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starting with sparse 0.18 tocsr() may return an array instead of a matrix
1 parent 33e7bac commit 5a6d536

2 files changed

Lines changed: 9 additions & 6 deletions

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climada/hazard/test/test_xarray.py

Lines changed: 8 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -28,7 +28,7 @@
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import numpy as np
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import xarray as xr
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from pyproj import CRS
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from scipy.sparse import csr_matrix
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from scipy.sparse import csr_array, csr_matrix
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from climada.hazard.base import Hazard
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from climada.util.constants import DEF_CRS
@@ -104,8 +104,8 @@ def _assert_default_types(self, hazard):
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self.assertIsInstance(hazard.event_id, np.ndarray)
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self.assertIsInstance(hazard.event_name, list)
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self.assertIsInstance(hazard.frequency, np.ndarray)
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self.assertIsInstance(hazard.intensity, csr_matrix)
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self.assertIsInstance(hazard.fraction, csr_matrix)
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self.assertIsInstance(hazard.intensity, csr_matrix | csr_array)
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self.assertIsInstance(hazard.fraction, csr_matrix | csr_array)
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self.assertIsInstance(hazard.date, np.ndarray)
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def test_load_path(self):
@@ -149,8 +149,11 @@ def _load_and_assert(**kwargs):
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def test_type_error(self):
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"""Calling 'from_xarray_raster' with wrong data type should throw"""
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# Passing a DataArray
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with xr.open_dataset(self.netcdf_path) as dset, self.assertRaisesRegex(
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TypeError, "This method only supports passing xr.Dataset"
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with (
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xr.open_dataset(self.netcdf_path) as dset,
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self.assertRaisesRegex(
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TypeError, "This method only supports passing xr.Dataset"
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),
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):
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Hazard.from_xarray_raster(dset["intensity"], "", "")
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climada/hazard/xarray.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -58,7 +58,7 @@ def _to_csr_matrix(array: xr.DataArray) -> sparse.csr_matrix:
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output_dtypes=[array.dtype],
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)
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sparse_coo = array.compute().data # Load into memory
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return sparse_coo.tocsr() # Convert sparse.COO to scipy.sparse.csr_matrix
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return sparse_coo.tocsr() # Convert sparse.COO to scipy.sparse.csr_array
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# Define accessors for xarray DataArrays

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