feat: Migrate pcr (qPCR) parsers to REC 2026/03 schema

SUPPORTED_INSTRUMENT_SOFTWARE.adoc

@@ -64,7 +64,7 @@ The parsers follow maturation levels of: Recommended, Candidate Release, Working
 |Thermo Fisher Scientific VISIONlite|Recommended|BENCHLING/2023/12
 .2+|dPCR|AppBio AbsoluteQ|Recommended|BENCHLING/2023/09
 |Qiacuity dPCR|Recommended|BENCHLING/2023/09
-.3+|qPCR|AppBio QuantStudio RT-PCR|Recommended|REC/2024/09
-|AppBio QuantStudio Design & Analysis|Recommended|REC/2024/09
-|Bio-Rad CFX Maestro|Recommended|REC/2024/09
+.3+|qPCR|AppBio QuantStudio RT-PCR|Recommended|REC/2026/03
+|AppBio QuantStudio Design & Analysis|Recommended|REC/2026/03
+|Bio-Rad CFX Maestro|Recommended|REC/2026/03
 |===

src/allotropy/allotrope/models/adm/core/rec/_2026/_03/core.py

@@ -0,0 +1,270 @@
+# generated by allotropy.schema_gen
+# Re-exports imported types so downstream modules can import from here.
+# ruff: noqa: F401
+
+from __future__ import annotations
+
+from dataclasses import dataclass, field
+from typing import Any
+
+from allotropy.allotrope.models.shared.definitions.definitions import (
+    TClass,
+    TQuantityValue,
+    TStatisticDatumRole,
+    TUnit,
+)
+
+
+@dataclass(frozen=True, kw_only=True)
+class Asm:
+    pass
+
+
+@dataclass(frozen=True, kw_only=True)
+class MixedItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+
+
+@dataclass(frozen=True, kw_only=True)
+class OrderedItem:
+    field_index: int | None = field(default=None, metadata={"json_name": "@index"})
+
+
+TArray = list[Any]
+
+
+@dataclass(frozen=True, kw_only=True)
+class TBooleanValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: bool
+
+
+@dataclass(frozen=True, kw_only=True)
+class TByteValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDateTimeStampValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDateTimeValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDateValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDecimalValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: float
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDoubleValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: float
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDurationValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TFloatValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: float
+
+
+@dataclass(frozen=True, kw_only=True)
+class TIRIValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TIntValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TIntegerValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TLongValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+TNamed = str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TObject:
+    pass
+
+
+TReference = str
+
+
+TResource = str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TShortValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TStringValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TTimeValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: str
+
+
+@dataclass(frozen=True, kw_only=True)
+class TUnsignedByteValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TUnsignedIntValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TUnsignedLongValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+@dataclass(frozen=True, kw_only=True)
+class TUnsignedShortValueItem:
+    field_type: TClass = field(metadata={"json_name": "@type"})
+    value: int
+
+
+TBooleanValue = TBooleanValueItem | bool
+
+
+TByteValue = TByteValueItem | int
+
+
+TDateTimeStampValue = TDateTimeStampValueItem | str
+
+
+TDateTimeValue = TDateTimeValueItem | str
+
+
+TDateValue = TDateValueItem | str
+
+
+TDecimalValue = TDecimalValueItem | float
+
+
+TDoubleValue = TDoubleValueItem | float
+
+
+TDurationValue = TDurationValueItem | str
+
+
+TFloatValue = TFloatValueItem | float
+
+
+TIRIValue = TIRIValueItem | str
+
+
+TIntValue = TIntValueItem | int
+
+
+TIntegerValue = TIntegerValueItem | int
+
+
+TLongValue = TLongValueItem | int
+
+
+TShortValue = TShortValueItem | int
+
+
+TStringValue = TStringValueItem | str
+
+
+TTimeValue = TTimeValueItem | str
+
+
+TUnsignedByteValue = TUnsignedByteValueItem | int
+
+
+TUnsignedIntValue = TUnsignedIntValueItem | int
+
+
+TUnsignedLongValue = TUnsignedLongValueItem | int
+
+
+TUnsignedShortValue = TUnsignedShortValueItem | int
+
+
+TNumericValue = (
+    TByteValue
+    | TDecimalValue
+    | TDoubleValue
+    | TFloatValue
+    | TIntValue
+    | TIntegerValue
+    | TLongValue
+    | TShortValue
+    | TUnsignedByteValue
+    | TUnsignedIntValue
+    | TUnsignedLongValue
+    | TUnsignedShortValue
+)
+
+
+TOrderedValue = (
+    TDateTimeStampValue
+    | TDateTimeValue
+    | TDateValue
+    | TNumericValue
+    | TStringValue
+    | TTimeValue
+)
+
+
+@dataclass(frozen=True, kw_only=True)
+class TRangeValue:
+    max_exclusive: TOrderedValue | None = field(
+        default=None, metadata={"json_name": "maxExclusive"}
+    )
+    max_inclusive: TOrderedValue | None = field(
+        default=None, metadata={"json_name": "maxInclusive"}
+    )
+    min_exclusive: TOrderedValue | None = field(
+        default=None, metadata={"json_name": "minExclusive"}
+    )
+    min_inclusive: TOrderedValue | None = field(
+        default=None, metadata={"json_name": "minInclusive"}
+    )
+    unit: TUnit | None = None

src/allotropy/allotrope/models/adm/core/rec/_2026/_03/cube.py

@@ -0,0 +1,114 @@
+# generated by allotropy.schema_gen
+
+from __future__ import annotations
+
+from dataclasses import dataclass, field
+from enum import Enum
+
+from allotropy.allotrope.models.adm.core.rec._2026._03.core import (
+    TClass,
+    TUnit,
+)
+
+
+class ComponentDatatype(Enum):
+    double = "double"
+    float = "float"
+    decimal = "decimal"
+    integer = "integer"
+    byte = "byte"
+    int = "int"
+    short = "short"
+    long = "long"
+    string = "string"
+    boolean = "boolean"
+    date_time = "dateTime"
+
+
+class Scale(Enum):
+    nominal = "nominal"
+    ordinal = "ordinal"
+    cardinal = "cardinal"
+    interval = "interval"
+    range = "range"
+
+
+TBooleanArray = list[bool]
+
+
+TBooleanOrNullArray = list[None | bool]
+
+
+TNumberArray = list[float]
+
+
+TNumberOrNullArray = list[None | float]
+
+
+TStringArray = list[str]
+
+
+TStringOrNullArray = list[None | str]
+
+
+TTupleData = list[None | bool | float | str]
+
+
+class Type(Enum):
+    linear = "linear"
+    logarithmic = "logarithmic"
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDatacubeComponent:
+    field_component_datatype: ComponentDatatype = field(
+        metadata={"json_name": "@componentDatatype"}
+    )
+    concept: TClass
+    scale: Scale | None = None
+    unit: TUnit | None = None
+
+
+TDimensionArray = TBooleanArray | TNumberArray | TStringArray
+
+
+TMeasureArray = TBooleanOrNullArray | TNumberOrNullArray | TStringOrNullArray
+
+
+@dataclass(frozen=True, kw_only=True)
+class TFunction:
+    incr: float | None = None
+    length: float | None = None
+    start: float | None = None
+    type: Type | None = None
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDatacubeStructure:
+    dimensions: list[TDatacubeComponent]
+    measures: list[TDatacubeComponent]
+
+
+@dataclass(frozen=True, kw_only=True)
+class TMeasureData:
+    measures: list[TMeasureArray] | None = None
+    points: list[TTupleData] | None = None
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDimensionData:
+    dimensions: list[TDimensionArray | TFunction]
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDatacubeData(TDimensionData, TMeasureData):
+    pass
+
+
+@dataclass(frozen=True, kw_only=True)
+class TDatacube:
+    cube_structure: TDatacubeStructure | None = field(
+        default=None, metadata={"json_name": "cube-structure"}
+    )
+    data: TDatacubeData | None = None
+    label: str | None = None