From a2393b8520f0e469faf17dc2eea632cd7ffe1756 Mon Sep 17 00:00:00 2001 From: mykle hoban Date: Fri, 4 Apr 2025 15:25:55 -1000 Subject: [PATCH 1/2] add containers with f-stats and tidy r tools --- combinations/hash.tsv | 2 ++ 1 file changed, 2 insertions(+) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index 5b9e9a453..cd86b1d66 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -638,3 +638,5 @@ python=3.10,ucsc-gtftogenepred=469,ucsc-genepredtobed=469 bioconductor-flames=1.8.0,minimap2=2.28 bowtie2=2.5.4,samtools=1.21 python=3.13.2,samtools=1.21 +conda-forge::r-poolfstat=3.0.0,r-optparse=1.7.5,r-tibble=3.2.1,r-stringr=1.5.1,r-readr=2.1.5,r-dplyr=1.1.4 +r-dplyr=1.1.4,r-tidyr=1.3.1,r-readr=2.1.5,r-janitor=2.2.1,r-purrr=1.0.4,r-optparse=1.7.5,r-matrixstats=1.5.0 From 750e97bdcf5215a511498bab893917008cedc5be Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Sat, 5 Apr 2025 09:32:56 +0200 Subject: [PATCH 2/2] Update combinations/hash.tsv --- combinations/hash.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index cd86b1d66..865635008 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -638,5 +638,5 @@ python=3.10,ucsc-gtftogenepred=469,ucsc-genepredtobed=469 bioconductor-flames=1.8.0,minimap2=2.28 bowtie2=2.5.4,samtools=1.21 python=3.13.2,samtools=1.21 -conda-forge::r-poolfstat=3.0.0,r-optparse=1.7.5,r-tibble=3.2.1,r-stringr=1.5.1,r-readr=2.1.5,r-dplyr=1.1.4 +r-poolfstat=3.0.0,r-optparse=1.7.5,r-tibble=3.2.1,r-stringr=1.5.1,r-readr=2.1.5,r-dplyr=1.1.4 r-dplyr=1.1.4,r-tidyr=1.3.1,r-readr=2.1.5,r-janitor=2.2.1,r-purrr=1.0.4,r-optparse=1.7.5,r-matrixstats=1.5.0