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test_dipole.py
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218 lines (197 loc) · 6.03 KB
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# SPDX-License-Identifier: LGPL-3.0-or-later
import unittest
from typing import (
Any,
)
import numpy as np
from deepmd.dpmodel.model.dipole_model import DipoleModel as DipoleModelDP
from deepmd.dpmodel.model.model import get_model as get_model_dp
from deepmd.env import (
GLOBAL_NP_FLOAT_PRECISION,
)
from ..common import (
INSTALLED_JAX,
INSTALLED_PT,
INSTALLED_TF,
CommonTest,
)
from .common import (
ModelTest,
)
if INSTALLED_PT:
from deepmd.pt.model.model import get_model as get_model_pt
from deepmd.pt.model.model.dipole_model import DipoleModel as DipoleModelPT
else:
DipoleModelPT = None
if INSTALLED_TF:
from deepmd.tf.model.tensor import DipoleModel as DipoleModelTF
else:
DipoleModelTF = None
if INSTALLED_JAX:
from deepmd.jax.model.dipole_model import DipoleModel as DipoleModelJAX
from deepmd.jax.model.model import get_model as get_model_jax
else:
DipoleModelJAX = None
from deepmd.utils.argcheck import (
model_args,
)
class TestDipole(CommonTest, ModelTest, unittest.TestCase):
@property
def data(self) -> dict:
return {
"type_map": ["O", "H"],
"descriptor": {
"type": "se_e2_a",
"sel": [20, 20],
"rcut_smth": 1.8,
"rcut": 6.0,
"neuron": [2, 4, 8],
"resnet_dt": False,
"axis_neuron": 8,
"precision": "float64",
"type_one_side": True,
"seed": 1,
},
"fitting_net": {
"type": "dipole",
"neuron": [4, 4, 4],
"resnet_dt": True,
"numb_fparam": 0,
"precision": "float64",
"seed": 1,
},
}
tf_class = DipoleModelTF
dp_class = DipoleModelDP
pt_class = DipoleModelPT
jax_class = DipoleModelJAX
args = model_args()
atol = 1e-8
def get_reference_backend(self):
"""Get the reference backend.
We need a reference backend that can reproduce forces.
"""
if not self.skip_pt:
return self.RefBackend.PT
if not self.skip_tf:
return self.RefBackend.TF
if not self.skip_dp:
return self.RefBackend.DP
raise ValueError("No available reference")
@property
def skip_tf(self):
return not INSTALLED_TF
@property
def skip_jax(self) -> bool:
return not INSTALLED_JAX
def pass_data_to_cls(self, cls, data) -> Any:
"""Pass data to the class."""
data = data.copy()
if cls is DipoleModelDP:
return get_model_dp(data)
elif cls is DipoleModelPT:
model = get_model_pt(data)
model.atomic_model.out_bias.uniform_()
return model
elif cls is DipoleModelJAX:
return get_model_jax(data)
return cls(**data, **self.additional_data)
def setUp(self) -> None:
CommonTest.setUp(self)
self.ntypes = 2
self.coords = np.array(
[
12.83,
2.56,
2.18,
12.09,
2.87,
2.74,
00.25,
3.32,
1.68,
3.36,
3.00,
1.81,
3.51,
2.51,
2.60,
4.27,
3.22,
1.56,
],
dtype=GLOBAL_NP_FLOAT_PRECISION,
).reshape(1, -1, 3)
self.atype = np.array([0, 1, 1, 0, 1, 1], dtype=np.int32).reshape(1, -1)
self.box = np.array(
[13.0, 0.0, 0.0, 0.0, 13.0, 0.0, 0.0, 0.0, 13.0],
dtype=GLOBAL_NP_FLOAT_PRECISION,
).reshape(1, 9)
self.natoms = np.array([6, 6, 2, 4], dtype=np.int32)
# TF requires the atype to be sort
idx_map = np.argsort(self.atype.ravel())
self.atype = self.atype[:, idx_map]
self.coords = self.coords[:, idx_map]
def build_tf(self, obj: Any, suffix: str) -> tuple[list, dict]:
return self.build_tf_model(
obj,
self.natoms,
self.coords,
self.atype,
self.box,
suffix,
ret_key="dipole",
)
def eval_dp(self, dp_obj: Any) -> Any:
return self.eval_dp_model(
dp_obj,
self.natoms,
self.coords,
self.atype,
self.box,
)
def eval_pt(self, pt_obj: Any) -> Any:
return self.eval_pt_model(
pt_obj,
self.natoms,
self.coords,
self.atype,
self.box,
)
def eval_jax(self, jax_obj: Any) -> Any:
return self.eval_jax_model(
jax_obj,
self.natoms,
self.coords,
self.atype,
self.box,
)
def extract_ret(self, ret: Any, backend) -> tuple[np.ndarray, ...]:
# shape not matched. ravel...
if backend in {self.RefBackend.DP, self.RefBackend.JAX}:
return (
ret["dipole_redu"].ravel(),
ret["dipole"].ravel(),
)
elif backend is self.RefBackend.PT:
return (
ret["global_dipole"].ravel(),
ret["dipole"].ravel(),
)
elif backend is self.RefBackend.TF:
return (
ret[0].ravel(),
ret[1].ravel(),
)
raise ValueError(f"Unknown backend: {backend}")
def test_atom_exclude_types(self):
if self.skip_pt:
self.skipTest("Unsupported backend")
if self.skip_tf:
self.skipTest("Unsupported backend")
_ret, data = self.get_reference_ret_serialization(self.RefBackend.PT)
data["atom_exclude_types"] = [1]
self.reset_unique_id()
tf_obj = self.tf_class.deserialize(data, suffix=self.unique_id)
pt_obj = self.pt_class.deserialize(data)
self.assertEqual(tf_obj.get_sel_type(), pt_obj.get_sel_type())