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Back-populate bfactor table into processing job #821

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Merged
stephen-riggs merged 3 commits into from
Jun 12, 2026
+10 −0
Merged

Back-populate bfactor table into processing job #821

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f6b852b
Back-populate bfactor table into processing job
stephen-riggs Jun 12, 2026
d55ee94
Found another one
stephen-riggs Jun 12, 2026
7cbe2b2
And the other way
stephen-riggs Jun 12, 2026
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10 changes: 10 additions & 0 deletions src/murfey/util/db.py
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Original file line number Diff line number Diff line change
Expand Up @@ -379,6 +379,12 @@ class ProcessingJob(SQLModel, table=True): # type: ignore
refine3ds: List["Refine3D"] = Relationship(
back_populates="processing_job", sa_relationship_kwargs={"cascade": "delete"}
)
bfactor_parameters: List["BFactorParameters"] = Relationship(
back_populates="processing_job", sa_relationship_kwargs={"cascade": "delete"}
)
bfactors: List["BFactors"] = Relationship(
back_populates="processing_job", sa_relationship_kwargs={"cascade": "delete"}
)


class PreprocessStash(SQLModel, table=True): # type: ignore
Expand Down Expand Up @@ -810,13 +816,17 @@ class BFactorParameters(SQLModel, table=True): # type: ignore
class_number: int
mask_file: str
run: bool = True
processing_job: Optional[ProcessingJob] = Relationship(
back_populates="bfactor_parameters"
)


class BFactors(SQLModel, table=True): # type: ignore
bfactor_directory: str = Field(primary_key=True)
pj_id: int = Field(primary_key=True, foreign_key="processingjob.processingJobId")
number_of_particles: int
resolution: float
processing_job: Optional[ProcessingJob] = Relationship(back_populates="bfactors")


class MotionCorrection(SQLModel, table=True): # type: ignore
Expand Down