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MAINT: Clean up some doc refs (mne-tools#14014)
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doc/sphinxext/related_software.py

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"Home-page": "https://github.com/freesurfer/surfa",
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"Summary": "Utilities for medical image and surface processing.",
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},
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# This package does not provide wheels, so don't force CircleCI to build it.
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# If it eventually provides binary wheels we could add it to
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# `tools/circleci_dependencies.sh` and remove from here.
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# https://github.com/Eelbrain/Eelbrain/issues/130
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"eelbrain": {
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"Home-page": "https://eelbrain.readthedocs.io/en/stable/",
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"Summary": "Open-source Python toolkit for MEG and EEG data analysis.",
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},
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# TODO: these do not set a valid homepage or documentation page on PyPI
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"mffpy": {
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"Home-page": "https://github.com/BEL-Public/mffpy",
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"Summary": "Reader and Writer for Philips' MFF file format.",
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},
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# not on PyPI
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"conpy": {
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"Home-page": "https://github.com/aaltoimaginglanguage/conpy",

doc/sphinxext/related_software.txt

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curryreader
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dcm2niix
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eeg_positions
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eelbrain
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emd
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fooof
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hedtools
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meegkit
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meggie
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mffpy
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mne-ari
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mne-bids-pipeline
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mne-denoise

tools/circleci_dependencies.sh

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set -x
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python -m pip install --upgrade "pip>=25.1" build
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# rpy2 3.6.7 (or its deps) cause problems with our installed R version, so pin them
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# also install colormath because it doesn't have a binary wheel
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python -m pip install --upgrade --only-binary=numpy,scipy \
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"rpy2==3.6.6" "rpy2-rinterface==3.6.5" "rpy2-robjects==3.6.4" mne-ari
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"rpy2==3.6.6" "rpy2-rinterface==3.6.5" "rpy2-robjects==3.6.4" mne-ari colormath
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python -m pip install --upgrade --only-binary=:all: \
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-ve .[full-pyside6] \
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--group=test \

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