Eliminate README.md, which was a second source of doc on top of existing.

README.md ignored the existing documentation system in sphix. Folded in most of the important stuff from the .md into the rst docs. Attempted revision of documentation building system by eliminating heavyweight imports from conda.

Author: Eli

.github/workflows/build_sphinx.yml

@@ -18,48 +18,30 @@ jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
       - name: Set up Python 3.10
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: "3.10"
-      - name: Add conda to system path
+      - name: Install pandoc
+        run: sudo apt-get install -y pandoc
+      - name: Install Python dependencies
         run: |
-          echo $CONDA/bin >> $GITHUB_PATH
-      - name: Conda build env for docs
-        shell: bash
-        run: |
-          conda env create --name dms_datastore -f environment.yml
-          source $CONDA/etc/profile.d/conda.sh
-          conda activate dms_datastore
           python -m pip install --upgrade pip
-          pip install -r docsrc/requirements.txt          
+          pip install pandas numpy pyyaml click requests httpx scipy matplotlib xarray tqdm openpyxl lxml
+          pip install -r docsrc/requirements.txt
           pip install --no-deps -e .
-          ghp-import -h
       - name: Build HTML
-        shell: bash
         run: |
-          source $CONDA/etc/profile.d/conda.sh
-          conda activate dms_datastore
           cd docsrc/
-          #sphinx-apidoc --force -o . ../dms_datastore
           make clean
           make html
-          
       - name: Run ghp-import
-        shell: bash
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
-          source $CONDA/etc/profile.d/conda.sh
-          conda activate dms_datastore        
-          ghp-import -h
           git config http.postBuffer 157286400
-          git pull
-          
-          tree -L 3 -a
-          
           ghp-import -n -p -f ./docs/html