From b622a036448826fa75a542a33cdfd4c881def53e Mon Sep 17 00:00:00 2001 From: Zachary Foster Date: Mon, 28 Apr 2025 15:18:18 -0700 Subject: [PATCH 1/2] add ncbi-datasets-cli + samtools + unzip --- combinations/hash.tsv | 1 + 1 file changed, 1 insertion(+) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index 57419d5d7..6ce856653 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -643,3 +643,4 @@ r-dplyr=1.1.4,r-tidyr=1.3.1,r-readr=2.1.5,r-janitor=2.2.1,r-purrr=1.0.4,r-optpar amulety=1.1,igblast=1.22.0 bioconductor-sparsesignatures=2.16.0,bioconductor-bsgenome.hsapiens.1000genomes.hs37d5=0.99.1,bioconductor-bsgenome.hsapiens.ucsc.hg38=1.4.5,r-dplyr=1.1.4,r-tidyr=1.3.1,r-patchwork=1.3.0 khmer=3.0.0a3,sourmash=4.8.3 +conda-forge::ncbi-datasets-cli=15.11.0,samtools=1.18,conda-forge::unzip=6.0 From 11fcdfdf0b5f76c9480de4a3f2f8072a9f6dc226 Mon Sep 17 00:00:00 2001 From: Zachary Foster Date: Tue, 29 Apr 2025 08:48:30 -0700 Subject: [PATCH 2/2] Update combinations/hash.tsv MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Björn Grüning --- combinations/hash.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/combinations/hash.tsv b/combinations/hash.tsv index 6ce856653..7c5609094 100644 --- a/combinations/hash.tsv +++ b/combinations/hash.tsv @@ -643,4 +643,4 @@ r-dplyr=1.1.4,r-tidyr=1.3.1,r-readr=2.1.5,r-janitor=2.2.1,r-purrr=1.0.4,r-optpar amulety=1.1,igblast=1.22.0 bioconductor-sparsesignatures=2.16.0,bioconductor-bsgenome.hsapiens.1000genomes.hs37d5=0.99.1,bioconductor-bsgenome.hsapiens.ucsc.hg38=1.4.5,r-dplyr=1.1.4,r-tidyr=1.3.1,r-patchwork=1.3.0 khmer=3.0.0a3,sourmash=4.8.3 -conda-forge::ncbi-datasets-cli=15.11.0,samtools=1.18,conda-forge::unzip=6.0 +ncbi-datasets-cli=15.11.0,samtools=1.18,unzip=6.0