Merge branch 'master' of https://github.com/BioContainers/multi-package-containers into changeo-igblast

Author: ggabernet

combinations/hash.tsv

@@ -532,7 +532,7 @@ gatk4=4.4.0.0,samtools=1.18,coreutils=9.3
 mtm-align=20220104,pigz=2.8
 gatk4=4.4.0.0,samtools=1.18,coreutils=9.3
 r-base,r-dplyr,r-optparse,r-devtools,r-topicmodels,r-philentropy,r-metrics,r-jsonlite
-presto=0.7.1,igblast=1.22.0,wget=1.20.1,biopython=1.79	quay.io/bioconda/base-glibc-busybox-bash:2.1.0	0
+presto=0.7.4,igblast=1.22.0,wget=1.20.1,biopython=1.85	quay.io/bioconda/base-glibc-busybox-bash:2.1.0	0
 bioconductor-limma=3.58.1,bioconductor-edger=4.0.2,r-data.table=1.14.10,r-gplots=3.1.3,r-statmod=1.5.0
 r-nacho=2.0.6,r-dplyr=1.1.4,r-ggplot2=3.4.4,r-fs=1.6.2,r-readr=2.1.5,r-tidyr=1.3.0
 r-yaml=2.3.7,r-ggplot2=3.4.4,r-dplyr=1.1.4,r-stringr=1.5.0,bioconductor-gsva=1.46.0,bioconductor-singscore=1.18.0,r-factominer=2.8.0,r-readr=2.1.5,r-tibble=3.2.1,r-matrixstats=1.1.0
@@ -638,3 +638,7 @@ python=3.10,ucsc-gtftogenepred=469,ucsc-genepredtobed=469
 bioconductor-flames=1.8.0,minimap2=2.28
 bowtie2=2.5.4,samtools=1.21
 python=3.13.2,samtools=1.21
+r-poolfstat=3.0.0,r-optparse=1.7.5,r-tibble=3.2.1,r-stringr=1.5.1,r-readr=2.1.5,r-dplyr=1.1.4
+r-dplyr=1.1.4,r-tidyr=1.3.1,r-readr=2.1.5,r-janitor=2.2.1,r-purrr=1.0.4,r-optparse=1.7.5,r-matrixstats=1.5.0
+amulety=1.0,igblast=1.22.0
+bioconductor-sparsesignatures=2.16.0,bioconductor-bsgenome.hsapiens.1000genomes.hs37d5=0.99.1,bioconductor-bsgenome.hsapiens.ucsc.hg38=1.4.5,r-dplyr=1.1.4,r-tidyr=1.3.1,r-patchwork=1.3.0

combinations/mmseqs2:17-b804f-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+mmseqs2=17-b804f	quay.io/bioconda/base-glibc-busybox-bash:latest	0

combinations/mulled-v2-332a99288bd5d8f1de5b31239a1f78c10719055c:c0ba8ec647a34d671566564643ea55f193dd1628-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+last=1519,mmseqs2=16.747c6,ucsc-blat=445,proteinortho=6.3.5,diamond=2.1.8,blast=2.15.0	quay.io/bioconda/base-glibc-debian-bash:latest	0

combinations/mulled-v2-4b113da51cc8adbc9a79baf6c7c613ff34cde372:6a4ab77d91b765aabec93d72a2c9858491aaad58-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+tifffile=2024.7.24,giatools=0.4.0,numpy=2.2.3	quay.io/bioconda/base-glibc-busybox-bash:latest	0

combinations/mulled-v2-4eea244974a53a81efc346a4fa9bdfd103e1c9df:e8360df15ed14ce0294477d85f8763fa15108270-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+fonts-conda-ecosystem=1,tar=1.34,busco=5.8.0,sepp=4.5.5,augustus=3.5.0	quay.io/bioconda/base-glibc-debian-bash:latest	0

combinations/mulled-v2-7feffe07e7974577fd2f0e0bb9db85a0475d6c63:908ca4f4450f8e9062958587a17690e415721ef1-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+crbeam=1.1.1,gammapy=1.3,minio=7.2.15,scipy=1.11.4,specutils=1.19.0,astroquery=0.4.10,oda-api=1.2.37,unzip=6.0,astropy=5.3,ipython=9.1.0,seaborn=0.13.2,pyarrow=19.0.1,matplotlib=3.9.4	quay.io/bioconda/base-glibc-busybox-bash:latest	0

combinations/mulled-v2-d0a31f0595153d696783e255901e79d6f9e26a7b:de2082c5ae83f54b66cab8c76132fe73f5e29e43-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+panaroo=1.5.2,prank=170427,clustalo=1.2.4	quay.io/bioconda/base-glibc-busybox-bash:latest	0

combinations/mulled-v2-f0af8a998a94e44a86851e851c6665bd130136ff:a83f5f02850ab93c4ec56cb59b437bcb20fb9b72-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+drep=3.6.1,checkm-genome=1.2.3	quay.io/bioconda/base-glibc-busybox-bash:latest	0

combinations/rrparser:2.7.0-0.tsv

@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+rrparser=2.7.0	quay.io/bioconda/base-glibc-busybox-bash:latest	0