rgt-TDF problem

[Charbelfeg]

Hello,

I am trying to install TDF, however i am facing the following issue after running rgt-TDF promotertest

rgt-TDF promotertest
Traceback (most recent call last):
File "/home/charbel/miniconda3/envs/bioinfo/bin/rgt-TDF", line 5, in
from rgt.tdf.Main import main
File "/home/charbel/miniconda3/envs/bioinfo/lib/python3.6/site-packages/rgt/tdf/Main.py", line 12, in
matplotlib.use('Agg', warn=False)
TypeError: use() got an unexpected keyword argument 'warn'
(bioinfo)

Any ideas how to resolve this please?

Thanks a lot

[chaochungkuo]

Hi, TDF wasn't updated for some years. It is very likely that your matplotlib version is too new. Please try to downgrade your matplotlib. *Joseph Chao-Chung Kuo* Dr. Chao-Chung Kuo Genomics Facility, IZKF Aachen, RWTH Aachen University Phone: +49 241 80 35296 e-mail: ***@***.*** Web: genomics.rwth-aachen.de Am Do., 26. Sept. 2024 um 14:26 Uhr schrieb Charbelfeg < ***@***.***>:

…

Hello, I am trying to install TDF, however i am facing the following issue after running rgt-TDF promotertest rgt-TDF promotertest Traceback (most recent call last): File "/home/charbel/miniconda3/envs/bioinfo/bin/rgt-TDF", line 5, in from rgt.tdf.Main import main File "/home/charbel/miniconda3/envs/bioinfo/lib/python3.6/site-packages/rgt/tdf/Main.py", line 12, in matplotlib.use('Agg', warn=False) TypeError: use() got an unexpected keyword argument 'warn' (bioinfo) Any ideas how to resolve this please? Thanks a lot — Reply to this email directly, view it on GitHub <#284>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABUGJIWJ5H76DYVIZKJU64DZYP4OFAVCNFSM6AAAAABO44ZBEOVHI2DSMVQWIX3LMV43ASLTON2WKOZSGU2TANBTGQZDKOA> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>