We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
There was an error while loading. Please reload this page.
1 parent c020728 commit 23ab07eCopy full SHA for 23ab07e
1 file changed
README.md
@@ -23,7 +23,7 @@ The following README will focus mainly on `fasticlip`. The pdf in the repository
23
Usage
24
-----
25
26
-`fasticlip [-h] -i INPUT [INPUT ...] [--trimmed] [--hg19 | --mm9] -s STAR_INDEX -n NAME -o OUTPUT [-f N] [-a ADAPTER] [-tr REPEAT_THRESHOLD_RULE] [-tn NONREPEAT_THRESHOLD_RULE] [-m MAPQ] [-q Q] [-p P] [-l L]`
+`fasticlip [-h] -i INPUT [INPUT ...] [--trimmed] [--hg19 | --mm9] -s STAR_INDEX -n NAME -o OUTPUT [-f N] [-a ADAPTER] [-tr REPEAT_THRESHOLD_RULE] [-tn NONREPEAT_THRESHOLD_RULE] [-m MAPQ] [-q Q] [-p P] [-l L] [--verbose]`
27
28
Example: `fasticlip -i rawdata/example_MMhur_R1.fastq rawdata/example_MMhur_R2.fastq --mm9 -s /seq/STAR/indexes/mm9 -n MMhur -o results`
29
0 commit comments