add fPIC to jellyfish flags

Rob Patro · Rob Patro · commit baada582f47d · 2016-09-24T17:26:18.000-04:00
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
@@ -88,6 +88,7 @@ target_link_libraries(rapmap
     ${SUFFARRAY64_LIB}
     ${GAT_SOURCE_DIR}/external/install/lib/libjellyfish-2.0.a
     m
+    pthread
     ${LIBLZMA_LIBRARIES}
     ${NON_APPLECLANG_LIBS}
     ${FAST_MALLOC_LIB}

Original file line number	Diff line number	Diff line change
`@@ -88,6 +88,7 @@ target_link_libraries(rapmap`
`88`	`88`	`${SUFFARRAY64_LIB}`
`89`	`89`	`${GAT_SOURCE_DIR}/external/install/lib/libjellyfish-2.0.a`
`90`	`90`	`m`
	`91`	`+ pthread`
`91`	`92`	`${LIBLZMA_LIBRARIES}`
`92`	`93`	`${NON_APPLECLANG_LIBS}`
`93`	`94`	`${FAST_MALLOC_LIB}`