wrong ids

Author: stephen-riggs

tests/workflows/sxt/test_process_sxt_tilt_series.py

@@ -59,23 +59,23 @@ def set_up_db(murfey_db_session: Session):
             "pj_id": aretomo_pj_entry.id,
         },
     )
-    get_or_create_db_entry(
+    imod_autoproc_entry = get_or_create_db_entry(
         murfey_db_session,
         AutoProcProgram,
         lookup_kwargs={
             "id": 1,
             "pj_id": imod_pj_entry.id,
         },
     )
-    return dcg_entry.id, dc_entry.id, imod_pj_entry.id, aretomo_autoproc_entry.id
+    return dcg_entry.id, dc_entry.id, aretomo_autoproc_entry.id, imod_autoproc_entry.id
 
 
 @mock.patch("murfey.workflows.sxt.process_sxt_tilt_series._transport_object")
 def test_process_new_sxt_tilt_series(
     mock_transport, murfey_db_session: Session, tmp_path
 ):
     """Run the picker feedback with less particles than needed for classification"""
-    dcg_id, dc_id, pj_id, app_id = set_up_db(murfey_db_session)
+    dcg_id, dc_id, app_id_aretomo, app_id_imod = set_up_db(murfey_db_session)
 
     new_parameters = process_sxt_tilt_series.SXTTiltSeriesInfo(
         session_id=ExampleVisit.murfey_session_id,
@@ -105,7 +105,7 @@ def test_process_new_sxt_tilt_series(
                 "txrm_file": f"{tmp_path}/cm12345-6/raw/tomogram_tag.txrm",
                 "xrm_reference": f"{tmp_path}/cm12345-6/raw/ref.xrm",
                 "dcid": dc_id,
-                "appid": app_id,
+                "appid": app_id_aretomo,
                 "stack_file": f"{tmp_path}/cm12345-6/processed/tomogram_tag/sxt-aretomo/Tomograms/tomogram_tag_stack.mrc",
                 "tilt_axis": 0,
                 "pixel_size": 100,
@@ -123,7 +123,7 @@ def test_process_new_sxt_tilt_series(
                 "txrm_file": f"{tmp_path}/cm12345-6/raw/tomogram_tag.txrm",
                 "xrm_reference": f"{tmp_path}/cm12345-6/raw/ref.xrm",
                 "dcid": dc_id,
-                "appid": app_id,
+                "appid": app_id_imod,
                 "stack_file": f"{tmp_path}/cm12345-6/processed/tomogram_tag/sxt-imod-patch-wbp/Tomograms/tomogram_tag_stack.mrc",
                 "tilt_axis": 0,
                 "pixel_size": 100,