPerHour", + "const": "m h^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m min^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterPerMinute", + "const": "m min^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m s^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterPerSecond", + "const": "m s^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m s^-2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterPerSecondSquared", + "const": "m s^-2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m-kg": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterKilogram", + "const": "m-kg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m/F": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterPerFarad", + "const": "m/F", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m/K": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MeterPerKelvin", + "const": "m/K", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "m/z": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MassPerCharge", + "const": "m/z", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mA": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliAmpere", + "const": "mA", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mAU": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliAbsorbanceUnit", + "const": "mAU", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mAU.L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliAbsorbanceUnitTimesLiter", + "const": "mAU.L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mAU.mL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliAbsorbanceUnitTimesMilliliter", + "const": "mAU.mL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mAU.min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliAbsorbanceUnitTimesMinute", + "const": "mAU.min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mAU.s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliAbsorbanceUnitTimesSecond", + "const": "mAU.s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mArbU": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliArbitraryUnit", + "const": "mArbU", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mF/m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroFaradPerMeter", + "const": "mF/m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mF/m kHz": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroFaradPerMeterKiloHertz", + "const": "mF/m kHz", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mG": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Milligravity", + "const": "mG", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mH": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MilliHenry", + "const": "mH", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Milliliter", + "const": "mL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL/L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliliterPerLiter", + "const": "mL/L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL/kg": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliliterPerKilogram", + "const": "mL/kg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliliterPerMinute", + "const": "mL/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL/min^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliliterPerMinuteSquared", + "const": "mL/min^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliliterPerSecond", + "const": "mL/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mL/s^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MilliliterPerSecondSquared", + "const": "mL/s^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mM": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Millimolar", + "const": "mM", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mS/cm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MillisiemenPerCentimeter", + "const": "mS/cm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mT": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MetricTon", + "const": "mT", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mV": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Millivolt", + "const": "mV", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mV.L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MillivoltTimesLiter", + "const": "mV.L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "mV.s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MillivoltTimesSecond", + "const": "mV.s", + 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"required": [ + "unit" + ] + }, + "nm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Nanometer", + "const": "nm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "nmi/hr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#NauticalMilePerHour", + "const": "nmi/hr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "nmi/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#NauticalMilePerMinute", + "const": "nmi/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "nmol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Nanomole", + "const": "nmol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "nmol/dm^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Nanomolar", + "const": "nmol/dm^3", + "type": 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"http://qudt.org/vocab/unit#RevolutionPerSecond", + "const": "rev/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SecondTime", + "const": "s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "s T": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TeslaSecond", + "const": "s T", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "s ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SecondSquareFoot", + "const": "s ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "s^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PerSecond", + "const": "s^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "s^-1 T^-1": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PerTeslaSecond", + "const": "s^-1 T^-1", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "s^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SecondTimeSquared", + "const": "s^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "sb": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Stilb", + "const": "sb", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "scwt": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#HundredWeightShort", + "const": "scwt", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "slug": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Slug", + "const": "slug", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "slug/(ft s)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SlugPerFootSecond", + "const": "slug/(ft s)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "slug/ft": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SlugPerFoot", + "const": "slug/ft", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "slug/ft^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SlugPerSquareFoot", + "const": "slug/ft^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "slug/ft^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SlugPerCubicFoot", + "const": "slug/ft^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "slug/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SlugPerSecond", + "const": "slug/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "sr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Steradian", + "const": "sr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "st": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Stere", + "const": "st", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statA": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Statampere", + "const": "statA", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statC": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Statcoulomb", + "const": "statC", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statC/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#StatcoulombPerSquareCentimeter", + "const": "statC/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statC/mol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#StatcoulombPerMole", + "const": "statC/mol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statF": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Statfarad", + "const": "statF", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statH": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Stathenry", + "const": "statH", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statH/cm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#StathenryPerCentimeter", + "const": "statH/cm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statS": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Statmho", + "const": "statS", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statV": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Statvolt", + "const": "statV", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statV cm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#StatvoltCentimeter", + "const": "statV cm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statV/cm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#StatvoltPerCentimeter", + "const": "statV/cm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "statΩ": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Statohm", + "const": "statΩ", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "t/fg": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonOfRefrigeration", + "const": "t/fg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "t/lbf": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonEnergy", + "const": "t/lbf", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "t_P": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PlanckTime", + "const": "t_P", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "tbsp": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Tablespoon", + "const": "tbsp", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "tex": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Tex", + "const": "tex", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "therm (EC)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#ThermEEC", + "const": "therm (EC)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "therm (US)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#ThermUS", + "const": "therm (US)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "toe": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonOfOilEquivalent", + "const": "toe", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ton (l)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonLong", + "const": "ton (l)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ton (s)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonShort", + "const": "ton (s)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ton/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonShortPerHour", + "const": "ton/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ton/yd": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonShortPerCubicYard", + "const": "ton/yd", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "ton/yd^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#TonLongPerCubicYard", + "const": "ton/yd^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "torr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Torr", + "const": "torr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "tsp": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Teaspoon", + "const": "tsp", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "u": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Dalton2", + "const": "u", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "unitless": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Unitless", + "const": "unitless", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yd": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Yard", + "const": "yd", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yd^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#SquareYard", + "const": "yd^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yd^3": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicYard", + "const": "yd^3", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yd^3/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#CubicYardPerMinute", + "const": "yd^3/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Year365Day", + "const": "yr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yr (s)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#YearSidereal", + "const": "yr (s)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "yr (t)": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#YearTropical", + "const": "yr (t)", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeAngle", + "const": "°", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "° s^-2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreePerSecondSquared", + "const": "° s^-2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreePerHour", + "const": "°/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreePerMinute", + "const": "°/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreePerSecond", + "const": "°/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°C": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeCentigrade", + "const": "°C", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°C/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeCelsiusPerHour", + "const": "°C/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°C/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeCelsiusPerMinute", + "const": "°C/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°C/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeCelsiusPerSecond", + "const": "°C/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°F": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeFahrenheit", + "const": "°F", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°F h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeFahrenheitHour", + "const": "°F h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°F h/Btu": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeFahrenheitHourPerBtu", + "const": "°F h/Btu", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°F/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeFahrenheitPerHour", + "const": "°F/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°F/m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeFahrenheitPerMinute", + "const": "°F/m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°F/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeFahrenheitPerSecond", + "const": "°F/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°R": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeRankine", + "const": "°R", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°R/h": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeRankinePerHour", + "const": "°R/h", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°R/m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeRankinePerMinute", + "const": "°R/m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "°R/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#DegreeRankinePerSecond", + "const": "°R/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µG": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Microgravity", + "const": "µG", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µH": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MicroHenry", + "const": "µH", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µL/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroliterPerMinute", + "const": "µL/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µL/s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroliterPerSecond", + "const": "µL/s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µV": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Microvolt", + "const": "µV", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µW": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroWatt", + "const": "µW", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µW/g": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroWattPerGram", + "const": "µW/g", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µcal/°C": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroCaloriePerDegreeCelsius", + "const": "µcal/°C", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µin": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MicroInch", + "const": "µin", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Micrometer", + "const": "µm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#SquareMicrometer", + "const": "µm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µs": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MicroSecond", + "const": "µs", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "µtorr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#MicroTorr", + "const": "µtorr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Å": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Angstrom", + "const": "Å", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Å^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#SquareAngstrom", + "const": "Å^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Θ_P": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#PlanckTemperature", + "const": "Θ_P", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Ω": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Ohm", + "const": "Ω", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "Ω m": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#OhmMeter", + "const": "Ω m", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "εr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#RelativePermittivity", + "const": "εr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Microliter", + "const": "μL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μM": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Micromolar", + "const": "μM", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μS/cm": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroSiemensPerCentimeter", + "const": "μS/cm", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μV.s": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicroVoltTimesSecond", + "const": "μV.s", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Microgram", + "const": "μg", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/L": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerLiter", + "const": "μg/L", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/cm^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerSquareCentimeter", + "const": "μg/cm^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/fL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerFemtoliter", + "const": "μg/fL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/mL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerMilliliter", + "const": "μg/mL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/m^2": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerSquareMeter", + "const": "μg/m^2", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/min": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerMinute", + "const": "μg/min", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/nL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerNanoliter", + "const": "μg/nL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/pL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerPicoliter", + "const": "μg/pL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μg/μL": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#MicrogramPerMicroliter", + "const": "μg/μL", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μmol": { + "properties": { + "unit": { + "$asm.unit-iri": "http://purl.allotrope.org/ontology/qudt-ext/unit#Micromole", + "const": "μmol", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "μr": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#RelativePermeability", + "const": "μr", + "type": "string" + } + }, + "required": [ + "unit" + ] + }, + "€": { + "properties": { + "unit": { + "$asm.unit-iri": "http://qudt.org/vocab/unit#Euro", + "const": "€", + "type": "string" + } + }, + "required": [ + "unit" + ] + } + }, + "$id": "http://purl.allotrope.org/json-schemas/qudt/REC/2026/03/units.schema", + "$schema": "https://json-schema.org/draft/2020-12/schema" +} \ No newline at end of file diff --git a/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_data_creator.py b/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_data_creator.py index 38883603c4..d113ee5b3b 100644 --- a/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_data_creator.py +++ b/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_data_creator.py @@ -6,7 +6,7 @@ NaN, ) from allotropy.allotrope.models.shared.definitions.units import UNITLESS -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ( +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ( CalculatedData, CalculatedDataItem, DataSource, diff --git a/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_parser.py b/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_parser.py index 12d0b6518d..a5e430acc1 100644 --- a/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_parser.py +++ b/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_parser.py @@ -1,5 +1,5 @@ -from allotropy.allotrope.models.adm.pcr.rec._2024._09.qpcr import Model -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import Data, Mapper +from allotropy.allotrope.models.adm.pcr.rec._2026._03.qpcr import Model +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import Data, Mapper from allotropy.named_file_contents import NamedFileContents from allotropy.parsers.appbio_quantstudio.appbio_quantstudio_calculated_documents import ( iter_calculated_data_documents, diff --git a/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_structure.py b/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_structure.py index 78babb0fad..9351deed86 100644 --- a/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_structure.py +++ b/src/allotropy/parsers/appbio_quantstudio/appbio_quantstudio_structure.py @@ -7,7 +7,7 @@ import pandas as pd -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import SampleRoleType +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import SampleRoleType from allotropy.exceptions import AllotropeConversionError from allotropy.parsers.appbio_quantstudio.appbio_quantstudio_reader import ( AppBioQuantStudioReader, diff --git a/src/allotropy/parsers/appbio_quantstudio/constants.py b/src/allotropy/parsers/appbio_quantstudio/constants.py index d3ee066653..18062f08b7 100644 --- a/src/allotropy/parsers/appbio_quantstudio/constants.py +++ b/src/allotropy/parsers/appbio_quantstudio/constants.py @@ -1,6 +1,6 @@ from enum import Enum -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ( +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ( ContainerType, SampleRoleType, ) diff --git a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_data_creator.py b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_data_creator.py index b60a978931..e3d11c5aa4 100644 --- a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_data_creator.py +++ b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_data_creator.py @@ -5,7 +5,7 @@ NaN, ) from allotropy.allotrope.models.shared.definitions.units import UNITLESS -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ( +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ( CalculatedData, CalculatedDataItem, DataSource, diff --git a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_parser.py b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_parser.py index fc117f40fe..3495c0f93e 100644 --- a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_parser.py +++ b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/appbio_quantstudio_designandanalysis_parser.py @@ -1,5 +1,5 @@ -from allotropy.allotrope.models.adm.pcr.rec._2024._09.qpcr import Model -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ( +from allotropy.allotrope.models.adm.pcr.rec._2026._03.qpcr import Model +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ( Data, Mapper, ) diff --git a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/constants.py b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/constants.py index cbfaf103d6..686f41d29a 100644 --- a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/constants.py +++ b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/constants.py @@ -1,6 +1,6 @@ from enum import Enum -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ContainerType +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ContainerType # Experiment type was an enum in the BENCHLING/2023/09 version of the qpcr schema, but diff --git a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/structure/generic/structure.py b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/structure/generic/structure.py index 68390f8414..e8f03ac7ee 100644 --- a/src/allotropy/parsers/appbio_quantstudio_designandanalysis/structure/generic/structure.py +++ b/src/allotropy/parsers/appbio_quantstudio_designandanalysis/structure/generic/structure.py @@ -8,7 +8,7 @@ import pandas as pd -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import SampleRoleType +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import SampleRoleType from allotropy.exceptions import AllotropeConversionError from allotropy.parsers.appbio_quantstudio.appbio_quantstudio_structure import ( AmplificationData, diff --git a/src/allotropy/parsers/cfxmaestro/cfxmaestro_parser.py b/src/allotropy/parsers/cfxmaestro/cfxmaestro_parser.py index f902044524..ad983d9e84 100644 --- a/src/allotropy/parsers/cfxmaestro/cfxmaestro_parser.py +++ b/src/allotropy/parsers/cfxmaestro/cfxmaestro_parser.py @@ -1,5 +1,5 @@ -from allotropy.allotrope.models.adm.pcr.rec._2024._09.qpcr import Model -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import Data, Mapper +from allotropy.allotrope.models.adm.pcr.rec._2026._03.qpcr import Model +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import Data, Mapper from allotropy.named_file_contents import NamedFileContents from allotropy.parsers.cfxmaestro.cfxmaestro_reader import ( CFXMaestroReader, diff --git a/src/allotropy/parsers/cfxmaestro/cfxmaestro_structure.py b/src/allotropy/parsers/cfxmaestro/cfxmaestro_structure.py index fde78b6dcb..eb726a9ec7 100644 --- a/src/allotropy/parsers/cfxmaestro/cfxmaestro_structure.py +++ b/src/allotropy/parsers/cfxmaestro/cfxmaestro_structure.py @@ -5,7 +5,7 @@ import pandas as pd -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ( +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ( Error, Measurement, MeasurementGroup, diff --git a/src/allotropy/parsers/cfxmaestro/constants.py b/src/allotropy/parsers/cfxmaestro/constants.py index 0fd7a30a41..bc7828dd42 100644 --- a/src/allotropy/parsers/cfxmaestro/constants.py +++ b/src/allotropy/parsers/cfxmaestro/constants.py @@ -1,4 +1,4 @@ -from allotropy.allotrope.schema_mappers.adm.pcr.rec._2024._09.qpcr import ( +from allotropy.allotrope.schema_mappers.adm.pcr.rec._2026._03.qpcr import ( ContainerType, SampleRoleType, ) diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example01.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example01.json index e6a3ad75e8..8c9017504b 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example01.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example01.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -130,7 +130,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -274,7 +275,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -418,7 +420,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -562,7 +565,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -706,7 +710,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -850,7 +855,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -994,7 +1000,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1137,7 +1144,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1219,7 +1227,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1301,7 +1310,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1383,7 +1393,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1465,7 +1476,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1547,7 +1559,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1629,7 +1642,8 @@ } ] }, - "target DNA description": "TARGET_1" + "target DNA description": "TARGET_1", + "experimental data identifier": "trial 1" } ], "experimental data identifier": "trial 1", @@ -1880,7 +1894,7 @@ "file name": "appbio_quantstudio_example01.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example01.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example02.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example02.json index ef91ff2d29..2c136fce36 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example02.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example02.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -205,7 +205,8 @@ [1591197.5, 1686956.6, 1686795.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -415,7 +416,8 @@ [1591197.5, 1686956.6, 1686795.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -628,7 +630,8 @@ [1585934.1, 1663210.4, 1661918.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -838,7 +841,8 @@ [1585934.1, 1663210.4, 1661918.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -1052,7 +1056,8 @@ [1591662.0, 1672514.1, 1671533.2] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -1260,7 +1265,8 @@ [1591662.0, 1672514.1, 1671533.2] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -1403,7 +1409,8 @@ [1559088.1, 1632193.2, 1630451.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -1525,7 +1532,8 @@ [1559088.1, 1632193.2, 1630451.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -1668,7 +1676,8 @@ [1612501.5, 1682672.9, 1681406.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -1790,7 +1799,8 @@ [1612501.5, 1682672.9, 1681406.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -1933,7 +1943,8 @@ [1467891.0, 1542644.8, 1541404.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -2055,7 +2066,8 @@ [1467891.0, 1542644.8, 1541404.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -2198,7 +2210,8 @@ [1483110.2, 1549247.8, 1548575.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -2324,7 +2337,8 @@ [1483110.2, 1549247.8, 1548575.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -2467,7 +2481,8 @@ [1465250.2, 1534323.8, 1531870.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -2593,7 +2608,8 @@ [1465250.2, 1534323.8, 1531870.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -2736,7 +2752,8 @@ [1489896.5, 1552026.0, 1549715.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -2862,7 +2879,8 @@ [1489896.5, 1552026.0, 1549715.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -3005,7 +3023,8 @@ [1522090.1, 1600021.6, 1597810.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -3131,7 +3150,8 @@ [1522090.1, 1600021.6, 1597810.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -3274,7 +3294,8 @@ [1416970.0, 1533270.9, 1531060.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -3400,7 +3421,8 @@ [1416970.0, 1533270.9, 1531060.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -3543,7 +3565,8 @@ [1472113.1, 1559103.2, 1557079.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -3669,7 +3692,8 @@ [1472113.1, 1559103.2, 1557079.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -3807,7 +3831,8 @@ [1522685.0, 1597333.0, 1595266.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -3929,7 +3954,8 @@ [1522685.0, 1597333.0, 1595266.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -4072,7 +4098,8 @@ [1524225.4, 1614159.1, 1615069.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -4194,7 +4221,8 @@ [1524225.4, 1614159.1, 1615069.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -4337,7 +4365,8 @@ [1466183.9, 1539779.8, 1538714.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -4459,7 +4488,8 @@ [1466183.9, 1539779.8, 1538714.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -4602,7 +4632,8 @@ [1511149.1, 1589415.5, 1588596.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -4724,7 +4755,8 @@ [1511149.1, 1589415.5, 1588596.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -4867,7 +4899,8 @@ [1533663.1, 1610478.5, 1609976.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -4989,7 +5022,8 @@ [1533663.1, 1610478.5, 1609976.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -5132,7 +5166,8 @@ [1447727.2, 1511981.6, 1510436.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -5254,7 +5289,8 @@ [1447727.2, 1511981.6, 1510436.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -5397,7 +5433,8 @@ [1457538.2, 1520130.0, 1519968.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -5523,7 +5560,8 @@ [1457538.2, 1520130.0, 1519968.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -5666,7 +5704,8 @@ [1490318.5, 1554000.5, 1552460.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -5792,7 +5831,8 @@ [1490318.5, 1554000.5, 1552460.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -5935,7 +5975,8 @@ [1625392.2, 1684990.0, 1681833.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -6061,7 +6102,8 @@ [1625392.2, 1684990.0, 1681833.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -6204,7 +6246,8 @@ [1465114.8, 1531602.0, 1529957.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -6330,7 +6373,8 @@ [1465114.8, 1531602.0, 1529957.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -6473,7 +6517,8 @@ [1380044.2, 1455822.2, 1454129.2] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -6599,7 +6644,8 @@ [1380044.2, 1455822.2, 1454129.2] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -6742,7 +6788,8 @@ [1521913.2, 1605523.9, 1603345.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -6868,7 +6915,8 @@ [1521913.2, 1605523.9, 1603345.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -7006,7 +7054,8 @@ [1455540.1, 1602744.1, 1604393.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -7128,7 +7177,8 @@ [1455540.1, 1602744.1, 1604393.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -7271,7 +7321,8 @@ [1511584.9, 1602361.4, 1602817.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -7393,7 +7444,8 @@ [1511584.9, 1602361.4, 1602817.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -7536,7 +7588,8 @@ [1530586.9, 1612538.9, 1611266.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -7658,7 +7711,8 @@ [1530586.9, 1612538.9, 1611266.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -7801,7 +7855,8 @@ [1512240.8, 1580506.5, 1579369.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -7923,7 +7978,8 @@ [1512240.8, 1580506.5, 1579369.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -8066,7 +8122,8 @@ [1545791.5, 1616114.1, 1615912.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -8188,7 +8245,8 @@ [1545791.5, 1616114.1, 1615912.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -8331,7 +8389,8 @@ [1510440.8, 1570699.4, 1568188.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -8453,7 +8512,8 @@ [1510440.8, 1570699.4, 1568188.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -8596,7 +8656,8 @@ [1519390.8, 1578241.8, 1575727.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -8722,7 +8783,8 @@ [1519390.8, 1578241.8, 1575727.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -8865,7 +8927,8 @@ [1515300.9, 1578979.1, 1578220.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -8991,7 +9054,8 @@ [1515300.9, 1578979.1, 1578220.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -9134,7 +9198,8 @@ [1530466.8, 1598767.6, 1596711.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -9260,7 +9325,8 @@ [1530466.8, 1598767.6, 1596711.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -9403,7 +9469,8 @@ [1516336.6, 1588335.8, 1587692.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -9529,7 +9596,8 @@ [1516336.6, 1588335.8, 1587692.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -9672,7 +9740,8 @@ [1399896.2, 1471539.1, 1468343.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -9798,7 +9867,8 @@ [1399896.2, 1471539.1, 1468343.4] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -9941,7 +10011,8 @@ [1561080.8, 1646065.8, 1644497.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -10067,7 +10138,8 @@ [1561080.8, 1646065.8, 1644497.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -10205,7 +10277,8 @@ [1402552.4, 1481017.2, 1480385.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -10327,7 +10400,8 @@ [1402552.4, 1481017.2, 1480385.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -10470,7 +10544,8 @@ [1420402.1, 1500625.0, 1498755.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -10592,7 +10667,8 @@ [1420402.1, 1500625.0, 1498755.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -10735,7 +10811,8 @@ [1436204.8, 1506162.8, 1505213.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -10857,7 +10934,8 @@ [1436204.8, 1506162.8, 1505213.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -11000,7 +11078,8 @@ [1455615.8, 1515131.5, 1512834.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -11122,7 +11201,8 @@ [1455615.8, 1515131.5, 1512834.6] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -11265,7 +11345,8 @@ [1474651.2, 1531142.5, 1528988.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -11387,7 +11468,8 @@ [1474651.2, 1531142.5, 1528988.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -11530,7 +11612,8 @@ [1401536.6, 1458119.4, 1457518.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -11652,7 +11735,8 @@ [1401536.6, 1458119.4, 1457518.0] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -11795,7 +11879,8 @@ [1401829.0, 1444664.0, 1442418.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -11921,7 +12006,8 @@ [1401829.0, 1444664.0, 1442418.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -12064,7 +12150,8 @@ [1481007.2, 1531829.9, 1528991.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -12190,7 +12277,8 @@ [1481007.2, 1531829.9, 1528991.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -12333,7 +12421,8 @@ [1515010.4, 1576655.8, 1575000.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -12459,7 +12548,8 @@ [1515010.4, 1576655.8, 1575000.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -12602,7 +12692,8 @@ [1511684.4, 1574023.6, 1572318.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -12728,7 +12819,8 @@ [1511684.4, 1574023.6, 1572318.8] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -12871,7 +12963,8 @@ [1411749.9, 1486709.5, 1484317.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -12997,7 +13090,8 @@ [1411749.9, 1486709.5, 1484317.1] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -13140,7 +13234,8 @@ [1580745.9, 1665525.0, 1663290.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -13266,7 +13361,8 @@ [1580745.9, 1665525.0, 1663290.9] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -16381,7 +16477,7 @@ "file name": "appbio_quantstudio_example02.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example02.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example03.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example03.json index e9335641f9..5122d36020 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example03.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example03.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -153,7 +153,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -297,7 +298,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -457,7 +459,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -597,7 +600,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -759,7 +763,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -898,7 +903,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -991,7 +997,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -1060,7 +1067,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -1153,7 +1161,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -1222,7 +1231,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -1315,7 +1325,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -1384,7 +1395,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -1477,7 +1489,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -1546,7 +1559,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -1639,7 +1653,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -1708,7 +1723,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -1801,7 +1817,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -1870,7 +1887,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -1963,7 +1981,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2032,7 +2051,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -2125,7 +2145,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2194,7 +2215,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -2287,7 +2309,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2356,7 +2379,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -2445,7 +2469,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2510,7 +2535,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -2603,7 +2629,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2672,7 +2699,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -2765,7 +2793,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2834,7 +2863,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -2927,7 +2957,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -2996,7 +3027,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -3089,7 +3121,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -3158,7 +3191,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -3251,7 +3285,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -3320,7 +3355,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -3413,7 +3449,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -3482,7 +3519,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -3575,7 +3613,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -3644,7 +3683,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -3737,7 +3777,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -3806,7 +3847,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -3899,7 +3941,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -3968,7 +4011,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -4061,7 +4105,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -4130,7 +4175,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -4223,7 +4269,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -4292,7 +4339,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -4381,7 +4429,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -4446,7 +4495,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -4539,7 +4589,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -4608,7 +4659,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -4701,7 +4753,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -4770,7 +4823,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -4863,7 +4917,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -4932,7 +4987,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5025,7 +5081,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -5094,7 +5151,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5187,7 +5245,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -5256,7 +5315,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5349,7 +5409,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -5418,7 +5479,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5511,7 +5573,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -5580,7 +5643,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5673,7 +5737,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -5742,7 +5807,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5835,7 +5901,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -5904,7 +5971,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -5997,7 +6065,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -6066,7 +6135,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -6159,7 +6229,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -6228,7 +6299,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -6317,7 +6389,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -6382,7 +6455,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -6475,7 +6549,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -6544,7 +6619,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -6637,7 +6713,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -6706,7 +6783,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -6799,7 +6877,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -6868,7 +6947,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -6961,7 +7041,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -7030,7 +7111,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -7123,7 +7205,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -7192,7 +7275,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -7285,7 +7369,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -7354,7 +7439,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -7447,7 +7533,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -7516,7 +7603,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -7609,7 +7697,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -7678,7 +7767,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -7771,7 +7861,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -7840,7 +7931,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -7933,7 +8025,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8002,7 +8095,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -8095,7 +8189,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8164,7 +8259,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -8253,7 +8349,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8318,7 +8415,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -8411,7 +8509,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8480,7 +8579,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -8573,7 +8673,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8642,7 +8743,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -8735,7 +8837,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8804,7 +8907,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -8897,7 +9001,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -8966,7 +9071,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -9059,7 +9165,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -9128,7 +9235,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -9221,7 +9329,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -9290,7 +9399,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -9383,7 +9493,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -9452,7 +9563,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -9545,7 +9657,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -9614,7 +9727,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -9707,7 +9821,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -9776,7 +9891,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -9869,7 +9985,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -9938,7 +10055,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10031,7 +10149,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -10100,7 +10219,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10189,7 +10309,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -10254,7 +10375,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10347,7 +10469,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -10416,7 +10539,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10509,7 +10633,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -10578,7 +10703,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10671,7 +10797,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -10740,7 +10867,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10833,7 +10961,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -10902,7 +11031,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -10995,7 +11125,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -11064,7 +11195,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -11157,7 +11289,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -11226,7 +11359,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -11319,7 +11453,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -11388,7 +11523,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -11481,7 +11617,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -11550,7 +11687,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -11643,7 +11781,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -11712,7 +11851,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -11805,7 +11945,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -11874,7 +12015,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -11967,7 +12109,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -12036,7 +12179,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -12125,7 +12269,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -12190,7 +12335,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -12283,7 +12429,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -12352,7 +12499,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -12445,7 +12593,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -12514,7 +12663,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -12607,7 +12757,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -12676,7 +12827,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -12769,7 +12921,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -12838,7 +12991,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -12931,7 +13085,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13000,7 +13155,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -13093,7 +13249,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13162,7 +13319,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -13255,7 +13413,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13324,7 +13483,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -13417,7 +13577,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13486,7 +13647,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -13579,7 +13741,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13648,7 +13811,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -13741,7 +13905,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13810,7 +13975,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -13903,7 +14069,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -13972,7 +14139,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -14061,7 +14229,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -14126,7 +14295,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -14219,7 +14389,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -14288,7 +14459,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -14381,7 +14553,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -14450,7 +14623,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -14543,7 +14717,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -14612,7 +14787,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -14705,7 +14881,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -14774,7 +14951,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -14867,7 +15045,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -14936,7 +15115,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15029,7 +15209,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -15098,7 +15279,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15191,7 +15373,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -15260,7 +15443,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15353,7 +15537,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -15422,7 +15607,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15515,7 +15701,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -15584,7 +15771,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15677,7 +15865,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -15746,7 +15935,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15839,7 +16029,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -15908,7 +16099,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -15931,7 +16123,7 @@ "file name": "appbio_quantstudio_example03.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example03.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example04.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example04.json index b87d84989a..ad41106058 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example04.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example04.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -135,7 +135,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -285,7 +286,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -434,7 +436,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -584,7 +587,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -731,7 +735,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -879,7 +884,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -957,7 +963,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1035,7 +1042,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1113,7 +1121,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1191,7 +1200,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1269,7 +1279,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1347,7 +1358,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1425,7 +1437,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1503,7 +1516,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1581,7 +1595,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1659,7 +1674,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1737,7 +1753,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1815,7 +1832,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1893,7 +1911,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1971,7 +1990,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2049,7 +2069,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2127,7 +2148,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2205,7 +2227,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2283,7 +2306,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2361,7 +2385,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2439,7 +2464,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2517,7 +2543,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2595,7 +2622,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2673,7 +2701,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2751,7 +2780,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2829,7 +2859,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2907,7 +2938,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -2985,7 +3017,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3063,7 +3096,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3141,7 +3175,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3219,7 +3254,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3292,7 +3328,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3365,7 +3402,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3438,7 +3476,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3511,7 +3550,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3589,7 +3629,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3667,7 +3708,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3745,7 +3787,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3823,7 +3866,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3901,7 +3945,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -3979,7 +4024,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4057,7 +4103,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4135,7 +4182,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4213,7 +4261,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4291,7 +4340,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4369,7 +4419,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4447,7 +4498,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4525,7 +4577,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4603,7 +4656,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4681,7 +4735,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4759,7 +4814,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4837,7 +4893,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4915,7 +4972,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -4993,7 +5051,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5071,7 +5130,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5149,7 +5209,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5227,7 +5288,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5305,7 +5367,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5383,7 +5446,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5461,7 +5525,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5539,7 +5604,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5617,7 +5683,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5695,7 +5762,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5773,7 +5841,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5851,7 +5920,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -5929,7 +5999,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6007,7 +6078,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6085,7 +6157,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6163,7 +6236,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6241,7 +6315,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6319,7 +6394,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6397,7 +6473,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6475,7 +6552,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6553,7 +6631,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6631,7 +6710,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6709,7 +6789,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6787,7 +6868,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6865,7 +6947,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -6943,7 +7026,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7021,7 +7105,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7099,7 +7184,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7177,7 +7263,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7255,7 +7342,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7333,7 +7421,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7411,7 +7500,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7489,7 +7579,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7567,7 +7658,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7645,7 +7737,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7723,7 +7816,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -7801,7 +7895,8 @@ } ] }, - "target DNA description": "RNase P" + "target DNA description": "RNase P", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -14524,7 +14619,7 @@ "file name": "appbio_quantstudio_example04.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example04.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example05.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example05.json index 915ea805b6..491bf48221 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example05.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example05.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -123,7 +123,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -260,7 +261,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -335,7 +337,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -358,7 +361,7 @@ "file name": "appbio_quantstudio_example05.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example05.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example06.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example06.json index b569f0c9e8..5b9c31d705 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example06.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example06.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -126,7 +126,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -268,7 +269,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -408,7 +410,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -548,7 +551,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -688,7 +692,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -828,7 +833,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -968,7 +974,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -1108,7 +1115,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -1248,7 +1256,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -1947,7 +1956,7 @@ "file name": "appbio_quantstudio_example06.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example06.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example07.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example07.json index d0631628ea..22cc36398a 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example07.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example07.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -124,7 +124,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -266,7 +267,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -409,7 +411,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -552,7 +555,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -695,7 +699,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -838,7 +843,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -976,7 +982,8 @@ } ] }, - "target DNA description": "IPC" + "target DNA description": "IPC", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1119,7 +1126,8 @@ } ] }, - "target DNA description": "IPC" + "target DNA description": "IPC", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1200,7 +1208,8 @@ } ] }, - "target DNA description": "IPC" + "target DNA description": "IPC", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1281,7 +1290,8 @@ } ] }, - "target DNA description": "IPC" + "target DNA description": "IPC", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1362,7 +1372,8 @@ } ] }, - "target DNA description": "IPC" + "target DNA description": "IPC", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1443,7 +1454,8 @@ } ] }, - "target DNA description": "IPC" + "target DNA description": "IPC", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1519,7 +1531,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1600,7 +1613,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1681,7 +1695,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -1762,7 +1777,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example 2", @@ -2821,7 +2837,7 @@ "file name": "appbio_quantstudio_example07.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example07.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example08.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example08.json index 49b6a23c74..7f2c8ddaf4 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example08.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example08.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -126,7 +126,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -254,7 +255,8 @@ } ] }, - "target DNA description": "TJP-1 Rhesus" + "target DNA description": "TJP-1 Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -394,7 +396,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -520,7 +523,8 @@ } ] }, - "target DNA description": "TJP-1 Rhesus" + "target DNA description": "TJP-1 Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -660,7 +664,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -786,7 +791,8 @@ } ] }, - "target DNA description": "TJP-1 Rhesus" + "target DNA description": "TJP-1 Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -926,7 +932,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1052,7 +1059,8 @@ } ] }, - "target DNA description": "TJP-1 Human" + "target DNA description": "TJP-1 Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1195,7 +1203,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1321,7 +1330,8 @@ } ] }, - "target DNA description": "TJP-1 Human" + "target DNA description": "TJP-1 Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1463,7 +1473,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1589,7 +1600,8 @@ } ] }, - "target DNA description": "TJP-1 Human" + "target DNA description": "TJP-1 Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1729,7 +1741,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1855,7 +1868,8 @@ } ] }, - "target DNA description": "AqP4- Rhesus" + "target DNA description": "AqP4- Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1995,7 +2009,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2121,7 +2136,8 @@ } ] }, - "target DNA description": "AqP4- Rhesus" + "target DNA description": "AqP4- Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -2261,7 +2277,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2393,7 +2410,8 @@ } ] }, - "target DNA description": "AqP4- Rhesus" + "target DNA description": "AqP4- Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -2533,7 +2551,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2659,7 +2678,8 @@ } ] }, - "target DNA description": "AQP4-Human" + "target DNA description": "AQP4-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -2799,7 +2819,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2925,7 +2946,8 @@ } ] }, - "target DNA description": "AQP4-Human" + "target DNA description": "AQP4-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3065,7 +3087,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3191,7 +3214,8 @@ } ] }, - "target DNA description": "AQP4-Human" + "target DNA description": "AQP4-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3331,7 +3355,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3457,7 +3482,8 @@ } ] }, - "target DNA description": "ANPEP-Rhesus" + "target DNA description": "ANPEP-Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3597,7 +3623,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3723,7 +3750,8 @@ } ] }, - "target DNA description": "ANPEP-Rhesus" + "target DNA description": "ANPEP-Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3869,7 +3897,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4013,7 +4042,8 @@ } ] }, - "target DNA description": "ANPEP-Rhesus" + "target DNA description": "ANPEP-Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -4161,7 +4191,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4305,7 +4336,8 @@ } ] }, - "target DNA description": "ANPEP-Human" + "target DNA description": "ANPEP-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -4445,7 +4477,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4581,7 +4614,8 @@ } ] }, - "target DNA description": "ANPEP-Human" + "target DNA description": "ANPEP-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -4725,7 +4759,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4869,7 +4904,8 @@ } ] }, - "target DNA description": "ANPEP-Human" + "target DNA description": "ANPEP-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -6480,7 +6516,7 @@ "file name": "appbio_quantstudio_example08.xlsx", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example08.xlsx", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example09.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example09.json index 3f9a7afbf4..82979b9a2f 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example09.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example09.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -125,7 +125,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -252,7 +253,8 @@ } ] }, - "target DNA description": "TJP-1 Rhesus" + "target DNA description": "TJP-1 Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -391,7 +393,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -516,7 +519,8 @@ } ] }, - "target DNA description": "TJP-1 Rhesus" + "target DNA description": "TJP-1 Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -655,7 +659,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -780,7 +785,8 @@ } ] }, - "target DNA description": "TJP-1 Rhesus" + "target DNA description": "TJP-1 Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -919,7 +925,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1044,7 +1051,8 @@ } ] }, - "target DNA description": "TJP-1 Human" + "target DNA description": "TJP-1 Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1186,7 +1194,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1311,7 +1320,8 @@ } ] }, - "target DNA description": "TJP-1 Human" + "target DNA description": "TJP-1 Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1452,7 +1462,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1577,7 +1588,8 @@ } ] }, - "target DNA description": "TJP-1 Human" + "target DNA description": "TJP-1 Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1716,7 +1728,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -1841,7 +1854,8 @@ } ] }, - "target DNA description": "AqP4- Rhesus" + "target DNA description": "AqP4- Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -1980,7 +1994,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2105,7 +2120,8 @@ } ] }, - "target DNA description": "AqP4- Rhesus" + "target DNA description": "AqP4- Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -2244,7 +2260,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2375,7 +2392,8 @@ } ] }, - "target DNA description": "AqP4- Rhesus" + "target DNA description": "AqP4- Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -2514,7 +2532,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2639,7 +2658,8 @@ } ] }, - "target DNA description": "AQP4-Human" + "target DNA description": "AQP4-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -2778,7 +2798,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -2903,7 +2924,8 @@ } ] }, - "target DNA description": "AQP4-Human" + "target DNA description": "AQP4-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3042,7 +3064,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3167,7 +3190,8 @@ } ] }, - "target DNA description": "AQP4-Human" + "target DNA description": "AQP4-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3306,7 +3330,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3431,7 +3456,8 @@ } ] }, - "target DNA description": "ANPEP-Rhesus" + "target DNA description": "ANPEP-Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3570,7 +3596,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3695,7 +3722,8 @@ } ] }, - "target DNA description": "ANPEP-Rhesus" + "target DNA description": "ANPEP-Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -3840,7 +3868,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -3983,7 +4012,8 @@ } ] }, - "target DNA description": "ANPEP-Rhesus" + "target DNA description": "ANPEP-Rhesus", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -4130,7 +4160,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4273,7 +4304,8 @@ } ] }, - "target DNA description": "ANPEP-Human" + "target DNA description": "ANPEP-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -4412,7 +4444,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4547,7 +4580,8 @@ } ] }, - "target DNA description": "ANPEP-Human" + "target DNA description": "ANPEP-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -4690,7 +4724,8 @@ } ] }, - "target DNA description": "18S" + "target DNA description": "18S", + "experimental data identifier": "2022-08-12 145003" }, { "device control aggregate document": { @@ -4833,7 +4868,8 @@ } ] }, - "target DNA description": "ANPEP-Human" + "target DNA description": "ANPEP-Human", + "experimental data identifier": "2022-08-12 145003" } ], "experimental data identifier": "2022-08-12 145003", @@ -6444,7 +6480,7 @@ "file name": "appbio_quantstudio_example09.xlsx", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_example09.xlsx", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_broken_path_calc_doc.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_broken_path_calc_doc.json index 1ee15e6e96..f1f187bd61 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_broken_path_calc_doc.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_broken_path_calc_doc.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -126,7 +126,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example", @@ -217,7 +218,7 @@ "file name": "appbio_quantstudio_minimal_broken_path_calc_doc.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_broken_path_calc_doc.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_missing_results.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_missing_results.json index e578729a4f..7f0c4f2c51 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_missing_results.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_missing_results.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -136,7 +136,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -262,7 +263,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -285,7 +287,7 @@ "file name": "appbio_quantstudio_minimal_missing_results.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_missing_results.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test01.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test01.json index cd964a14b2..c1480527ce 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test01.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test01.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -184,7 +184,8 @@ [1591197.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" }, { "device control aggregate document": { @@ -366,7 +367,8 @@ [1591197.5] ] } - } + }, + "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example" } ], "experimental data identifier": "QuantStudio 96-Well Presence-Absence Example", @@ -457,7 +459,7 @@ "file name": "appbio_quantstudio_minimal_test01.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test01.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test02.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test02.json index 0f1fd9172e..1f56508cc8 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test02.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test02.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -215,7 +215,8 @@ [0.093] ] } - } + }, + "experimental data identifier": "200224 U251p14 200217_14v9_SEMA3F_trial 1" } ], "experimental data identifier": "200224 U251p14 200217_14v9_SEMA3F_trial 1", @@ -258,7 +259,7 @@ "file name": "appbio_quantstudio_minimal_test02.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test02.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test03.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test03.json index 211f461dfc..bfc13d6fbb 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test03.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test03.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -136,7 +136,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 1" + "target DNA description": "CYP19_2-Allele 1", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" }, { "device control aggregate document": { @@ -262,7 +263,8 @@ } ] }, - "target DNA description": "CYP19_2-Allele 2" + "target DNA description": "CYP19_2-Allele 2", + "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example" } ], "experimental data identifier": "QuantStudio 96-Well SNP Genotyping Example", @@ -285,7 +287,7 @@ "file name": "appbio_quantstudio_minimal_test03.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test03.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test04.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test04.json index 0f36506b54..417c5e0cb8 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test04.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test04.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -126,7 +126,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example", @@ -268,7 +269,8 @@ } ] }, - "target DNA description": "RNaseP" + "target DNA description": "RNaseP", + "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example" } ], "experimental data identifier": "QuantStudio96-Well Relative Standard Curve Example", @@ -615,7 +617,7 @@ "file name": "appbio_quantstudio_minimal_test04.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test04.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test07.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test07.json index e297ddad10..a20ec3bba8 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test07.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test07.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -126,7 +126,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -268,7 +269,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -408,7 +410,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -548,7 +551,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -688,7 +692,8 @@ } ] }, - "target DNA description": "TGF-B" + "target DNA description": "TGF-B", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -828,7 +833,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -968,7 +974,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -1108,7 +1115,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -1248,7 +1256,8 @@ } ] }, - "target DNA description": "GAPDH" + "target DNA description": "GAPDH", + "experimental data identifier": "QuantStudio96-Well Comparative Ct Example" } ], "experimental data identifier": "QuantStudio96-Well Comparative Ct Example", @@ -1947,7 +1956,7 @@ "file name": "appbio_quantstudio_minimal_test07.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_minimal_test07.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_multiple_cal_doc_wells.json b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_multiple_cal_doc_wells.json index 8f3e27e570..91bbfdcaaf 100644 --- a/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_multiple_cal_doc_wells.json +++ b/tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_multiple_cal_doc_wells.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -122,7 +122,8 @@ } ] }, - "target DNA description": "GROUP1" + "target DNA description": "GROUP1", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" }, { "device control aggregate document": { @@ -241,7 +242,8 @@ } ] }, - "target DNA description": "GROUP2" + "target DNA description": "GROUP2", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -377,7 +379,8 @@ } ] }, - "target DNA description": "GROUP1" + "target DNA description": "GROUP1", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" }, { "device control aggregate document": { @@ -496,7 +499,8 @@ } ] }, - "target DNA description": "GROUP2" + "target DNA description": "GROUP2", + "experimental data identifier": "QuantStudio 96-Well Standard Curve Example" } ], "experimental data identifier": "QuantStudio 96-Well Standard Curve Example", @@ -1067,7 +1071,7 @@ "file name": "appbio_quantstudio_multiple_cal_doc_wells.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/appbio_quantstudio_multiple_cal_doc_wells.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio/testdata/example_quantsudio_results_only.json b/tests/parsers/appbio_quantstudio/testdata/example_quantsudio_results_only.json index 9dab64d40a..5bd17c3179 100644 --- a/tests/parsers/appbio_quantstudio/testdata/example_quantsudio_results_only.json +++ b/tests/parsers/appbio_quantstudio/testdata/example_quantsudio_results_only.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -88,7 +88,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -198,7 +199,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -308,7 +310,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -418,7 +421,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -528,7 +532,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -638,7 +643,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -748,7 +754,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -858,7 +865,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -968,7 +976,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1078,7 +1087,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1188,7 +1198,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1298,7 +1309,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1408,7 +1420,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1518,7 +1531,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1628,7 +1642,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1738,7 +1753,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1848,7 +1864,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -1958,7 +1975,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -2068,7 +2086,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -2178,7 +2197,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -2288,7 +2308,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -2398,7 +2419,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -2508,7 +2530,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -2618,7 +2641,8 @@ } ] }, - "target DNA description": "3'UTR" + "target DNA description": "3'UTR", + "experimental data identifier": "01OCT2024" } ], "experimental data identifier": "01OCT2024", @@ -4813,7 +4837,7 @@ "file name": "example_quantsudio_results_only.txt", "UNC path": "tests/parsers/appbio_quantstudio/testdata/example_quantsudio_results_only.txt", "ASM converter name": "allotropy_appbio_quantstudio_rt_pcr", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "Thermo QuantStudio", "software version": "1.0" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example15_v1.5.2.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example15_v1.5.2.json index b29a98e210..22d0378dcd 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example15_v1.5.2.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example15_v1.5.2.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -143,7 +143,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -301,7 +302,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -457,7 +459,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -614,7 +617,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -773,7 +777,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -929,7 +934,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1088,7 +1094,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1244,7 +1251,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1400,7 +1408,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1558,7 +1567,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1721,7 +1731,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1882,7 +1893,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2032,7 +2044,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2184,7 +2197,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2334,7 +2348,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2489,7 +2504,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2637,7 +2653,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2791,7 +2808,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2942,7 +2960,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3093,7 +3112,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3254,7 +3274,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3413,7 +3434,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3573,7 +3595,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3731,7 +3754,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3889,7 +3913,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4047,7 +4072,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4204,7 +4230,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4363,7 +4390,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4522,7 +4550,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4683,7 +4712,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4840,7 +4870,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5000,7 +5031,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5153,7 +5185,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5309,7 +5342,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5458,7 +5492,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5610,7 +5645,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5771,7 +5807,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5933,7 +5970,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6094,7 +6132,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6253,7 +6292,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6411,7 +6451,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6568,7 +6609,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6725,7 +6767,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6882,7 +6925,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7039,7 +7083,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7197,7 +7242,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7356,7 +7402,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7516,7 +7563,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7674,7 +7722,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7828,7 +7877,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7982,7 +8032,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8137,7 +8188,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8284,7 +8336,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8447,7 +8500,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8615,7 +8669,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8788,7 +8843,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8948,7 +9004,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9105,7 +9162,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9263,7 +9321,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9420,7 +9479,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9578,7 +9638,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9735,7 +9796,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9894,7 +9956,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10052,7 +10115,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10213,7 +10277,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10370,7 +10435,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10530,7 +10596,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10689,7 +10756,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10841,7 +10909,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10994,7 +11063,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11143,7 +11213,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11293,7 +11364,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11451,7 +11523,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11608,7 +11681,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11767,7 +11841,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11924,7 +11999,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12081,7 +12157,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12240,7 +12317,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12399,7 +12477,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12557,7 +12636,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12714,7 +12794,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12870,7 +12951,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13030,7 +13112,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13188,7 +13271,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13343,7 +13427,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13498,7 +13583,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13648,7 +13734,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13801,7 +13888,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13960,7 +14048,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14119,7 +14208,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14275,7 +14365,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14435,7 +14526,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14591,7 +14683,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14750,7 +14843,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14906,7 +15000,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15064,7 +15159,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15222,7 +15318,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15382,7 +15479,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15544,7 +15642,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15706,7 +15805,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15855,7 +15955,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16006,7 +16107,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16155,7 +16257,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16307,7 +16410,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16464,7 +16568,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16623,7 +16728,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16781,7 +16887,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16942,7 +17049,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17099,7 +17207,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17257,7 +17366,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17416,7 +17526,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17575,7 +17686,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17731,7 +17843,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17886,7 +17999,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18046,7 +18160,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18205,7 +18320,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18358,7 +18474,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18513,7 +18630,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18667,7 +18785,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18821,7 +18940,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18981,7 +19101,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19141,7 +19262,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19299,7 +19421,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19459,7 +19582,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19615,7 +19739,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19772,7 +19897,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19930,7 +20056,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20088,7 +20215,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20250,7 +20378,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20411,7 +20540,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20571,7 +20701,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20731,7 +20862,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20882,7 +21014,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21032,7 +21165,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21184,7 +21318,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21339,7 +21474,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21498,7 +21634,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21654,7 +21791,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21811,7 +21949,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21972,7 +22111,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22130,7 +22270,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22289,7 +22430,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22446,7 +22588,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22605,7 +22748,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22762,7 +22906,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22917,7 +23062,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23071,7 +23217,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23229,7 +23376,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23384,7 +23532,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23540,7 +23689,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23695,7 +23845,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23850,7 +24001,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24007,7 +24159,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24165,7 +24318,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24322,7 +24476,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24481,7 +24636,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24636,7 +24792,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24792,7 +24949,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24948,7 +25106,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -25104,7 +25263,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -25264,7 +25424,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -25420,7 +25581,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -25581,7 +25743,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -25740,7 +25903,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -25894,7 +26058,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26047,7 +26212,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26200,7 +26366,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26353,7 +26520,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26511,7 +26679,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26671,7 +26840,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26828,7 +26998,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -26987,7 +27158,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -27144,7 +27316,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -27299,7 +27472,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -27455,7 +27629,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -27615,7 +27790,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -27773,7 +27949,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -27932,7 +28109,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -28092,7 +28270,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -28250,7 +28429,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -28403,7 +28583,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -28557,7 +28738,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -28711,7 +28893,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -28865,7 +29048,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29022,7 +29206,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29184,7 +29369,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29343,7 +29529,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29500,7 +29687,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29659,7 +29847,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29817,7 +30006,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -29974,7 +30164,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -30133,7 +30324,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -30292,7 +30484,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -30450,7 +30643,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -30610,7 +30804,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -30769,7 +30964,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -30919,7 +31115,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -31073,7 +31270,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -31224,7 +31422,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -31378,7 +31577,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -31537,7 +31737,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -31695,7 +31896,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -31853,7 +32055,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32014,7 +32217,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32175,7 +32379,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32335,7 +32540,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32493,7 +32699,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32650,7 +32857,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32808,7 +33016,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -32966,7 +33175,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -33126,7 +33336,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -33284,7 +33495,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -33439,7 +33651,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -33593,7 +33806,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -33749,7 +33963,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -33903,7 +34118,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -34061,7 +34277,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -34218,7 +34435,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -34376,7 +34594,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -34533,7 +34752,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -34690,7 +34910,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -34845,7 +35066,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35004,7 +35226,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35163,7 +35386,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35321,7 +35545,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35479,7 +35704,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35639,7 +35865,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35799,7 +36026,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -35952,7 +36180,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -36104,7 +36333,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -36259,7 +36489,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -36411,7 +36642,8 @@ } ] }, - "target DNA description": "MYGENE" + "target DNA description": "MYGENE", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -43278,7 +43510,7 @@ "file name": "appbio_quantstudio_design_and_analysis_example15_v1.5.2.xlsx", "UNC path": "tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example15_v1.5.2.xlsx", "ASM converter name": "allotropy_appbio_quantstudio_design_&_analysis", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Design & Analysis Software", "software version": "1.x" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example16_v1.5.2.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example16_v1.5.2.json index a6dee0753a..dfb95b2b17 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example16_v1.5.2.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_design_and_analysis_example16_v1.5.2.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -137,7 +137,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -289,7 +290,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -440,7 +442,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -594,7 +597,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -744,7 +748,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -895,7 +900,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1048,7 +1054,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1204,7 +1211,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1353,7 +1361,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1503,7 +1512,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1653,7 +1663,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1803,7 +1814,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -1954,7 +1966,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2104,7 +2117,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2254,7 +2268,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2406,7 +2421,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2557,7 +2573,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2705,7 +2722,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -2854,7 +2872,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3003,7 +3022,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3153,7 +3173,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3303,7 +3324,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3452,7 +3474,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3604,7 +3627,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3756,7 +3780,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -3910,7 +3935,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4062,7 +4088,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4216,7 +4243,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4368,7 +4396,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4520,7 +4549,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4671,7 +4701,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4824,7 +4855,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -4975,7 +5007,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5126,7 +5159,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5278,7 +5312,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5427,7 +5462,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5582,7 +5618,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5737,7 +5774,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -5891,7 +5929,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6047,7 +6086,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6198,7 +6238,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6347,7 +6388,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6497,7 +6539,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6650,7 +6693,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6805,7 +6849,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -6958,7 +7003,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7110,7 +7156,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7261,7 +7308,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7410,7 +7458,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7559,7 +7608,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7710,7 +7760,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -7862,7 +7913,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8015,7 +8067,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8179,7 +8232,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8341,7 +8395,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8506,7 +8561,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8661,7 +8717,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8820,7 +8877,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -8974,7 +9032,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9127,7 +9186,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9278,7 +9338,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9428,7 +9489,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9577,7 +9639,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9733,7 +9796,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -9885,7 +9949,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10039,7 +10104,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10192,7 +10258,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10342,7 +10409,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10491,7 +10559,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10642,7 +10711,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10792,7 +10862,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -10943,7 +11014,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11097,7 +11169,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11253,7 +11326,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11404,7 +11478,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11557,7 +11632,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11710,7 +11786,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -11863,7 +11940,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12017,7 +12095,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12171,7 +12250,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12326,7 +12406,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12480,7 +12561,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12633,7 +12715,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12784,7 +12867,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -12939,7 +13023,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13089,7 +13174,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13239,7 +13325,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13390,7 +13477,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13545,7 +13633,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13698,7 +13787,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13849,7 +13939,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -13999,7 +14090,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14149,7 +14241,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14299,7 +14392,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14453,7 +14547,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14602,7 +14697,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14755,7 +14851,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -14905,7 +15002,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15059,7 +15157,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15208,7 +15307,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15360,7 +15460,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15510,7 +15611,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15662,7 +15764,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15812,7 +15915,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -15963,7 +16067,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16115,7 +16220,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16268,7 +16374,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16421,7 +16528,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16576,7 +16684,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16729,7 +16838,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -16880,7 +16990,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17035,7 +17146,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17190,7 +17302,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17342,7 +17455,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17497,7 +17611,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17647,7 +17762,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17796,7 +17912,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -17946,7 +18063,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18096,7 +18214,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18246,7 +18365,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18398,7 +18518,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18548,7 +18669,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18700,7 +18822,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -18851,7 +18974,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19002,7 +19126,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19155,7 +19280,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19304,7 +19430,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19456,7 +19583,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19608,7 +19736,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19758,7 +19887,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -19909,7 +20039,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20061,7 +20192,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20211,7 +20343,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20361,7 +20494,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20511,7 +20645,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20664,7 +20799,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20818,7 +20954,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -20971,7 +21108,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21126,7 +21264,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21282,7 +21421,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21437,7 +21577,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21590,7 +21731,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21743,7 +21885,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -21893,7 +22036,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22045,7 +22189,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22197,7 +22342,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22347,7 +22493,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22495,7 +22642,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22643,7 +22791,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22792,7 +22941,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -22944,7 +23094,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23094,7 +23245,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23247,7 +23399,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23396,7 +23549,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23549,7 +23703,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23700,7 +23855,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -23852,7 +24008,8 @@ } ] }, - "target DNA description": "18s" + "target DNA description": "18s", + "experimental data identifier": "experiment" } ], "experimental data identifier": "experiment", @@ -24002,7 +24159,8 @@ } ] }, - "target DNA 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"http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -194,7 +194,8 @@ [287985.6875, 285303.53125, 277517.4375, 270075.03125, 263106.375, 255122.375, 246444.984375, 238518.515625, 229575.203125, 220644.03125, 212855.359375, 206912.46875, 201908.4375, 197412.9375, 192818.359375, 188842.90625, 184884.15625, 181682.875, 179067.546875, 176428.71875, 174335.40625, 172552.796875, 170318.25, 167768.34375, 165306.859375, 162821.546875, 160880.359375, 158592.671875, 156355.1875, 154350.203125, 152407.78125, 151246.265625, 150037.421875, 148363.421875, 147012.640625, 146054.9375, 144414.21875, 143182.015625, 142921.453125, 142909.25] ] } - } + }, + "experimental data identifier": "my_experiment.eds" }, { "device control aggregate document": { @@ -385,7 +386,8 @@ [287985.6875, 285303.53125, 277517.4375, 270075.03125, 263106.375, 255122.375, 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a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS3_Relative_Quantification_example02.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS3_Relative_Quantification_example02.json index 59cb3f0348..414a007e6b 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS3_Relative_Quantification_example02.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS3_Relative_Quantification_example02.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -200,7 +200,8 @@ [138637.25, 138926.078125, 139934.34375, 140485.234375, 140598.3125, 140802.21875, 141288.046875, 141793.828125, 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139310.828125] ] } - } + }, + "experimental data identifier": "QS3_Relative_Quantification.eds" } ], "experimental data identifier": "QS3_Relative_Quantification.eds", @@ -29771,7 +29915,8 @@ [133485.046875, 133968.203125, 134769.1875, 135756.40625, 136596.828125, 137181.75, 137239.796875, 137683.765625, 138013.296875, 138449.75, 139148.28125, 139364.75, 139409.421875, 139459.609375, 139508.046875, 139815.515625, 139963.796875, 139917.0625, 140065.59375, 139886.421875, 139835.265625, 140105.828125, 140350.59375, 140361.71875, 140816.25, 140870.96875, 140687.796875, 140717.90625, 140738.140625, 141443.546875, 141566.015625, 141546.46875, 141823.109375, 142622.15625, 143253.578125, 143162.1875, 143213.90625, 143126.796875, 143724.375, 144323.765625] ] } - } + }, + "experimental data identifier": "QS3_Relative_Quantification.eds" }, { "device control aggregate document": { @@ -29963,7 +30108,8 @@ [133485.046875, 133968.203125, 134769.1875, 135756.40625, 136596.828125, 137181.75, 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155664.4375, 156274.28125, 156864.546875, 156913.140625, 157379.8125, 157246.421875] ] } - } + }, + "experimental data identifier": "QS3_Relative_Quantification.eds" }, { "device control aggregate document": { @@ -31989,7 +32144,8 @@ [146836.796875, 146886.546875, 147545.359375, 148137.421875, 148289.78125, 148894.109375, 149544.171875, 150162.53125, 150230.4375, 150490.953125, 150428.40625, 150409.28125, 150208.96875, 149902.703125, 149944.34375, 150826.046875, 150758.546875, 150520.21875, 150498.046875, 150766.125, 151112.953125, 151200.53125, 151233.21875, 151103.9375, 151151.359375, 151089.40625, 150956.953125, 150809.90625, 151140.765625, 152034.125, 152382.609375, 153086.34375, 153912.84375, 154814.46875, 155664.4375, 156274.28125, 156864.546875, 156913.140625, 157379.8125, 157246.421875] ] } - } + }, + "experimental data identifier": "QS3_Relative_Quantification.eds" } ], "experimental data identifier": "QS3_Relative_Quantification.eds", @@ -39765,7 +39921,7 @@ "file name": "appbio_quantstudio_designandanalysis_QS3_Relative_Quantification_example02.xlsx", "UNC path": "tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS3_Relative_Quantification_example02.xlsx", "ASM converter name": "allotropy_appbio_quantstudio_design_&_analysis", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Design & Analysis Software", "software version": "2.7.0" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS5_Standard_Curve_4Plex_example03.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS5_Standard_Curve_4Plex_example03.json index 23fc47c732..f89ab06ea5 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS5_Standard_Curve_4Plex_example03.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS5_Standard_Curve_4Plex_example03.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -191,7 +191,8 @@ [128106.3671875, 128532.796875, 129951.3984375, 130994.4921875, 131561.59375, 132330.640625, 134342.796875, 134648.640625, 134725.015625, 134732.9375, 134569.21875, 134675.34375, 134797.359375, 134821.53125, 135148.703125, 135261.125, 135265.734375, 135045.875, 134846.703125, 135082.03125, 135166.75, 135213.09375, 135267.5, 135282.28125, 135267.96875, 135095.625, 135014.921875, 135102.734375, 134975.984375, 134940.9375, 135042.796875, 135237.15625, 135330.21875, 135353.734375, 135276.125, 135289.203125, 135434.625, 136017.890625, 136171.1875, 136221.203125] ] } - } + }, + "experimental data 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converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Design & Analysis Software", "software version": "2.7.0" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS6Pro_Standard_Curve_example05.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS6Pro_Standard_Curve_example05.json index 3e25532837..852ccd09d3 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS6Pro_Standard_Curve_example05.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS6Pro_Standard_Curve_example05.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -191,7 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converter name": "allotropy_appbio_quantstudio_design_&_analysis", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Design & Analysis Software", "software version": "2.7.0" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Genotyping_example07.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Genotyping_example07.json index 4ff8021395..fd95291b67 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Genotyping_example07.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Genotyping_example07.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", 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016596b3f7..7778e41351 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Genotyping_missing_stage_number.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Genotyping_missing_stage_number.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -202,7 +202,8 @@ [123600.7421875, 130296.4453125, 130607.4296875, 130945.1640625, 131121.703125, 131047.703125, 131025.75, 131376.921875, 131566.421875, 131631.046875, 131737.625, 131891.1875, 131976.34375, 132078.828125, 131944.5, 131793.90625, 131873.890625, 132329.578125, 132515.1875, 132452.703125, 132638.984375, 132813.046875, 132696.484375, 132603.15625, 132616.375, 132743.0625, 132937.40625, 132891.921875, 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a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_PCR_with_Melt_example09.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_PCR_with_Melt_example09.json index dc926068f3..8d61b68ece 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_PCR_with_Melt_example09.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_PCR_with_Melt_example09.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -224,7 +224,8 @@ [19891.53125, 20338.29296875, 20900.390625, 21537.03515625, 22181.32421875, 22766.62890625, 23248.78515625, 23616.6953125, 23887.8203125, 24093.171875, 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101886.5234375, 101914.0625, 101823.5546875, 101872.2265625] ] } - } + }, + "experimental data identifier": "QS7Pro_Presence_and_Absence.eds" } ], "experimental data identifier": "QS7Pro_Presence_and_Absence.eds", @@ -33681,7 +33843,8 @@ [95595.3671875, 95693.1328125, 95817.1328125, 96149.0703125, 96689.5390625, 97109.34375, 97438.3515625, 97482.3046875, 97798.6640625, 97907.6953125, 97963.796875, 98041.25, 98005.2578125, 97894.328125, 97941.3046875, 97911.1875, 98006.0703125, 97985.0234375, 98211.1171875, 98094.1484375, 97919.2890625, 97840.6015625, 97795.390625, 98099.3046875, 98197.671875, 98334.3046875, 98346.9609375, 98805.9296875, 99149.7109375, 99281.4140625, 99371.9765625, 99607.953125, 99851.78125, 100270.8203125, 100433.359375, 100898.3359375, 101017.21875, 101169.5546875, 101151.1328125, 101211.109375] ] } - } + }, + "experimental data identifier": "QS7Pro_Presence_and_Absence.eds" }, { "device control aggregate document": { @@ -33876,7 +34039,8 @@ [95595.3671875, 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document": { @@ -34695,7 +34862,8 @@ [97620.703125, 97691.3125, 97775.9921875, 97753.5, 97747.7734375, 97802.46875, 98064.9609375, 98146.1953125, 98408.0546875, 98378.984375, 98338.2265625, 98516.1328125, 98471.4609375, 98386.5, 98361.2421875, 98338.765625, 98310.8828125, 98266.5703125, 98437.7109375, 98733.75, 98619.921875, 98394.78125, 98368.53125, 98687.234375, 98621.9453125, 98339.671875, 98392.84375, 99210.8671875, 99887.8359375, 100432.640625, 100748.546875, 101075.1875, 101141.5546875, 101525.8515625, 102310.375, 102607.6328125, 103146.2109375, 103317.9453125, 103624.65625, 103616.015625] ] } - } + }, + "experimental data identifier": "QS7Pro_Presence_and_Absence.eds" } ], "experimental data identifier": "QS7Pro_Presence_and_Absence.eds", @@ -38888,7 +39056,7 @@ "file name": "appbio_quantstudio_designandanalysis_QS7Pro_Presence_and_Absence_example10.xlsx", "UNC path": "tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Presence_and_Absence_example10.xlsx", "ASM converter name": "allotropy_appbio_quantstudio_design_&_analysis", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Design & Analysis Software", "software version": "2.7.0" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example18.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example18.json index 6f5b9f1130..65fc328cc9 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example18.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example18.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -61,7 +61,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -142,7 +143,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -223,7 +225,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": 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"Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -2973,7 +3009,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3050,7 +3087,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3127,7 +3165,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3204,7 +3243,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3281,7 +3321,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3358,7 +3399,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3435,7 +3477,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3512,7 +3555,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3589,7 +3633,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3666,7 +3711,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3743,7 +3789,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3820,7 +3867,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3901,7 +3949,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -3982,7 +4031,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4063,7 +4113,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4144,7 +4195,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4225,7 +4277,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4306,7 +4359,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4387,7 +4441,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4468,7 +4523,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4549,7 +4605,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4630,7 +4687,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4711,7 +4769,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4792,7 +4851,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4873,7 +4933,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -4954,7 +5015,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5035,7 +5097,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5116,7 +5179,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5197,7 +5261,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5278,7 +5343,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5359,7 +5425,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5440,7 +5507,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5521,7 +5589,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5602,7 +5671,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5683,7 +5753,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5764,7 +5835,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5845,7 +5917,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -5926,7 +5999,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6007,7 +6081,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6088,7 +6163,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6169,7 +6245,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6250,7 +6327,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6331,7 +6409,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6412,7 +6491,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6493,7 +6573,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6574,7 +6655,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6655,7 +6737,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6736,7 +6819,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6817,7 +6901,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6898,7 +6983,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -6979,7 +7065,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7060,7 +7147,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7141,7 +7229,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7222,7 +7311,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7303,7 +7393,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7384,7 +7475,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7465,7 +7557,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7546,7 +7639,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7627,7 +7721,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7708,7 +7803,8 @@ } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds" } ], "experimental data identifier": "Globin.03.PRIM.Requal.MX08.MLS.12Feb2024_CF.eds", @@ -7737,7 +7833,7 @@ "file name": "appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example18.xlsx", "UNC path": "tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example18.xlsx", "ASM converter name": "allotropy_appbio_quantstudio_design_&_analysis", - "ASM converter version": "0.1.105", + "ASM converter version": "0.1.118", "software name": "Design & Analysis Software", "software version": "2.6.0" }, diff --git a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example2.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example2.json index b46f5b4f69..ef5e89b57a 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example2.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Primary_Analysis_example2.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -200,7 +200,8 @@ [427562.0625, 427296.59375, 427130.125, 427092.90625, 426825.53125, 426840.21875, 427156.65625, 427107.3125, 427067.0, 427174.5625, 427114.03125, 427048.90625, 427030.96875, 427007.8125, 427110.6875, 427281.53125, 427186.03125, 427198.8125, 427493.53125, 427276.84375, 427147.15625, 427198.40625, 427462.125, 427320.6875, 427203.84375, 427140.125, 427168.5625, 427492.125, 427517.125, 427470.1875, 427620.1875, 427769.375, 427728.15625, 427714.96875, 427694.21875, 427871.34375, 427919.3125, 428083.5625, 428064.28125, 427998.90625, 428114.75, 428078.28125, 427945.0, 427788.34375, 427677.5625] ] } - } + }, + "experimental data identifier": "file name" }, { "device control aggregate document": { @@ -395,7 +396,8 @@ [427562.0625, 427296.59375, 427130.125, 427092.90625, 426825.53125, 426840.21875, 427156.65625, 427107.3125, 427067.0, 427174.5625, 427114.03125, 427048.90625, 427030.96875, 427007.8125, 427110.6875, 427281.53125, 427186.03125, 427198.8125, 427493.53125, 427276.84375, 427147.15625, 427198.40625, 427462.125, 427320.6875, 427203.84375, 427140.125, 427168.5625, 427492.125, 427517.125, 427470.1875, 427620.1875, 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a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_Biogroup_example12.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_Biogroup_example12.json index 773528891c..510d075471 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_Biogroup_example12.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_Biogroup_example12.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -198,7 +198,8 @@ [137176.890625, 137748.75, 138399.421875, 138593.890625, 138541.171875, 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b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_example11.json index b0e67480d7..b5f81fab9d 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_example11.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Relative_Quantification_example11.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -198,7 +198,8 @@ [195080.6875, 195295.578125, 197620.5625, 199450.03125, 200282.171875, 201472.703125, 201518.03125, 201488.328125, 201978.4375, 202047.578125, 202550.640625, 202326.21875, 201638.671875, 201326.15625, 201544.15625, 201921.25, 201874.484375, 201519.53125, 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33686f1b58..a0227dffb6 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Standard_Curve_example14.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_QS7Pro_Standard_Curve_example14.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -193,7 +193,8 @@ [125180.28125, 125377.7734375, 125840.6875, 126349.875, 127020.375, 127494.8046875, 128165.796875, 128234.5234375, 128387.5234375, 128465.015625, 129104.9921875, 129179.4609375, 129257.625, 129195.4453125, 129231.7734375, 129205.0, 129142.8203125, 129498.2421875, 129394.7109375, 129271.7109375, 129422.9296875, 129369.015625, 129623.9375, 129765.0234375, 129682.6015625, 129886.4296875, 129892.9140625, 130169.0078125, 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a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_no_RQ_values_example1.json b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_no_RQ_values_example1.json index 6262f824da..26eeb77102 100644 --- a/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_no_RQ_values_example1.json +++ b/tests/parsers/appbio_quantstudio_designandanalysis/testdata/appbio_quantstudio_designandanalysis_no_RQ_values_example1.json @@ -1,5 +1,5 @@ { - "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2024/09/qpcr.manifest", + "$asm.manifest": "http://purl.allotrope.org/manifests/pcr/REC/2026/03/qpcr.manifest", "qpcr aggregate document": { "qpcr document": [ { @@ -191,7 +191,8 @@ [128683.4609375, 128318.2265625, 126958.40625, 125548.21875, 123649.703125, 122833.5390625, 122347.4140625, 121794.171875, 121550.4375, 121515.328125, 121534.9921875, 121775.21875, 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Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -785,8 +797,7 @@ "sample role type": "unknown sample role", "well location identifier": "B01", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -812,11 +823,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -836,8 +849,7 @@ "sample role type": "unknown sample role", "well location identifier": "B01", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -863,11 +875,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -912,8 +926,7 @@ "sample role type": "unknown sample role", "well location identifier": "B02", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -939,11 +952,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -963,8 +978,7 @@ "sample role type": "unknown sample role", "well location identifier": "B02", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -990,11 +1004,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1039,8 +1055,7 @@ "sample role type": "unknown sample role", "well location identifier": "B03", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1066,11 +1081,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1090,8 +1107,7 @@ "sample role type": "unknown sample role", "well location identifier": "B03", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1117,11 +1133,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1166,8 +1184,7 @@ "sample role type": "unknown sample role", "well location identifier": "B04", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1193,11 +1210,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1217,8 +1236,7 @@ "sample role type": "unknown sample role", "well location identifier": "B04", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1244,11 +1262,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1293,8 +1313,7 @@ "sample role type": "unknown sample role", "well location identifier": "B05", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1320,11 +1339,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1344,8 +1365,7 @@ "sample role type": "unknown sample role", "well location identifier": "B05", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1371,11 +1391,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1420,8 +1442,7 @@ "sample role type": "unknown sample role", "well location identifier": "B06", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1447,11 +1468,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1471,8 +1494,7 @@ "sample role type": "unknown sample role", "well location identifier": "B06", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1498,11 +1520,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1547,8 +1571,7 @@ "sample role type": "unknown sample role", "well location identifier": "C01", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1574,11 +1597,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1598,8 +1623,7 @@ "sample role type": "unknown sample role", "well location identifier": "C01", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1625,11 +1649,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1674,8 +1700,7 @@ "sample role type": "unknown sample role", "well location identifier": "C02", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1701,11 +1726,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1725,8 +1752,7 @@ "sample role type": "unknown sample role", "well location identifier": "C02", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1752,11 +1778,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1801,8 +1829,7 @@ "sample role type": "unknown sample role", "well location identifier": "C03", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1828,11 +1855,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1852,8 +1881,7 @@ "sample role type": "unknown sample role", "well location identifier": "C03", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1879,11 +1907,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -1928,8 +1958,7 @@ "sample role type": "unknown sample role", "well location identifier": "C04", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -1955,11 +1984,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -1979,8 +2010,7 @@ "sample role type": "unknown sample role", "well location identifier": "C04", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2006,11 +2036,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2055,8 +2087,7 @@ "sample role type": "unknown sample role", "well location identifier": "C05", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2082,11 +2113,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2106,8 +2139,7 @@ "sample role type": "unknown sample role", "well location identifier": "C05", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2133,11 +2165,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2182,8 +2216,7 @@ "sample role type": "unknown sample role", "well location identifier": "C06", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2209,11 +2242,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2233,8 +2268,7 @@ "sample role type": "unknown sample role", "well location identifier": "C06", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref Low" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2260,11 +2294,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref Low" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2309,8 +2345,7 @@ "sample role type": "unknown sample role", "well location identifier": "D01", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2336,11 +2371,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2360,8 +2397,7 @@ "sample role type": "unknown sample role", "well location identifier": "D01", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2387,11 +2423,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2436,8 +2474,7 @@ "sample role type": "unknown sample role", "well location identifier": "D02", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2463,11 +2500,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2487,8 +2526,7 @@ "sample role type": "unknown sample role", "well location identifier": "D02", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS Baseline" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2514,11 +2552,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS Baseline" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2563,8 +2603,7 @@ "sample role type": "unknown sample role", "well location identifier": "D03", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2590,11 +2629,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2614,8 +2655,7 @@ "sample role type": "unknown sample role", "well location identifier": "D03", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2641,11 +2681,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2690,8 +2732,7 @@ "sample role type": "unknown sample role", "well location identifier": "D04", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2717,11 +2758,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2741,8 +2784,7 @@ "sample role type": "unknown sample role", "well location identifier": "D04", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "Ref High" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2768,11 +2810,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "Ref High" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2817,8 +2861,7 @@ "sample role type": "unknown sample role", "well location identifier": "D05", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS 3903" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2844,11 +2887,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS 3903" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2868,8 +2913,7 @@ "sample role type": "unknown sample role", "well location identifier": "D05", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS 3903" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2895,11 +2939,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS 3903" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -2944,8 +2990,7 @@ "sample role type": "unknown sample role", "well location identifier": "D06", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS 3903" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -2971,11 +3016,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS 3903" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" }, { "device control aggregate document": { @@ -2995,8 +3042,7 @@ "sample role type": "unknown sample role", "well location identifier": "D06", "custom information document": { - "SQ Std. Dev": 0.0, - "group identifier": "PBS 3903" + "SQ Std. Dev": 0.0 } }, "error aggregate document": { @@ -3022,11 +3068,13 @@ }, "custom information document": { "Cq Std. Dev": 0.0 - } + }, + "group identifier": "PBS 3903" } ] }, - "target DNA description": "N/A" + "target DNA description": "N/A", + "experimental data identifier": "N/A" } ], "experimental data identifier": "N/A", @@ -3057,7 +3105,7 @@ "file name": "example01.csv", "UNC path": "tests/parsers/cfxmaestro/testdata/example01.csv", "ASM converter name": "allotropy_bio_rad_cfx_maestro", - "ASM converter version": "0.1.113", + "ASM converter version": "0.1.118", "software name": "CFX Maestro" }, "device system document": {