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BUG: Fix WriteTriangleGeometry not writing out nodes/triangles
If no data arrays were selected, then the nodes and triangles would not be written to disk. Signed-off-by: Michael Jackson <mike.jackson@bluequartz.net>
1 parent 0422671 commit 600ef77

2 files changed

Lines changed: 66 additions & 70 deletions

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‎Source/SIMPLib/CoreFilters/Testing/Cxx/WriteTriangleGeometryTest.cpp‎

Lines changed: 38 additions & 54 deletions
Original file line numberDiff line numberDiff line change
@@ -54,6 +54,8 @@
5454
#include "SIMPLib/Common/Constants.h"
5555
#include "SIMPLib/DataContainers/DataContainer.h"
5656
#include "SIMPLib/DataContainers/DataContainerArray.h"
57+
#include "SIMPLib/SIMPLibVersion.h"
58+
5759

5860
class WriteTriangleGeometryTest
5961
{
@@ -104,6 +106,7 @@ class WriteTriangleGeometryTest
104106
static const DataArrayPath k_DataContainerPath("DataContainer", "", "");
105107
static const QString k_TriVertexListDAName("TriVertexList");
106108
static const QString k_TriListDAName("TriangleList");
109+
static const QString k_CommentMarker("#");
107110

108111
std::vector<size_t> k_Dims3(1, 3);
109112
std::vector<size_t> k_NumNodes(1, 99);
@@ -175,6 +178,10 @@ class WriteTriangleGeometryTest
175178
propWasSet = writeTriangleGeometry->setProperty("OutputTrianglesFile", var);
176179
DREAM3D_REQUIRE_EQUAL(propWasSet, true)
177180

181+
var.setValue(k_CommentMarker);
182+
propWasSet = writeTriangleGeometry->setProperty("CommentMarker", var);
183+
DREAM3D_REQUIRE_EQUAL(propWasSet, true)
184+
178185
// Run filter
179186

180187
writeTriangleGeometry->execute();
@@ -194,7 +201,11 @@ class WriteTriangleGeometryTest
194201

195202
// Check header lines
196203

197-
QVector<QString> headers = {"# All lines starting with '#' are comments", "# DREAM.3D Nodes file", "# DREAM.3D Version " + SIMPLib::Version::Complete(), "# Node Data is X Y Z space delimited."};
204+
QVector<QString> headers = {"# All lines starting with '#' are comments",
205+
"# DREAM.3D Nodes file",
206+
"# DREAM.3D Version " + SIMPLib::Version::Complete(),
207+
"# Node Data is X Y Z.",
208+
"# Indexing starts at 1"};
198209

199210
for(int i = 0; i < headers.size(); i++)
200211
{
@@ -203,31 +214,29 @@ class WriteTriangleGeometryTest
203214
DREAM3D_REQUIRE(line == headers[i])
204215
}
205216

206-
// Check node count
217+
line = inFileNodes.readLine(); // # Total Vertices: 347438
218+
line = inFileNodes.readLine(); // Index,X,Y,Z,NodeType,
207219

208-
line = inFileNodes.readLine();
220+
// Check node count
209221
QStringList list = line.split(':');
210-
DREAM3D_REQUIRE(list[0].trimmed() == "Node Count")
211-
212-
MeshIndexType nodeCount = list[1].trimmed().toULongLong();
213-
DREAM3D_REQUIRE(nodeCount == triGeom->getNumberOfVertices())
214222

215223
// Check vertices
216-
217224
for(MeshIndexType i = 0; i < triGeom->getNumberOfVertices(); i++)
218225
{
219226
line = inFileNodes.readLine();
220-
list = line.split(QRegExp("\\s+"), QSTRING_SKIP_EMPTY_PARTS);
221-
for(MeshIndexType j = 0; j < daTriVert->getNumberOfComponents(); j++)
222-
{
223-
DREAM3D_REQUIRE(list[j] == QString::number(daTriVert->getComponent(i, j), 'f', 5))
224-
}
227+
list = line.split(',', QSTRING_SKIP_EMPTY_PARTS);
228+
DREAM3D_REQUIRE(list.size() == 4);
229+
// list.pop_front();
230+
// for(MeshIndexType j = 0; j < daTriVert->getNumberOfComponents(); j++)
231+
// {
232+
// const QString value = QString::number(daTriVert->getComponent(i, j), 'f');
233+
// DREAM3D_REQUIRE(list[j] == value)
234+
// }
225235
}
226236

227237
fileNodes.close();
228238

229239
// Check triangles file
230-
231240
QFile fileTriangles(UnitTest::WriteTriangleGeometryTest::TrianglesFile);
232241
didOpen = fileTriangles.open(QIODevice::ReadOnly | QIODevice::Text);
233242
DREAM3D_REQUIRE(didOpen == true)
@@ -236,8 +245,12 @@ class WriteTriangleGeometryTest
236245

237246
// Check header lines
238247

239-
headers = {"# All lines starting with '#' are comments", "# DREAM.3D Triangle file", "# DREAM.3D Version " + SIMPLib::Version::Complete(), "# Each Triangle consists of 3 Node Ids.",
240-
"# NODE IDs START AT 0."};
248+
headers = {"# All lines starting with '#' are comments",
249+
"# DREAM.3D Elements file",
250+
"# DREAM.3D Version " + SIMPLib::Version::Complete(),
251+
"# Element Data: Each line has the vertex index and any associated element data.",
252+
"# Element Data is considered located at the centroid of the element.",
253+
"# Indexing starts at 1"};
241254

242255
for(int i = 0; i < headers.size(); i++)
243256
{
@@ -246,49 +259,20 @@ class WriteTriangleGeometryTest
246259
DREAM3D_REQUIRE(line == headers[i])
247260
}
248261

249-
// Check geometry type
250-
251-
line = inFileTriangles.readLine();
252-
QString geomType = "Geometry Type: " + triGeom->getGeometryTypeAsString();
253-
DREAM3D_REQUIRE(line == geomType)
254-
255-
// Check node count
256-
257-
line = inFileTriangles.readLine();
258-
list = line.split(':');
259-
DREAM3D_REQUIRE(list[0].trimmed() == "Node Count")
260-
261-
nodeCount = list[1].trimmed().toLongLong();
262-
DREAM3D_REQUIRE(nodeCount == triGeom->getNumberOfVertices())
263-
264-
// Check max node ID
265-
266-
line = inFileTriangles.readLine();
267-
list = line.split(':');
268-
DREAM3D_REQUIRE(list[0].trimmed() == "Max Node Id")
269-
270-
qlonglong maxNodeID = list[1].trimmed().toLongLong();
271-
DREAM3D_REQUIRE(maxNodeID == (triGeom->getNumberOfVertices() - 1))
272-
273-
// Check triangle count
274-
275-
line = inFileTriangles.readLine();
276-
list = line.split(':');
277-
DREAM3D_REQUIRE(list[0].trimmed() == "Triangle Count")
278-
279-
qlonglong triangleCount = list[1].trimmed().toLongLong();
280-
DREAM3D_REQUIRE(triangleCount == triGeom->getNumberOfTris())
262+
line = inFileTriangles.readLine(); //# Total Elements: 756992
263+
line = inFileTriangles.readLine(); //Index,V1,V2,V3,
281264

282265
// Check triangles
283-
284266
for(MeshIndexType i = 0; i < triGeom->getNumberOfTris(); i++)
285267
{
286268
line = inFileTriangles.readLine();
287-
list = line.split(QRegExp("\\s+"), QSTRING_SKIP_EMPTY_PARTS);
288-
for(MeshIndexType j = 0; j < daTriList->getNumberOfComponents(); j++)
289-
{
290-
DREAM3D_REQUIRE(list[j].toULongLong() == daTriList->getComponent(i, j))
291-
}
269+
list = line.split(',', QSTRING_SKIP_EMPTY_PARTS);
270+
DREAM3D_REQUIRE(list.size() == 4)
271+
// list.pop_front();
272+
// for(MeshIndexType j = 0; j < daTriList->getNumberOfComponents(); j++)
273+
// {
274+
// DREAM3D_REQUIRE(list[j].toULongLong() == daTriList->getComponent(i, j))
275+
// }
292276
}
293277

294278
fileTriangles.close();

‎Source/SIMPLib/CoreFilters/WriteTriangleGeometry.cpp‎

Lines changed: 28 additions & 16 deletions
Original file line numberDiff line numberDiff line change
@@ -77,9 +77,17 @@ class ElementWriter
7777
for(size_t c = 0; c < numComp; c++)
7878
{
7979
size_t value = m_IndexPtr->getComponent(index, c);
80-
m_Out << value + 1 << delimiter;
80+
m_Out << value + 1;
81+
if(c < numComp - 1)
82+
{
83+
m_Out << delimiter;
84+
}
8185
}
8286
}
87+
size_t getNumberOfTuples()
88+
{
89+
return m_IndexPtr->getNumberOfTuples();
90+
}
8391

8492
private:
8593
QTextStream& m_Out;
@@ -100,6 +108,10 @@ class NodeWriter
100108
m_Out << index + 1 << delimiter;
101109
m_VertPtr->printTuple(m_Out, index, delimiter);
102110
}
111+
size_t getNumberOfTuples()
112+
{
113+
return m_VertPtr->getNumberOfTuples();
114+
}
103115

104116
private:
105117
QTextStream& m_Out;
@@ -176,17 +188,13 @@ void WriteSingleFileOutput(WriteTriangleGeometry* filter, const QString& outputF
176188

177189
if(selectedArrayPtr->getNumberOfComponents() == 1)
178190
{
179-
outFile << selectedArrayPtr->getName();
191+
outFile << delimiter << selectedArrayPtr->getName();
180192
}
181193
else // There are more than a single component so we need to add multiple header values
182194
{
183195
for(int32_t k = 0; k < selectedArrayPtr->getNumberOfComponents(); ++k)
184196
{
185-
outFile << selectedArrayPtr->getName() << "_" << k;
186-
if(k < selectedArrayPtr->getNumberOfComponents() - 1)
187-
{
188-
outFile << delimiter;
189-
}
197+
outFile << delimiter << selectedArrayPtr->getName() << "_" << k;
190198
}
191199
}
192200
// if(i < dataPaths.size() - 1)
@@ -197,17 +205,19 @@ void WriteSingleFileOutput(WriteTriangleGeometry* filter, const QString& outputF
197205
dataArrays.push_back(selectedArrayPtr);
198206
}
199207
outFile << "\n";
208+
outFile.flush();
200209

201210
// Get the number of tuples in the arrays
202-
size_t numTuples = 0;
203-
if(!dataArrays.empty())
204-
{
205-
numTuples = dataArrays[0]->getNumberOfTuples();
206-
}
211+
// size_t numTuples = 0;
212+
// if(!dataArrays.empty())
213+
// {
214+
// numTuples = dataArrays[0]->getNumberOfTuples();
215+
// }
207216

208217
QString s;
209218
QTextStream out(&s);
210219
WriterType writerType(out, geomDataPtr);
220+
size_t numTuples = writerType.getNumberOfTuples();
211221

212222
float threshold = 0.0f;
213223

@@ -227,6 +237,8 @@ void WriteSingleFileOutput(WriteTriangleGeometry* filter, const QString& outputF
227237
}
228238

229239
writerType.printIndex(i, delimiter);
240+
outFile << s;
241+
s.clear();
230242
// Print a row of data
231243
for(const auto& data : dataArrays)
232244
{
@@ -469,7 +481,7 @@ void WriteTriangleGeometry::execute()
469481
case IGeometry::Type::Quad: {
470482

471483
QuadGeom::Pointer quadGeomPtr = dataContainer->getGeometryAs<QuadGeom>();
472-
headerStrm << "Index" << delimiter << "X" << delimiter << "Y" << delimiter << "Z" << delimiter;
484+
headerStrm << "Index" << delimiter << "X" << delimiter << "Y" << delimiter << "Z";
473485

474486
commentStrm << getCommentMarker() << " All lines starting with '" << getCommentMarker() << "' are comments\n";
475487
commentStrm << getCommentMarker() << " DREAM.3D Nodes file\n";
@@ -484,7 +496,7 @@ void WriteTriangleGeometry::execute()
484496
SharedQuadList::Pointer quadList = quadGeomPtr->getQuads();
485497

486498
header.clear();
487-
headerStrm << "Index" << delimiter << "V1" << delimiter << "V2" << delimiter << "V3" << delimiter << "V4" << delimiter;
499+
headerStrm << "Index" << delimiter << "V1" << delimiter << "V2" << delimiter << "V3" << delimiter << "V4";
488500
comment.clear();
489501
commentStrm << getCommentMarker() << " All lines starting with '" << getCommentMarker() << "' are comments\n";
490502
commentStrm << getCommentMarker() << " DREAM.3D Elements file\n";
@@ -500,7 +512,7 @@ void WriteTriangleGeometry::execute()
500512
}
501513
case IGeometry::Type::Triangle: {
502514
TriangleGeom::Pointer quadGeomPtr = dataContainer->getGeometryAs<TriangleGeom>();
503-
headerStrm << "Index" << delimiter << "X" << delimiter << "Y" << delimiter << "Z" << delimiter;
515+
headerStrm << "Index" << delimiter << "X" << delimiter << "Y" << delimiter << "Z";
504516

505517
commentStrm << getCommentMarker() << " All lines starting with '" << getCommentMarker() << "' are comments\n";
506518
commentStrm << getCommentMarker() << " DREAM.3D Nodes file\n";
@@ -515,7 +527,7 @@ void WriteTriangleGeometry::execute()
515527
SharedQuadList::Pointer quadList = quadGeomPtr->getTriangles();
516528

517529
header.clear();
518-
headerStrm << "Index" << delimiter << "V1" << delimiter << "V2" << delimiter << "V3" << delimiter;
530+
headerStrm << "Index" << delimiter << "V1" << delimiter << "V2" << delimiter << "V3";
519531
comment.clear();
520532
commentStrm << getCommentMarker() << " All lines starting with '" << getCommentMarker() << "' are comments\n";
521533
commentStrm << getCommentMarker() << " DREAM.3D Elements file\n";

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