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Pull requests: Clinical-Genomics/oncorefiner

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Pull requests list

feat: Add SNV variant scoring
#103 opened May 13, 2026 by beatrizsavinhas Contributor • Draft
2
fix: move filtering and vep arguments to params
#101 opened May 13, 2026 by kristinebilgrav Contributor Loading…
19
fix: Template update for nf-core/tools v4.0.2
#100 opened May 13, 2026 by beatrizsavinhas Contributor Loading…
29
feat: Add VCF_ANNOTATE_SCORE_GENMOD to PROCESS_SNVS
#97 opened May 12, 2026 by beatrizsavinhas Contributor • Draft
2
fix: Update publishing strategy for PROCESS_SVS
#93 opened May 7, 2026 by beatrizsavinhas Contributor • Draft
2
feat: add cnv report
#91 opened May 5, 2026 by fevac Collaborator • Draft
5
feat: Add markdown script for CNV report generation
#89 opened May 5, 2026 by fevac Collaborator Loading…
14
docs: Update contributing guidelines in CONTRIBUTING.md
#88 opened May 4, 2026 by beatrizsavinhas Contributor • Draft
2
fix: vep args keep unannotated
#84 opened Apr 27, 2026 by mathiasbio Contributor • Draft
1
2
fix: update publishing strategy
#81 opened Apr 27, 2026 by kristinebilgrav Contributor • Draft
5
feat: made all steps optional
#47 opened Mar 11, 2026 by fevac Collaborator • Draft
3
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