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fix: include CCO/Arctic Sun temps in aline_vitals
Co-authored-by: Cursor <cursoragent@cursor.com>
1 parent 1fe4366 commit 0d80d2b

1 file changed

Lines changed: 3 additions & 2 deletions

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mimic-iii/notebooks/aline/aline_vitals.sql

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -10,13 +10,13 @@ with vitals_stg0 as
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, case
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-- MAP, Temperature, HR, CVP, SpO2,
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when itemid in (456,52,6702,443,220052,220181,225312) then 'MAP'
13-
when itemid in (223762,676,223761,678) then 'Temperature'
13+
when itemid in (223762,676,223761,678,226329,227632,227634) then 'Temperature'
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when itemid in (211,220045) then 'HeartRate'
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when itemid in (646,220277) then 'SpO2'
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else null end as label
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, case when itemid in (223761,678) and ((valuenum-32)/1.8)<10 then null
19-
when itemid in (223762,676) and valuenum < 10 then null
19+
when itemid in (223762,676,226329,227632,227634) and valuenum < 10 then null
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-- convert F to C
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when itemid in (223761,678) then (valuenum-32)/1.8
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-- sanity checks on data - one outliter with spo2 < 25
@@ -32,6 +32,7 @@ with vitals_stg0 as
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(
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456,52,6702,443,220052,220181,225312 -- map
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, 223762,676,223761,678 -- temp
35+
, 226329,227632,227634 -- CCO / Arctic Sun temp (C)
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, 211,220045 -- hr
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, 646,220277 -- spo2
3738
)

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