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Fix: rename /ontology/v3.5/ → /ontology/v3.5-alpha3/, purge all v3.5 references
There is no v3.5 release. Only v3.4 (stable) and two alphas (alpha-3, alpha-6). - Renamed folder: public/ontology/v3.5 → public/ontology/v3.5-alpha3 - Fixed all links in: config.mts, v3.4 pages, v3.5-alpha3 pages, ontology index files - Removed v3.5 and v3.4 standalone nav links (version switcher handles navigation) - Zero remaining references to /ontology/v3.5/ or /v3.5/ in source
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‎docs/.vitepress/components/OntologyGraph.vue‎

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‎docs/.vitepress/config.mts‎

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@@ -21,15 +21,13 @@ export default withMermaid(defineConfig({
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siteTitle: 'Concept Kernel',
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nav: [
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{ text: 'v3.5', link: '/v3.5-alpha6/' },
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{ text: 'v3.4', link: '/v3.4/introduction' },
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{
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text: 'Ontology',
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items: [
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{ text: 'Browse Ontology', link: '/browse/' },
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{ text: 'v3.5-alpha6 (TTL)', link: '/ontology/v3.5-alpha6/' },
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{ text: 'v3.5 alpha-3 (TTL)', link: '/ontology/v3.5-alpha6/' },
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{ text: 'v3.4 stable (TTL)', link: '/ontology/v3.4/' },
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{ text: 'v3.5-alpha3 (TTL)', link: '/ontology/v3.5-alpha3/' },
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{ text: 'v3.4 (TTL)', link: '/ontology/v3.4/' },
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]
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},
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{

‎docs/public/ontology/v3.4/index.html‎

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<body>
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<div class="header">
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<span class="title"><a href="https://conceptkernel.org">Concept Kernel Protocol</a></span>
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<span><a href="https://conceptkernel.org/ontology/v3.5/">v3.5 (alpha)</a></span>
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<span><a href="https://conceptkernel.org/ontology/v3.5-alpha3/">v3.5 (alpha)</a></span>
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</div>
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<div class="container">
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@@ -43,7 +43,7 @@ <h1>CKP Ontology v3.4 <span class="status">Stable</span></h1>
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<dt>This version</dt>
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<dd><a href="https://conceptkernel.org/ontology/v3.4/">https://conceptkernel.org/ontology/v3.4/</a></dd>
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<dt>Latest version</dt>
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<dd><a href="https://conceptkernel.org/ontology/v3.5/">https://conceptkernel.org/ontology/v3.5/</a> (alpha-3)</dd>
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<dd><a href="https://conceptkernel.org/ontology/v3.5-alpha3/">https://conceptkernel.org/ontology/v3.5-alpha3/</a> (alpha-3)</dd>
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<dt>Namespace URI</dt>
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<dd><code>https://conceptkernel.org/ontology/v3.4/</code></dd>
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<dt>Editors</dt>

docs/public/ontology/v3.5/base-instances.ttl renamed to docs/public/ontology/v3.5-alpha3/base-instances.ttl

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docs/public/ontology/v3.5/core.ttl renamed to docs/public/ontology/v3.5-alpha3/core.ttl

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docs/public/ontology/v3.5/index.html renamed to docs/public/ontology/v3.5-alpha3/index.html

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@@ -43,11 +43,11 @@ <h1>CKP Ontology v3.5 <span class="status status-alpha">Alpha-4</span></h1>
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<dl class="meta">
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<dt>This version</dt>
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<dd><a href="https://conceptkernel.org/ontology/v3.5/">https://conceptkernel.org/ontology/v3.5/</a></dd>
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<dd><a href="https://conceptkernel.org/ontology/v3.5-alpha3/">https://conceptkernel.org/ontology/v3.5-alpha3/</a></dd>
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<dt>Previous version</dt>
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<dd><a href="https://conceptkernel.org/ontology/v3.4/">https://conceptkernel.org/ontology/v3.4/</a> (stable)</dd>
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<dt>Namespace URI</dt>
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<dd><code>https://conceptkernel.org/ontology/v3.5/</code></dd>
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<dd><code>https://conceptkernel.org/ontology/v3.5-alpha3/</code></dd>
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<dt>Status</dt>
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<dd>Alpha-4 — extends v3.4 with base instance shapes, materialised proof, governance vocabulary, PROV-O provenance</dd>
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<dt>Editors</dt>
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<dd><a href="https://github.com/ConceptKernel/conceptkernel.github.io">GitHub</a></dd>
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</dl>
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<div class="prefix-box">@prefix ckp: &lt;https://conceptkernel.org/ontology/v3.5/&gt; .</div>
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<div class="prefix-box">@prefix ckp: &lt;https://conceptkernel.org/ontology/v3.5-alpha3/&gt; .</div>
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<h2>Abstract</h2>
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<p class="abstract">v3.5 extends the CKP ontology with base instance shapes inherited by all kernels, a materialised proof model with SHA-256 hash verification, PROV-O aligned provenance properties, and the kernel-as-datatype rule — every kernel's <code>ontology.yaml</code> is its type definition, and every instance is a typed individual. The ontology governs the tool, not the reverse.</p>
@@ -86,7 +86,7 @@ <h2>v3.5 Additions</h2>
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<tr><td>Action Class</td><td>core.ttl</td><td><code>ckp:Action</code> (BFO Process) — every kernel exposes typed actions with access levels.</td></tr>
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<tr><td>Edge Predicates</td><td>core.ttl</td><td>EXTENDS, COMPOSES, TRIGGERS — governance-loop relationship types for edges.</td></tr>
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<tr><td>PROV-O Integration</td><td>base-instances.ttl</td><td>PROV-O aligned provenance: <code>wasGeneratedBy</code>, <code>wasAttributedTo</code>, <code>generatedAtTime</code>.</td></tr>
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<tr><td>Namespace Convergence</td><td>all</td><td>Three legacy namespaces unified to <code>https://conceptkernel.org/ontology/v3.5/</code></td></tr>
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<tr><td>Namespace Convergence</td><td>all</td><td>Three legacy namespaces unified to <code>https://conceptkernel.org/ontology/v3.5-alpha3/</code></td></tr>
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</table>
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<h2>Supporting Files</h2>
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<h2>Namespaces</h2>
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<table>
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<tr><th>Prefix</th><th>URI</th></tr>
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<tr><td><code>ckp:</code></td><td><code>https://conceptkernel.org/ontology/v3.5/</code></td></tr>
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<tr><td><code>ckpp:</code></td><td><code>https://conceptkernel.org/ontology/v3.5/process/</code></td></tr>
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<tr><td><code>ckpr:</code></td><td><code>https://conceptkernel.org/ontology/v3.5/relation/</code></td></tr>
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<tr><td><code>ckpw:</code></td><td><code>https://conceptkernel.org/ontology/v3.5/workflow/</code></td></tr>
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<tr><td><code>ckpi:</code></td><td><code>https://conceptkernel.org/ontology/v3.5/improvement/</code></td></tr>
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<tr><td><code>ckp:</code></td><td><code>https://conceptkernel.org/ontology/v3.5-alpha3/</code></td></tr>
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<tr><td><code>ckpp:</code></td><td><code>https://conceptkernel.org/ontology/v3.5-alpha3/process/</code></td></tr>
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<tr><td><code>ckpr:</code></td><td><code>https://conceptkernel.org/ontology/v3.5-alpha3/relation/</code></td></tr>
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<tr><td><code>ckpw:</code></td><td><code>https://conceptkernel.org/ontology/v3.5-alpha3/workflow/</code></td></tr>
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<tr><td><code>ckpi:</code></td><td><code>https://conceptkernel.org/ontology/v3.5-alpha3/improvement/</code></td></tr>
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</table>
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<h2>PROV-O Integration</h2>

docs/public/ontology/v3.5/index.json renamed to docs/public/ontology/v3.5-alpha3/index.json

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"draft": "ALPHA",
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"date": "2026-03-25",
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"description": "Formal ontology mapping ConceptKernel architecture to Basic Formal Ontology (BFO)",
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"baseUri": "https://conceptkernel.org/ontology/v3.5/",
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"baseUri": "https://conceptkernel.org/ontology/v3.5-alpha3/",
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"bfoVersion": "2020",
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"bfoUri": "http://purl.obolibrary.org/obo/bfo.owl"
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},
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"v3.5": {
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"date": "2026-03-25",
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"changes": [
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"Unified all namespaces under https://conceptkernel.org/ontology/v3.5/ (was mixed http/https unversioned)",
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"Unified all namespaces under https://conceptkernel.org/ontology/v3.5-alpha3/ (was mixed http/https unversioned)",
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"NEW: base-instances.ttl — InstanceManifest, SealedInstance, LedgerEntry (SPEC.CKP.v3.5.alpha-3 Section 4.1)",
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"NEW: proof.ttl — ProofRecord, ProofCheck, ProofOutcome, CheckType for verifiable instance integrity",
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"Updated schema.yaml with LinkML classes for InstanceManifest, SealedInstance, LedgerEntry, ProofRecord, ProofCheck",

docs/public/ontology/v3.5/kernel-entity-template.ttl renamed to docs/public/ontology/v3.5-alpha3/kernel-entity-template.ttl

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docs/public/ontology/v3.5/kernel-metadata.ttl renamed to docs/public/ontology/v3.5-alpha3/kernel-metadata.ttl

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docs/public/ontology/v3.5/processes.ttl renamed to docs/public/ontology/v3.5-alpha3/processes.ttl

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