liana

Author: jsnagai

pycrosstalker/tools/utils.py

@@ -714,8 +714,8 @@ def from_liana(adata, liana_key = "liana", score_key="lr_means",pval_key="cellph
 
     if isinstance(adata.uns[liana_key], pd.DataFrame):
         if condition_key in adata.uns[liana_key].columns:
-            for i in adata.uns[liana_key].label.unique():
-                evfull = adata.uns[liana_key].loc[adata.uns[liana_key].label==i,:]
+            for i in adata.uns[liana_key][condition_key].unique():
+                evfull = adata.uns[liana_key].loc[adata.uns[liana_key][condition_key]==i,:]
                 evfull = evfull.loc[:,sel]
                 evfull['type_gene_A'] = 'Ligand'
                 evfull['type_gene_B'] = 'Receptor'
@@ -749,3 +749,5 @@ def from_liana(adata, liana_key = "liana", score_key="lr_means",pval_key="cellph
             adata.uns['pycrosstalker']['path'][i] = evfull
     return (adata.copy())
 
+
+

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "pycrosstalker"
-version = "2.1.5rc"
+version = "2.1.6"
 description = ""
 authors = [
     { name = "jsnagai", email = "james.nagai@gmail.com" },