remove search_object argument from get_grid_neighbors

Author: harryswift01

CodeEntropy/levels/neighbors.py

@@ -132,9 +132,9 @@ def get_symmetry(self, universe, groups):
 
             linear[group_id] = self._get_linear(rdkit_mol, number_heavy)
 
-        logger.debug(
-            f"group: {group_id}, symmetry: {symmetry_number}, linear: {linear}"
-        )
+            logger.debug(
+                f"group: {group_id}, symmetry: {symmetry_number}, linear: {linear}"
+            )
 
         return symmetry_number, linear
 

CodeEntropy/levels/search.py

@@ -186,7 +186,7 @@ def get_distance(self, j_position, i_position, dimensions):
 
         return distance
 
-    def get_grid_neighbors(self, universe, search_object, mol_id, highest_level):
+    def get_grid_neighbors(self, universe, mol_id, highest_level):
         """
         Use MDAnalysis neighbor search to find neighbors.