Optimize RAD neighbor search and blocking loop in CodeEntropy pipeline #58

Job	Run time
Pre-commit	1m 8s
Discover regression systems	45s
Unit (ubuntu-24.04, 3.12)	46s
Unit (macos-15, 3.14)	1m 1s
Unit (ubuntu-24.04, 3.14)	56s
Unit (windows-2025, 3.14)	3m 1s
Unit (macos-15, 3.13)	1m 2s
Unit (windows-2025, 3.13)	1m 35s
Unit (windows-2025, 3.12)	1m 34s
Unit (macos-15, 3.12)	50s
Unit (ubuntu-24.04, 3.13)	51s
Docs	59s
Coverage	1m 1s
Regression (fast) • dna	2m 28s
Regression (fast) • benzene	4m 8s
Regression (fast) • benzaldehyde	5m 42s
Regression (fast) • octonol	6m 50s
Regression (fast) • ethyl-acetate	4m 2s
Regression (fast) • methanol	2m 34s
Regression (fast) • methane	2m 12s
Regression (fast) • cyclohexane	5m 38s
Regression (fast) • water	2m 12s
Unit (ubuntu-24.04, 3.12)	46s
Unit (ubuntu-24.04, 3.13)	51s
Pre-commit	1m 8s
Discover regression systems	45s
Unit (macos-15, 3.13)	1m 2s
Unit (ubuntu-24.04, 3.14)	56s
Unit (macos-15, 3.12)	50s
Unit (windows-2025, 3.14)	3m 1s
Unit (windows-2025, 3.12)	1m 34s
Unit (windows-2025, 3.13)	1m 35s
Unit (macos-15, 3.14)	1m 1s
Coverage	1m 1s
Regression (fast) • methane	2m 12s
Regression (fast) • cyclohexane	5m 38s
Docs	59s
Regression (fast) • benzaldehyde	5m 42s
Regression (fast) • benzene	4m 8s
Regression (fast) • dna	2m 28s
Regression (fast) • ethyl-acetate	4m 2s
Regression (fast) • octonol	6m 20s
Regression (fast) • methanol	2m 34s
Regression (fast) • water	2m 12s
	1h 42m 0s

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