prep for 0.1.0 release

Author: pcahan1

DESCRIPTION

@@ -0,0 +1,62 @@
+# ────────────── build backend ──────────────
+[build-system]
+requires = [
+  "setuptools>=68",      # modern PEP 621 support
+  "wheel",
+  "setuptools-scm>=8"    # derive version from Git tags
+]
+build-backend = "setuptools.build_meta"
+
+# ────────────── project metadata (PEP 621) ──────────────
+[project]
+name = "pySingleCellNet"
+dynamic = ["version"]          # setuptools-scm will fill this in
+description = "Single-cell classification and analysis, optimized for embryonic and fetal development"
+readme = "README.md"
+requires-python = ">=3.9"
+license = {text = "MIT"}
+
+authors = [
+  {name = "Patrick Cahan", email = "patrick.cahan@gmail.com"},
+  {name = "Yuqi Tan",       email = "ytan19@jhmi.edu"}
+]
+
+# Runtime dependencies (same list you had in setup.py; keep them lowercase & PEP 440 compliant)
+dependencies = [
+  "pandas",
+  "numpy",
+  "scikit-learn",
+  "scanpy",
+  "statsmodels",
+  "scipy",
+  "matplotlib",
+  "seaborn",
+  "umap-learn",
+  "mygene",
+  "palettable",
+  "gseapy",
+  "alive_progress",
+  "python-igraph",
+  "marsilea"
+]
+
+[project.urls]
+Documentation = "https://pysinglecellnet.readthedocs.io/en/latest/"
+Source        = "https://github.com/CahanLab/PySingleCellNet"
+Issues        = "https://github.com/CahanLab/PySingleCellNet/issues"
+
+# ────────────── setuptools-specific settings ──────────────
+[tool.setuptools]
+package-dir = {"" = "src"}              # tells setuptools to look in src/
+# auto-discover everything under src/  (same behaviour as find_packages())
+packages = ["pySingleCellNet"]
+
+# Alternative: use the finder (uncomment if you prefer)
+# [tool.setuptools.packages.find]
+# where = ["src"]
+# exclude = ["tests*"]
+
+# ────────────── setuptools-scm tweaks (optional) ──────────────
+[tool.setuptools_scm]
+version_scheme = "post-release"         # 0.3.0 → 0.3.1.devN after the tag
+local_scheme   = "no-local"             # omit +g<hash> in wheels uploaded to PyPI