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us.gcr.io/broad-dsp-gcr-public/terra-jupyter-hail:latest and us.gcr.io/broad-dsp-gcr-public/terra-jupyter-aou:latest pyspark dependency issue

Status: Open.

#506 In DataBiosphere/terra-docker;

· andrewjordank opened on Jun 19, 2025

cmake not available but present in the Dockerfile?

Status: Open.

#478 In DataBiosphere/terra-docker;

· AMCalejandro opened on Feb 28, 2024

Unable to build terra-docker-r image

Status: Open.

#477 In DataBiosphere/terra-docker;

· AMCalejandro opened on Feb 28, 2024

terra-jupyter-base should preserve /home/jupyter contents and environment variables such as PATH

Status: Open.

#471 In DataBiosphere/terra-docker;

· droazen opened on Nov 3, 2023

terra-jupyter-base should allow non-sudo/root use of conda

Status: Open.

#470 In DataBiosphere/terra-docker;

· droazen opened on Nov 3, 2023

The terra-jupyter-gatk image is not compatible with GATK

Status: Open.

#464 In DataBiosphere/terra-docker;

· droazen opened on Oct 24, 2023

Using Hail with dsub

Status: Open.

#440 In DataBiosphere/terra-docker;

· buutrg opened on Jul 14, 2023

Running terra-jupyter-r locally on gcp vm

Status: Open.

#435 In DataBiosphere/terra-docker;

· MiTPenguin opened on Jun 28, 2023

update of Cromshell causes failed build in terra-jupyter-base

Status: Open.

#377 In DataBiosphere/terra-docker;

· HBBOUWMAN opened on Dec 7, 2022

Easy method to shrink size of terra-jupyter-r

Status: Open.

#352 In DataBiosphere/terra-docker;

· sjfleming opened on Sep 10, 2022

Shrink size of terra-jupyter-base

Status: Open.

#333 In DataBiosphere/terra-docker;

· SHuang-Broad opened on Jun 15, 2022

Adding PLINKv1.9 and PLINKv2.0

Status: Open.

#283 In DataBiosphere/terra-docker;

· m-makarious opened on Dec 16, 2021