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Revert "Cdc-ap66_badge_ci_fix (#15)"
This reverts commit a634ee4.
1 parent a634ee4 commit 2a6ef27

3 files changed

Lines changed: 90 additions & 78 deletions

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‎.github/workflows/run_qaqc.yaml‎

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@@ -29,14 +29,32 @@ jobs:
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run: |
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poetry install --no-root --with dev
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poetry run pytest
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badge:
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# only run on pushes to main
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if: ${{ github.event_name == 'push' && github.ref_name == 'main' }}
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name: update coverage badge
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runs-on: ubuntu-latest
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# requires the pytest job above
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needs: tests
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steps:
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- name: Build badge
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if: ${{ github.event_name == 'push' && github.ref_name == 'main' }}
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run: |
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poetry run coverage-badge -f -o docs/assets/badges/coverage.svg
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echo '<!-- timestamp: '"$(date '+%Y-%m-%d %H:%M:%S')"' -->' >> docs/assets/badges/coverage.svg
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git config user.name "${{ github.actor }}"
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git config user.email "${{ github.actor }}@users.noreply.github.com"
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git add docs/assets/badges/coverage.svg
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git commit -m "Update coverage badge"
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git push origin HEAD:${{ github.head_ref }}
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- name: Check-in Coverage Badge
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run: |
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if [ -z "${{ github.head_ref }}" ];
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then
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echo "Not a pull request, skipping badge update."
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exit 0
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else
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git config user.name "${{ github.actor }}"
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git config user.email "${{ github.actor }}@users.noreply.github.com"
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git add docs/assets/badges/coverage.svg
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git commit -m "Update coverage badge"
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git push origin HEAD:${{ github.head_ref }}
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fi

‎changelog.md‎

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@@ -8,12 +8,6 @@ The versioning pattern is `YYYY.MM.DD.micro(a/b/{none if release})
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---
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## [2025.08.14.1a]
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### Fixes
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- Conditional coverage badge update only when pulling to main
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## [2025.08.14.0a]
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- Updates to documentation

‎pyproject.toml‎

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@@ -1,66 +1,66 @@
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[project]
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name = "cfa.dataops"
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version = "2025.08.14.1a"
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description = "Data cataloging, ETL, modeling, verification, and validation for CFA"
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authors = [
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{ name = "Phil Rogers", email = "ap66@cdc.gov" },
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{ name = "Ryan Raasch", email = "xng3@cdc.gov" },
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]
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readme = "README.md"
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requires-python = ">=3.10,<3.11"
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dependencies = [
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"cfa-azure @ git+https://github.com/CDCgov/cfa_azure.git",
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"tomli (>=2.2.1,<3.0.0)",
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"httpx (>=0.28.1,<0.29.0)",
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"mako (>=1.3.9,<2.0.0)",
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"duckdb (>=1.2.0,<2.0.0)",
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"tqdm (>=4.67.1,<5.0.0)",
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"pyarrow (>=19.0.1,<20.0.0)",
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"fastparquet (>=2024.11.0,<2025.0.0)",
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"matplotlib (~=3.9)",
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"pandas (>=2.2.3)",
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"polars (>=1.26.0)",
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"tqdm (>=4.67.0)",
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"altair (>=5.5.0,<6.0.0)",
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"vl-convert-python (>=1.7.0,<2.0.0)",
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"pypdf (>=5.5.0,<6.0.0)",
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"dynode @ git+https://github.com/CDCgov/DynODE@main",
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"pandera[pandas] (>=0.24.0)",
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"papermill (>=2.6.0,<3.0.0)",
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"ipywidgets (>=8.1.7,<9.0.0)",
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"itables (>=2.4.4,<3.0.0)",
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"ipykernel (>=6.30.0,<7.0.0)",
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"nbconvert (>=7.16.6,<8.0.0)",
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"jupyter (>=1.1.1,<2.0.0)",
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"jupyterlab (>=4.4.5,<5.0.0)",
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"rich (>=14.1.0,<15.0.0)",
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]
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[tool.poetry]
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packages = [{ include = "cfa" }]
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[tool.poetry.group.dev.dependencies]
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ruff = "^0.9.9"
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pytest = "^8.3.5"
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pytest-mock = "^3.14.0"
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pytest-cov = "^6.1.1"
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hypothesis = "^6.133.0"
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faker = "^37.3.0"
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coverage-badge = "^1.1.2"
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[tool.poetry.group.mkdocs.dependencies]
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mkdocs = "^1.6.1"
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mkdocs-material = "^9.6.16"
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mkdocstrings = { extras = ["python"], version = "^0.30.0" }
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mdx-truly-sane-lists = "^1.3"
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[build-system]
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requires = ["poetry-core>=2.0.0,<3.0.0"]
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build-backend = "poetry.core.masonry.api"
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[tool.poetry.scripts]
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state_report_pdf = "cfa.dataops.workflows.post_processing.state_report_pdf:main"
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[tool.pytest.ini_options]
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addopts = "--doctest-modules -vv --cov=cfa --cov-report html --cov-report term"
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[project]
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name = "cfa.dataops"
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version = "2025.08.14.0a"
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description = "Data cataloging, ETL, modeling, verification, and validation for CFA"
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authors = [
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{ name = "Phil Rogers", email = "ap66@cdc.gov" },
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{ name = "Ryan Raasch", email = "xng3@cdc.gov" },
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]
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readme = "README.md"
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requires-python = ">=3.10,<3.11"
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dependencies = [
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"cfa-azure @ git+https://github.com/CDCgov/cfa_azure.git",
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"tomli (>=2.2.1,<3.0.0)",
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"httpx (>=0.28.1,<0.29.0)",
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"mako (>=1.3.9,<2.0.0)",
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"duckdb (>=1.2.0,<2.0.0)",
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"tqdm (>=4.67.1,<5.0.0)",
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"pyarrow (>=19.0.1,<20.0.0)",
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"fastparquet (>=2024.11.0,<2025.0.0)",
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"matplotlib (~=3.9)",
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"pandas (>=2.2.3)",
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"polars (>=1.26.0)",
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"tqdm (>=4.67.0)",
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"altair (>=5.5.0,<6.0.0)",
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"vl-convert-python (>=1.7.0,<2.0.0)",
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"pypdf (>=5.5.0,<6.0.0)",
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"dynode @ git+https://github.com/CDCgov/DynODE@main",
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"pandera[pandas] (>=0.24.0)",
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"papermill (>=2.6.0,<3.0.0)",
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"ipywidgets (>=8.1.7,<9.0.0)",
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"itables (>=2.4.4,<3.0.0)",
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"ipykernel (>=6.30.0,<7.0.0)",
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"nbconvert (>=7.16.6,<8.0.0)",
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"jupyter (>=1.1.1,<2.0.0)",
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"jupyterlab (>=4.4.5,<5.0.0)",
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"rich (>=14.1.0,<15.0.0)",
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]
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[tool.poetry]
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packages = [{ include = "cfa" }]
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[tool.poetry.group.dev.dependencies]
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ruff = "^0.9.9"
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pytest = "^8.3.5"
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pytest-mock = "^3.14.0"
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pytest-cov = "^6.1.1"
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hypothesis = "^6.133.0"
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faker = "^37.3.0"
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coverage-badge = "^1.1.2"
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[tool.poetry.group.mkdocs.dependencies]
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mkdocs = "^1.6.1"
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mkdocs-material = "^9.6.16"
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mkdocstrings = { extras = ["python"], version = "^0.30.0" }
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mdx-truly-sane-lists = "^1.3"
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[build-system]
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requires = ["poetry-core>=2.0.0,<3.0.0"]
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build-backend = "poetry.core.masonry.api"
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[tool.poetry.scripts]
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state_report_pdf = "cfa.dataops.workflows.post_processing.state_report_pdf:main"
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[tool.pytest.ini_options]
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addopts = "--doctest-modules -vv --cov=cfa --cov-report html --cov-report term"

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