diff --git a/galaxy-umsa.grid.cesnet.cz/post_processing.yml b/galaxy-umsa.grid.cesnet.cz/post_processing.yml deleted file mode 100644 index 35c0507..0000000 --- a/galaxy-umsa.grid.cesnet.cz/post_processing.yml +++ /dev/null @@ -1,4 +0,0 @@ -tool_panel_section_label: Post-processing -tools: -- name: tablemerge - owner: melpetera diff --git a/galaxy-umsa.grid.cesnet.cz/post_processing.yml.lock b/galaxy-umsa.grid.cesnet.cz/post_processing.yml.lock deleted file mode 100644 index 7c8849c..0000000 --- a/galaxy-umsa.grid.cesnet.cz/post_processing.yml.lock +++ /dev/null @@ -1,10 +0,0 @@ -install_repository_dependencies: true -install_resolver_dependencies: false -install_tool_dependencies: false -tools: -- name: tablemerge - owner: melpetera - revisions: - - e44c5246247a - tool_panel_section_id: post_processing - tool_panel_section_label: Post-processing diff --git a/galaxy-umsa.grid.cesnet.cz/recetox.yml.lock b/galaxy-umsa.grid.cesnet.cz/recetox.yml.lock index 14a7c35..cac9a8d 100644 --- a/galaxy-umsa.grid.cesnet.cz/recetox.yml.lock +++ b/galaxy-umsa.grid.cesnet.cz/recetox.yml.lock @@ -45,6 +45,7 @@ tools: - 071a424241ec - 1a2aeb8137bf - 6480c6d5fa36 + - 6fc9f6dbcef5 - bf32ae95a06f tool_panel_section_id: recetox tool_panel_section_label: RECETOX @@ -103,6 +104,7 @@ tools: owner: galaxyp revisions: - 19e45916daf9 + - 5c04f9decc01 tool_panel_section_id: recetox tool_panel_section_label: RECETOX - name: assign_ri_from_comment @@ -160,5 +162,6 @@ tools: owner: recetox revisions: - 2b1118bce0b1 + - 964b4559eb1b tool_panel_section_id: recetox tool_panel_section_label: RECETOX diff --git a/galaxy-umsa.grid.cesnet.cz/visualization.yml b/galaxy-umsa.grid.cesnet.cz/visualization.yml index 40690de..c1691f9 100644 --- a/galaxy-umsa.grid.cesnet.cz/visualization.yml +++ b/galaxy-umsa.grid.cesnet.cz/visualization.yml @@ -14,6 +14,18 @@ tools: owner: iuc - name: ggplot2_point owner: iuc +- name: ggplot2_boxplot + owner: iuc +- name: ggplot2_barplot + owner: iuc +- name: seaborn + owner: iuc +- name: seaborn_pairgrid + owner: iuc +- name: upsetplot + owner: iuc +- name: maplot + owner: iuc - name: rcx_boxplot owner: recetox - name: heatmap diff --git a/galaxy-umsa.grid.cesnet.cz/visualization.yml.lock b/galaxy-umsa.grid.cesnet.cz/visualization.yml.lock index ddf58fa..dcb3d44 100644 --- a/galaxy-umsa.grid.cesnet.cz/visualization.yml.lock +++ b/galaxy-umsa.grid.cesnet.cz/visualization.yml.lock @@ -13,6 +13,7 @@ tools: revisions: - 0e7290688b50 - 17b666467c32 + - 63d211052ffb - dfd5d981b5a4 tool_panel_section_id: visualization tool_panel_section_label: Visualization @@ -20,6 +21,7 @@ tools: owner: iuc revisions: - 10515715c940 + - 15cebddc6dba - 1a72f938213e - 391a4cc45fea tool_panel_section_id: visualization @@ -27,6 +29,7 @@ tools: - name: ggplot2_pca owner: iuc revisions: + - 1df3b30325dd - 7e616a1bdb07 - ae344ccf9d62 - b1268b7544d3 @@ -36,6 +39,7 @@ tools: owner: iuc revisions: - 398e5104f8a2 + - 6b9816a913de - 6fc8bab811da - b0d96516e6a5 tool_panel_section_id: visualization @@ -54,6 +58,43 @@ tools: revisions: - 5298e06f14f9 - e3a675da7fd0 + - f87634b12749 + tool_panel_section_id: visualization + tool_panel_section_label: Visualization +- name: ggplot2_boxplot + owner: iuc + revisions: + - 653803fab921 + tool_panel_section_id: visualization + tool_panel_section_label: Visualization +- name: ggplot2_barplot + owner: iuc + revisions: + - 41e9114cc7cd + tool_panel_section_id: visualization + tool_panel_section_label: Visualization +- name: seaborn + owner: iuc + revisions: + - 293a939f28c8 + tool_panel_section_id: visualization + tool_panel_section_label: Visualization +- name: seaborn_pairgrid + owner: iuc + revisions: + - 4a46d83cb08f + tool_panel_section_id: visualization + tool_panel_section_label: Visualization +- name: upsetplot + owner: iuc + revisions: + - ec6141f6e5cb + tool_panel_section_id: visualization + tool_panel_section_label: Visualization +- name: maplot + owner: iuc + revisions: + - e9212adafd7a tool_panel_section_id: visualization tool_panel_section_label: Visualization - name: rcx_boxplot @@ -72,11 +113,13 @@ tools: owner: workflow4metabolomics revisions: - 51015f22fcb7 + - cbedca3ba6e1 tool_panel_section_id: visualization tool_panel_section_label: Visualization - name: xcms_plot_raw owner: workflow4metabolomics revisions: - 520448a32548 + - 8b8d360316c3 tool_panel_section_id: visualization tool_panel_section_label: Visualization diff --git a/galaxy-umsa.grid.cesnet.cz/w4m.yml b/galaxy-umsa.grid.cesnet.cz/w4m.yml index c4cf8cd..60fdf2d 100644 --- a/galaxy-umsa.grid.cesnet.cz/w4m.yml +++ b/galaxy-umsa.grid.cesnet.cz/w4m.yml @@ -1,10 +1,12 @@ tool_panel_section_label: W4M tools: -- name: xcms_refine - owner: workflow4metabolomics - name: qualitymetrics owner: ethevenot - name: bank_inhouse owner: fgiacomoni - name: batchcorrection owner: melpetera +- name: tablemerge + owner: melpetera +- name: checkformat + owner: ethevenot \ No newline at end of file diff --git a/galaxy-umsa.grid.cesnet.cz/w4m.yml.lock b/galaxy-umsa.grid.cesnet.cz/w4m.yml.lock index cc07b98..83d617f 100644 --- a/galaxy-umsa.grid.cesnet.cz/w4m.yml.lock +++ b/galaxy-umsa.grid.cesnet.cz/w4m.yml.lock @@ -2,13 +2,6 @@ install_repository_dependencies: true install_resolver_dependencies: false install_tool_dependencies: false tools: -- name: xcms_refine - owner: workflow4metabolomics - revisions: - - 090b33a9981c - - 6c2798bce3eb - tool_panel_section_id: w4m - tool_panel_section_label: W4M - name: qualitymetrics owner: ethevenot revisions: @@ -27,3 +20,15 @@ tools: - 23314e1192d4 tool_panel_section_id: w4m tool_panel_section_label: W4M +- name: tablemerge + owner: melpetera + revisions: + - e44c5246247a + tool_panel_section_id: w4m + tool_panel_section_label: W4M +- name: checkformat + owner: ethevenot + revisions: + - e7c5811ec12f + tool_panel_section_id: w4m + tool_panel_section_label: W4M diff --git a/galaxy-umsa.grid.cesnet.cz/xcms.yml b/galaxy-umsa.grid.cesnet.cz/xcms.yml index d0bebff..a04357a 100644 --- a/galaxy-umsa.grid.cesnet.cz/xcms.yml +++ b/galaxy-umsa.grid.cesnet.cz/xcms.yml @@ -18,3 +18,5 @@ tools: owner: lecorguille - name: xcms_export_samplemetadata owner: lecorguille +- name: xcms_refine + owner: workflow4metabolomics diff --git a/galaxy-umsa.grid.cesnet.cz/xcms.yml.lock b/galaxy-umsa.grid.cesnet.cz/xcms.yml.lock index 2d528eb..8c1a6e3 100644 --- a/galaxy-umsa.grid.cesnet.cz/xcms.yml.lock +++ b/galaxy-umsa.grid.cesnet.cz/xcms.yml.lock @@ -74,3 +74,10 @@ tools: - e13c7bc91c63 tool_panel_section_id: xcms tool_panel_section_label: XCMS +- name: xcms_refine + owner: workflow4metabolomics + revisions: + - 090b33a9981c + - 6c2798bce3eb + tool_panel_section_id: xcms + tool_panel_section_label: XCMS