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dlc_processor.py
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632 lines (539 loc) · 23.3 KB
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"""DLCLive integration helpers."""
# dlclivegui/services/dlc_processor.py
from __future__ import annotations
import logging
import queue
import threading
import time
from collections import deque
from contextlib import contextmanager
from dataclasses import dataclass
from enum import Enum, auto
from typing import Any
import numpy as np
from PySide6.QtCore import QObject, Signal
from dlclivegui.config import DLCProcessorSettings, ModelType
from dlclivegui.processors.processor_utils import instantiate_from_scan
from dlclivegui.temp import Engine # type: ignore # TODO use main package enum when released
logger = logging.getLogger(__name__)
try: # pragma: no cover - optional dependency
from dlclive import (
DLCLive, # type: ignore
)
except Exception as e: # pragma: no cover - handled gracefully
logger.error(f"dlclive package could not be imported: {e}")
DLCLive = None # type: ignore[assignment]
# Enable profiling to get more detailed timing metrics for debugging and optimization.
ENABLE_PROFILING = True
class PoseBackends(Enum):
DLC_LIVE = auto()
class WorkerState(Enum):
STOPPED = auto()
STARTING = auto()
RUNNING = auto()
STOPPING = auto()
FAULTED = auto()
@dataclass
class PoseResult:
pose: np.ndarray | None
timestamp: float
packet: PosePacket | None = None
@dataclass(slots=True, frozen=True)
class PoseSource:
backend: PoseBackends # e.g. "DLCLive"
model_type: ModelType | None = None
@dataclass(slots=True, frozen=True)
class PosePacket:
schema_version: int = 0
keypoints: np.ndarray | None = None
keypoint_names: list[str] | None = None
individual_ids: list[str] | None = None
source: PoseSource = PoseSource(backend=PoseBackends.DLC_LIVE)
raw: Any | None = None
def validate_pose_array(pose: Any, *, source_backend: PoseBackends = PoseBackends.DLC_LIVE) -> np.ndarray:
"""
Validate pose output shape and dtype.
Accepted runner output shapes:
- (K, 3): single-animal
- (N, K, 3): multi-animal
"""
try:
arr = np.asarray(pose)
except Exception as exc:
raise ValueError(
f"{source_backend} returned an invalid pose output format: could not convert to array ({exc})"
) from exc
if arr.ndim not in (2, 3):
raise ValueError(
f"{source_backend} returned an invalid pose output format:"
f" expected a 2D or 3D array, got ndim={arr.ndim}, shape={arr.shape!r}"
)
if arr.shape[-1] != 3:
raise ValueError(
f"{source_backend} returned an invalid pose output format:"
f" expected last dimension size 3 (x, y, likelihood), got shape={arr.shape!r}"
)
if arr.ndim == 2 and arr.shape[0] <= 0:
raise ValueError(f"{source_backend} returned an invalid pose output format: expected at least one keypoint")
if arr.ndim == 3 and (arr.shape[0] <= 0 or arr.shape[1] <= 0):
raise ValueError(
f"{source_backend} returned an invalid pose output format:"
f" expected at least one individual and one keypoint, got shape={arr.shape!r}"
)
if not np.issubdtype(arr.dtype, np.number):
raise ValueError(
f"{source_backend} returned an invalid pose output format: expected numeric values, got dtype={arr.dtype}"
)
return arr
@dataclass
class ProcessorStats:
"""Statistics for DLC processor performance."""
frames_enqueued: int = 0
frames_processed: int = 0
frames_dropped: int = 0
queue_size: int = 0
processing_fps: float = 0.0
average_latency: float = 0.0
last_latency: float = 0.0
# Profiling metrics
avg_queue_wait: float = 0.0
avg_inference_time: float = 0.0
avg_signal_emit_time: float = 0.0
avg_total_process_time: float = 0.0
# Separated timing for GPU vs socket processor
avg_gpu_inference_time: float = 0.0 # Pure model inference
avg_processor_overhead: float = 0.0 # Socket processor overhead
class DLCLiveProcessor(QObject):
"""Background pose estimation using DLCLive with queue-based threading."""
pose_ready = Signal(object)
error = Signal(str)
initialized = Signal(bool)
frame_processed = Signal()
def __init__(self) -> None:
super().__init__()
# DLCLive instance and config
self._settings = DLCProcessorSettings()
self._dlc: Any | None = None
self._processor: Any | None = None
# Worker thread and queue
self._queue: queue.Queue[Any] | None = None
self._worker_thread: threading.Thread | None = None
self._state = WorkerState.STOPPED
self._lifecycle_lock = threading.Lock()
self._stop_event = threading.Event()
self._initialized = False
# Statistics tracking
self._frames_enqueued = 0
self._frames_processed = 0
self._frames_dropped = 0
self._latencies: deque[float] = deque(maxlen=60)
self._processing_times: deque[float] = deque(maxlen=60)
self._stats_lock = threading.Lock()
# Profiling metrics
self._queue_wait_times: deque[float] = deque(maxlen=60)
self._inference_times: deque[float] = deque(maxlen=60)
self._signal_emit_times: deque[float] = deque(maxlen=60)
self._total_process_times: deque[float] = deque(maxlen=60)
self._gpu_inference_times: deque[float] = deque(maxlen=60)
self._processor_overhead_times: deque[float] = deque(maxlen=60)
@staticmethod
def get_model_backend(model_path: str) -> Engine:
return Engine.from_model_path(model_path)
def configure(self, settings: DLCProcessorSettings, processor: Any | None = None) -> None:
self._settings = settings
self._processor = processor
def reset(self) -> None:
"""Stop the worker thread and drop the current DLCLive instance."""
stopped = self._stop_worker()
if not stopped:
logger.warning(
"Reset requested but worker thread is still alive; skipping DLCLive reset to avoid potential issues."
)
return
self._dlc = None
self._initialized = False
with self._stats_lock:
self._frames_enqueued = 0
self._frames_processed = 0
self._frames_dropped = 0
self._latencies.clear()
self._processing_times.clear()
self._queue_wait_times.clear()
self._inference_times.clear()
self._signal_emit_times.clear()
self._total_process_times.clear()
self._gpu_inference_times.clear()
self._processor_overhead_times.clear()
def shutdown(self) -> None:
stopped = self._stop_worker()
if not stopped:
logger.warning(
"Shutdown requested but worker thread is still alive; DLCLive instance may not be fully released."
)
return
self._dlc = None
self._initialized = False
def enqueue_frame(self, frame: np.ndarray, timestamp: float) -> None:
# Keep lifecycle lock held only for quick state checks and snapshots.
with self._lifecycle_lock:
if self._state in (WorkerState.STOPPING, WorkerState.FAULTED) or self._stop_event.is_set():
return
t = self._worker_thread
q = self._queue
should_start = t is None or not t.is_alive()
frame_c = frame.copy()
enq_time = time.perf_counter()
if should_start:
# Re-acquire the lifecycle lock to safely (re)start the worker if needed.
with self._lifecycle_lock:
# Re-check state in case it changed while we were copying the frame.
if self._state in (WorkerState.STOPPING, WorkerState.FAULTED) or self._stop_event.is_set():
return
t = self._worker_thread
if t is None or not t.is_alive():
# _start_worker_locked expects the lifecycle lock to be held.
self._start_worker_locked(frame_c, timestamp)
return
# Worker is now running; refresh queue snapshot.
q = self._queue
if q is None:
return
try:
q.put_nowait((frame_c, timestamp, enq_time))
with self._stats_lock:
self._frames_enqueued += 1
except queue.Full:
with self._stats_lock:
self._frames_dropped += 1
def get_stats(self) -> ProcessorStats:
"""Get current processing statistics."""
queue_size = self._queue.qsize() if self._queue is not None else 0
with self._stats_lock:
avg_latency = sum(self._latencies) / len(self._latencies) if self._latencies else 0.0
last_latency = self._latencies[-1] if self._latencies else 0.0
# Compute processing FPS from processing times
if len(self._processing_times) >= 2:
duration = self._processing_times[-1] - self._processing_times[0]
processing_fps = (len(self._processing_times) - 1) / duration if duration > 0 else 0.0
else:
processing_fps = 0.0
# Profiling metrics
avg_queue_wait = (
sum(self._queue_wait_times) / len(self._queue_wait_times) if self._queue_wait_times else 0.0
)
avg_inference = sum(self._inference_times) / len(self._inference_times) if self._inference_times else 0.0
avg_signal_emit = (
sum(self._signal_emit_times) / len(self._signal_emit_times) if self._signal_emit_times else 0.0
)
avg_total = (
sum(self._total_process_times) / len(self._total_process_times) if self._total_process_times else 0.0
)
avg_gpu = (
sum(self._gpu_inference_times) / len(self._gpu_inference_times) if self._gpu_inference_times else 0.0
)
avg_proc_overhead = (
sum(self._processor_overhead_times) / len(self._processor_overhead_times)
if self._processor_overhead_times
else 0.0
)
return ProcessorStats(
frames_enqueued=self._frames_enqueued,
frames_processed=self._frames_processed,
frames_dropped=self._frames_dropped,
queue_size=queue_size,
processing_fps=processing_fps,
average_latency=avg_latency,
last_latency=last_latency,
avg_queue_wait=avg_queue_wait,
avg_inference_time=avg_inference,
avg_signal_emit_time=avg_signal_emit,
avg_total_process_time=avg_total,
avg_gpu_inference_time=avg_gpu,
avg_processor_overhead=avg_proc_overhead,
)
def _start_worker_locked(self, init_frame: np.ndarray, init_timestamp: float) -> None:
# lifecycle_lock must already be held
if self._worker_thread is not None and self._worker_thread.is_alive():
return
self._queue = queue.Queue(maxsize=1)
self._stop_event.clear()
self._state = WorkerState.STARTING
self._worker_thread = threading.Thread(
target=self._worker_loop,
args=(init_frame, init_timestamp),
name="DLCLiveWorker",
daemon=True,
)
self._worker_thread.start()
def _start_worker(self, init_frame: np.ndarray, init_timestamp: float) -> None:
with self._lifecycle_lock:
self._start_worker_locked(init_frame, init_timestamp)
def _stop_worker(self) -> bool:
with self._lifecycle_lock:
t = self._worker_thread
if t is None:
self._state = WorkerState.STOPPED
self._stop_event.clear()
return True
self._state = WorkerState.STOPPING
self._stop_event.set()
t.join(timeout=2.0)
if t.is_alive():
qsize = self._queue.qsize() if self._queue is not None else -1
logger.warning("DLC worker thread did not terminate cleanly (qsize=%s)", qsize)
with self._lifecycle_lock:
self._state = WorkerState.FAULTED
return False
with self._lifecycle_lock:
self._worker_thread = None
self._queue = None
self._state = WorkerState.STOPPED
self._stop_event.clear()
return True
@contextmanager
def _timed_processor(self):
"""
If a socket processor is attached, temporarily wrap its .process()
to measure processor overhead time independently of GPU inference.
Yields a one-element list [processor_overhead_seconds] or None when no processor.
Always restores the original .process reference.
"""
if self._processor is None:
yield None
return
original = self._processor.process
holder = [0.0]
def timed_process(pose, _op=original, _holder=holder, **kwargs):
start = time.perf_counter()
try:
return _op(pose, **kwargs)
finally:
_holder[0] = time.perf_counter() - start
self._processor.process = timed_process
try:
yield holder
finally:
# Restore even if inference/errors occur
self._processor.process = original
def _process_frame(
self,
frame: np.ndarray,
timestamp: float,
enqueue_time: float,
*,
queue_wait_time: float = 0.0,
) -> None:
"""
Single source of truth for: inference -> (optional) processor timing -> signal emit -> stats.
Updates: frames_processed, latency, processing timeline, profiling metrics.
"""
if self._dlc is None:
raise RuntimeError("DLCLive instance is not initialized.")
# Time GPU inference (and processor overhead when present)
with self._timed_processor() as proc_holder:
inference_start = time.perf_counter()
raw_pose: Any = self._dlc.get_pose(frame, frame_time=timestamp)
inference_time = time.perf_counter() - inference_start
pose_arr: np.ndarray = validate_pose_array(raw_pose, source_backend=PoseBackends.DLC_LIVE)
pose_packet = PosePacket(
schema_version=0,
keypoints=pose_arr,
keypoint_names=None,
individual_ids=None,
source=PoseSource(backend=PoseBackends.DLC_LIVE, model_type=self._settings.model_type),
raw=raw_pose,
)
processor_overhead = 0.0
gpu_inference_time = inference_time
if proc_holder is not None:
processor_overhead = proc_holder[0]
gpu_inference_time = max(0.0, inference_time - processor_overhead)
# Emit pose (measure signal overhead)
signal_start = time.perf_counter()
self.pose_ready.emit(PoseResult(pose=pose_packet.keypoints, timestamp=timestamp, packet=pose_packet))
signal_time = time.perf_counter() - signal_start
end_ts = time.perf_counter()
latency = end_ts - enqueue_time
# service_time_no_queue = signal_time + inference_time (includes processor overhead when present)
# Actual end-to-end time from enqueue to signal emit
total_process_time = end_ts - enqueue_time
with self._stats_lock:
self._frames_processed += 1
self._latencies.append(latency)
self._processing_times.append(end_ts)
if ENABLE_PROFILING:
self._queue_wait_times.append(queue_wait_time)
self._inference_times.append(inference_time)
self._signal_emit_times.append(signal_time)
self._total_process_times.append(total_process_time)
self._gpu_inference_times.append(gpu_inference_time)
self._processor_overhead_times.append(processor_overhead)
self.frame_processed.emit()
def _worker_loop(self, init_frame: np.ndarray, init_timestamp: float) -> None:
try:
# -------- Initialization (unchanged) --------
if not self._settings.model_path:
raise RuntimeError("No DLCLive model path configured.")
init_start = time.perf_counter()
dyn = self._settings.dynamic
if not isinstance(dyn, (list, tuple)) or len(dyn) != 3:
try:
dyn = dyn.to_tuple()
except Exception as e:
raise RuntimeError("Invalid dynamic crop settings format.") from e
enabled, margin, max_missing = dyn
options = {
"model_path": self._settings.model_path,
"model_type": self._settings.model_type,
"processor": self._processor,
"dynamic": [enabled, margin, max_missing],
"resize": self._settings.resize,
"precision": self._settings.precision,
"single_animal": self._settings.single_animal,
}
if self._settings.device is not None:
options["device"] = self._settings.device
try:
if DLCLive is None:
raise RuntimeError(
"DLCLive class is not available. Ensure the dlclive package is installed and can be imported."
)
self._dlc = DLCLive(**options)
except Exception as exc:
with self._lifecycle_lock:
self._state = WorkerState.FAULTED
raise RuntimeError(
f"Failed to initialize DLCLive with model '{self._settings.model_path}': {exc}"
) from exc
# First inference to initialize
init_inference_start = time.perf_counter()
self._dlc.init_inference(init_frame)
init_inference_time = time.perf_counter() - init_inference_start
# Pass DLCLive cfg to processor if available
if hasattr(self._dlc, "processor") and hasattr(self._dlc.processor, "set_dlc_cfg"):
self._dlc.processor.set_dlc_cfg(getattr(self._dlc, "cfg", None))
self._initialized = True
self.initialized.emit(True)
with self._lifecycle_lock:
self._state = WorkerState.RUNNING
total_init_time = time.perf_counter() - init_start
logger.info(
"DLCLive model initialized successfully (total: %.3fs, init_inference: %.3fs)",
total_init_time,
init_inference_time,
)
# Emit pose for init frame & update stats (not dequeued)
self._process_frame(init_frame, init_timestamp, time.perf_counter(), queue_wait_time=0.0)
with self._stats_lock:
self._frames_enqueued += 1
except Exception as exc:
logger.exception("Failed to initialize DLCLive", exc_info=exc)
with self._lifecycle_lock:
self._state = WorkerState.FAULTED
self.error.emit(str(exc))
self.initialized.emit(False)
return
q = (
self._queue
) # Assign to local to avoid issues if self._queue is set to None during shutdown while loop is still running.
if q is None:
logger.warning("Worker started without a queue; exiting")
with self._lifecycle_lock:
self._state = WorkerState.FAULTED
self.error.emit("Worker started without a queue")
return
# -------- Main processing loop: stop-flag + timed get + drain --------
# NOTE: We never exit early unless _stop_event is set.
while True:
# If stop requested, only exit when queue is empty
if self._stop_event.is_set():
if q is not None:
try:
frame, ts, enq = q.get_nowait()
except queue.Empty:
# NOW it is safe to exit
break
else:
# Still work to do, process one
try:
self._process_frame(frame, ts, enq, queue_wait_time=0.0)
except Exception as exc:
logger.exception("Pose inference failed", exc_info=exc)
self.error.emit(str(exc))
finally:
try:
q.task_done()
except ValueError:
pass
continue # check stop_event again WITHOUT breaking
# Normal operation: timed get
try:
wait_start = time.perf_counter()
item = q.get(timeout=0.05)
queue_wait_time = time.perf_counter() - wait_start
except queue.Empty:
continue
except Exception as exc:
logger.exception("Error getting item from queue", exc_info=exc)
with self._lifecycle_lock:
self._state = WorkerState.FAULTED
self.error.emit(str(exc))
break
try:
frame, ts, enq = item
self._process_frame(frame, ts, enq, queue_wait_time=queue_wait_time)
except Exception as exc:
logger.exception("Pose inference failed", exc_info=exc)
self.error.emit(str(exc))
finally:
try:
q.task_done()
except ValueError:
pass
logger.info("DLC worker thread exiting")
class DLCService:
"""Wrap DLCLiveProcessor lifecycle & configuration."""
def __init__(self):
self._proc = DLCLiveProcessor()
self.active = False
self._last_pose: PoseResult | None = None
self._processor_info = None
@property
def processor(self):
return self._proc._processor
# Expose key signals (to let MainWindow connect easily)
@property
def pose_ready(self):
return self._proc.pose_ready
@property
def error(self):
return self._proc.error
@property
def initialized(self):
return self._proc.initialized
def enqueue(self, frame, ts):
self._proc.enqueue_frame(frame, ts)
def configure(self, settings: DLCProcessorSettings, scanned_processors: dict, selected_key) -> bool:
with self._proc._lifecycle_lock:
if self._proc._state != WorkerState.STOPPED:
raise RuntimeError("Cannot configure DLCLiveProcessor while it is running. Please stop it first.")
processor = None
if selected_key is not None and scanned_processors:
try:
processor = instantiate_from_scan(scanned_processors, selected_key)
except Exception as exc:
logger.error("Failed to instantiate processor: %s", exc)
return False
self._proc.configure(settings, processor=processor)
return True
def start(self):
self._proc.reset()
self.active = True
def stop(self):
self.active = False
self._proc.reset()
self._last_pose = None
def stats(self) -> ProcessorStats:
return self._proc.get_stats()
def last_pose(self) -> PoseResult | None:
return self._last_pose