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feat: enhance documentation workflow with debugging steps for networkx and update nbsphinx configuration
1 parent 60a104d commit 1ecb2e9

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Lines changed: 37 additions & 3 deletions

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.github/workflows/docs.yml

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@@ -58,10 +58,17 @@ jobs:
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conda activate pydsm-docs
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python -c "import importlib, sphinx, nbsphinx; print('sphinx', sphinx.__version__); print('nbsphinx', nbsphinx.__version__); [importlib.import_module(m) for m in ['pydsm','networkx','pandas','h5py']]; print('Imports OK')"
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- name: Debug networkx available attributes
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run: |
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source $CONDA/etc/profile.d/conda.sh
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conda activate pydsm-docs
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python -c "import networkx as nx; import json; print('networkx version:', nx.__version__); print('Has nx.info?', hasattr(nx,'info')); print('Candidates:', [n for n in dir(nx) if 'info' in n.lower() or 'summary' in n.lower()][:25])"
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- name: Build HTML docs
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working-directory: docsrc
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env:
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NBSPHINX_ALLOW_ERRORS: "0"
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# Set to 1 to allow notebook execution errors without failing build (soft mode)
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NBSPHINX_ALLOW_ERRORS: "1"
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run: |
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source $CONDA/etc/profile.d/conda.sh
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conda activate pydsm-docs

docsrc/conf.py

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@@ -72,7 +72,19 @@
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#
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# This is also used if you do content translation via gettext catalogs.
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# Usually you set "language" from the command line for these cases.
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language = None
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language = "en"
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# nbsphinx configuration (allow CI override with environment variable)
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nbsphinx_allow_errors = os.environ.get("NBSPHINX_ALLOW_ERRORS", "0") in {
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"1",
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"true",
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"True",
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"YES",
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"yes",
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}
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nbsphinx_execute = "auto"
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nbsphinx_timeout = 300 # seconds per cell
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nbsphinx_kernel_name = "python3"
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# List of patterns, relative to source directory, that match files and
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# directories to ignore when looking for source files.

docsrc/notebooks/dsm2_input_network.ipynb

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@@ -245,7 +245,22 @@
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"metadata": {},
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"outputs": [],
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"source": [
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"print(nx.info(gall))"
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"print(f\"Graph type: {type(gall).__name__}\")\n",
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"print(f\"Nodes: {gall.number_of_nodes()} Edges: {gall.number_of_edges()}\")\n",
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"# Degree stats\n",
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"_deg = [d for _, d in gall.degree()]\n",
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"if _deg:\n",
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" print(f\"Degree -> min: {min(_deg)} max: {max(_deg)} avg: {sum(_deg)/len(_deg):.2f}\")\n",
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"# Connected components (for undirected view)\n",
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"try:\n",
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" import networkx as nx\n",
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" if not gall.is_directed():\n",
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" comps = list(nx.connected_components(gall))\n",
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" else:\n",
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" comps = list(nx.weakly_connected_components(gall))\n",
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" print(f\"Components: {len(comps)}\")\n",
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"except Exception as e:\n",
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" print(f\"Component calc skipped: {e}\")"
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]
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},
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{

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