Gleason_grading/environment.yml at main · Biomedical-Data-Design/Gleason_grading · GitHub

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name: openslide
channels:
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1=main
  - _openmp_mutex=5.1=1_gnu
  - blas=1.0=openblas
  - bzip2=1.0.8=h7b6447c_0
  - ca-certificates=2023.01.10=h06a4308_0
  - cairo=1.16.0=hb05425b_3
  - fftw=3.3.9=h27cfd23_1
  - fontconfig=2.14.1=hef1e5e3_0
  - freetype=2.10.4=h0708190_1
  - gdk-pixbuf=2.42.8=h433bba3_1
  - giflib=5.2.1=h36c2ea0_2
  - glib=2.69.1=he621ea3_2
  - icu=58.2=hf484d3e_1000
  - imageio=2.26.0=pyh24c5eb1_0
  - jpeg=9e=h166bdaf_1
  - lcms2=2.12=h3be6417_0
  - ld_impl_linux-64=2.38=h1181459_1
  - lerc=3.0=h295c915_0
  - libblas=3.9.0=15_linux64_openblas
  - libcblas=3.9.0=15_linux64_openblas
  - libdeflate=1.8=h7f8727e_5
  - libffi=3.4.2=h6a678d5_6
  - libgcc-ng=11.2.0=h1234567_1
  - libgfortran-ng=12.2.0=h69a702a_19
  - libgfortran5=12.2.0=h337968e_19
  - libgomp=11.2.0=h1234567_1
  - liblapack=3.9.0=15_linux64_openblas
  - libopenblas=0.3.20=pthreads_h78a6416_0
  - libpng=1.6.37=hbc83047_0
  - libstdcxx-ng=11.2.0=h1234567_1
  - libtiff=4.4.0=hecacb30_2
  - libuuid=1.41.5=h5eee18b_0
  - libwebp=1.2.4=h11a3e52_1
  - libwebp-base=1.2.4=h5eee18b_1
  - libxcb=1.15=h7f8727e_0
  - libxml2=2.9.14=h74e7548_0
  - lz4-c=1.9.3=h9c3ff4c_1
  - ncurses=6.4=h6a678d5_0
  - openjpeg=2.3.1=hf7af979_3
  - openslide=3.4.1=h8137273_1
  - openssl=1.1.1t=h7f8727e_0
  - pcre=8.45=h9c3ff4c_0
  - pixman=0.40.0=h36c2ea0_0
  - python=3.10.9=h7a1cb2a_0
  - python_abi=3.10=2_cp310
  - readline=8.2=h5eee18b_0
  - sqlite=3.40.1=h5082296_0
  - threadpoolctl=2.2.0=pyh0d69192_0
  - tk=8.6.12=h1ccaba5_0
  - tzdata=2022g=h04d1e81_0
  - xz=5.2.10=h5eee18b_1
  - zlib=1.2.13=h5eee18b_0
  - zstd=1.5.2=ha4553b6_0
  - pip:
    - appdirs==1.4.4
    - certifi==2022.12.7
    - charset-normalizer==3.0.1
    - click==8.1.3
    - collection==0.1.6
    - contourpy==1.0.7
    - cycler==0.11.0
    - docker-pycreds==0.4.0
    - fonttools==4.38.0
    - gitdb==4.0.10
    - gitpython==3.1.31
    - idna==3.4
    - joblib==1.1.1
    - kiwisolver==1.4.4
    - matplotlib==3.7.0
    - numpy==1.22.3
    - nvidia-cublas-cu11==11.10.3.66
    - nvidia-cuda-nvrtc-cu11==11.7.99
    - nvidia-cuda-runtime-cu11==11.7.99
    - nvidia-cudnn-cu11==8.5.0.96
    - opencv-python==4.7.0.72
    - openslide-python==1.2.0
    - packaging==23.0
    - pandas==1.5.3
    - patchify==0.2.3
    - pathtools==0.1.2
    - pillow==9.4.0
    - pip==22.3.1
    - protobuf==4.22.0
    - psutil==5.9.4
    - pyparsing==3.0.9
    - python-dateutil==2.8.2
    - pytz==2022.7.1
    - pyyaml==6.0
    - requests==2.28.2
    - scikit-learn==1.2.2
    - scipy==1.7.3
    - sentry-sdk==1.16.0
    - setproctitle==1.3.2
    - setuptools==65.6.3
    - six==1.16.0
    - smmap==5.0.0
    - torch==1.13.1
    - torchmetrics==0.11.1
    - torchvision==0.14.1
    - typing-extensions==4.5.0
    - urllib3==1.26.14
    - wandb==0.13.10
    - wheel==0.38.4
prefix: /home/yzhao155/.conda/envs/openslide