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geometric functions
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CodeEntropy/GeometricFunctions.py

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Original file line numberDiff line numberDiff line change
@@ -33,6 +33,11 @@ def get_beads(data_container, level):
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atom_group = "index " + str(atom.index) + " or (name H* and bonded index " + str(atom.index) +")"
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list_of_beads.append(data_container.select_atoms(atom_group))
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#TODO temporary print
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print("list of beads")
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print(level)
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print(list_of_beads)
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return list_of_beads
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#END
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