Merge pull request #64 from hechth/20250716_hechth_tool_additions

added new tools and ran updates

Author: martenson

galaxy-umsa.grid.cesnet.cz/ipapy2.yml

@@ -0,0 +1,18 @@
+tool_panel_section_label: ipapy2
+tools:
+- name: ipapy2_clustering
+  owner: recetox
+- name: ipapy2_compute_all_adducts
+  owner: recetox
+- name: ipapy2_compute_bio
+  owner: recetox
+- name: ipapy2_gibbs_sampler_add
+  owner: recetox
+- name: ipapy2_gibbs_sampler
+  owner: recetox
+- name: ipapy2_map_isotope_patterns
+  owner: recetox
+- name: ipapy2_ms1_annotation
+  owner: recetox
+- name: ipapy2_ms2_annotation
+  owner: recetox

galaxy-umsa.grid.cesnet.cz/ipapy2.yml.lock

@@ -0,0 +1,53 @@
+install_repository_dependencies: true
+install_resolver_dependencies: false
+install_tool_dependencies: false
+tool_panel_section_label: ipapy2
+tools:
+- name: ipapy2_clustering
+  owner: recetox
+  revisions:
+  - cb18b8fcb441
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_compute_all_adducts
+  owner: recetox
+  revisions:
+  - f85a6d4e44b0
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_compute_bio
+  owner: recetox
+  revisions:
+  - ca72f5330bc9
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_gibbs_sampler_add
+  owner: recetox
+  revisions:
+  - 428abc41a101
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_gibbs_sampler
+  owner: recetox
+  revisions:
+  - b2253cf7db76
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_map_isotope_patterns
+  owner: recetox
+  revisions:
+  - 774152f21f29
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_ms1_annotation
+  owner: recetox
+  revisions:
+  - 7f84a8a5edde
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2
+- name: ipapy2_ms2_annotation
+  owner: recetox
+  revisions:
+  - 6a23970e8093
+  tool_panel_section_id: ipapy2
+  tool_panel_section_label: ipapy2

galaxy-umsa.grid.cesnet.cz/pre_processing.yml

@@ -6,3 +6,5 @@ tools:
   owner: recetox
 - name: bioconductor_msnbase_smooth_mz
   owner: recetox
+- name: bioconductor_mzr
+  owner: recetox

galaxy-umsa.grid.cesnet.cz/recetox.yml

@@ -46,3 +46,13 @@ tools:
   owner: recetox
 - name: isolib
   owner: recetox
+- name: wtv
+  owner: recetox
+- name: mzspeclib_convert
+  owner: recetox
+- name: mzspeclib_describe
+  owner: recetox
+- name: mzspeclib_validate
+  owner: recetox
+- name: mztabm_validate
+  owner: recetox