Merge branch 'master' into mulled-v2-8311fc606069e8940fa5f252c3c6c0f0d3e85e45-8f87835ddcb1a70a951346f49d892214113938e2

bgruening · web-flow · commit bfcdf35f334f · 2026-03-24T14:19:42.000+01:00
diff --git a/.github/workflows/auto-merge-bot.yaml b/.github/workflows/auto-merge-bot.yaml
@@ -16,6 +16,6 @@ jobs:
           private-key: ${{ secrets.APP_PRIVATE_KEY }}
 
       - name: Enable Pull Request Automerge
-        run: gh pr merge --merge --auto "${{ github.event.pull_request.number }}"
+        run: gh pr merge --merge --auto --repo "${{ github.repository }}" "${{ github.event.pull_request.number }}"
         env:
           GH_TOKEN: ${{ steps.app-token.outputs.token }}
diff --git a/combinations/mulled-v2-06ec6bf2dcf58031a4c18aac86aa7a56d20c446e:017865b562f5517fdeb3645afaa441900608a9c2-0.tsv b/combinations/mulled-v2-06ec6bf2dcf58031a4c18aac86aa7a56d20c446e:017865b562f5517fdeb3645afaa441900608a9c2-0.tsv
@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+bcftools=1.22,vcftools=0.1.17	quay.io/bioconda/base-glibc-busybox-bash:latest	0
diff --git a/combinations/mulled-v2-66534bcbb7031a148b13e2ad42583020b9cd25c4:eb7d926a9d7da1ab8e5427cd947dbbb8795eabab-0.tsv b/combinations/mulled-v2-66534bcbb7031a148b13e2ad42583020b9cd25c4:eb7d926a9d7da1ab8e5427cd947dbbb8795eabab-0.tsv
@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+samtools=1.22.1,minimap2=2.30	quay.io/bioconda/base-glibc-busybox-bash:latest	0
diff --git a/combinations/mulled-v2-c25ed1029ee695ccabc980a2341b010700699318:715fe9609db6466e13a8482be3c72ed5b6103c74-0.tsv b/combinations/mulled-v2-c25ed1029ee695ccabc980a2341b010700699318:715fe9609db6466e13a8482be3c72ed5b6103c74-0.tsv
@@ -0,0 +1,2 @@
+#targets	base_image	image_build
+datamash=1.9,coreutils=9.5	quay.io/bioconda/base-glibc-busybox-bash:latest	0

Original file line number	Diff line number	Diff line change
`@@ -0,0 +1,2 @@`
	`1`	`+#targets base_image image_build`
	`2`	`+bcftools=1.22,vcftools=0.1.17 quay.io/bioconda/base-glibc-busybox-bash:latest 0`
Original file line number	Diff line number	Diff line change
`@@ -0,0 +1,2 @@`
	`1`	`+#targets base_image image_build`
	`2`	`+samtools=1.22.1,minimap2=2.30 quay.io/bioconda/base-glibc-busybox-bash:latest 0`
Original file line number	Diff line number	Diff line change
`@@ -0,0 +1,2 @@`
	`1`	`+#targets base_image image_build`
	`2`	`+datamash=1.9,coreutils=9.5 quay.io/bioconda/base-glibc-busybox-bash:latest 0`